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4YVB
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BU of 4yvb by Molmil
Structure of D128N streptavidin
分子名称: BIOTIN, Streptavidin
著者Baugh, L, Le Trong, I, Stayton, P.S, Stenkamp, R.E, Lybrand, T.P.
登録日2015-03-19
公開日2016-03-23
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.351 Å)
主引用文献A Streptavidin Binding Site Mutation Yields an Unexpected Result
To Be Published
3MG5
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BU of 3mg5 by Molmil
Core-streptavidin mutant F130L in complex with biotin
分子名称: BIOTIN, GLYCEROL, Streptavidin
著者Le Trong, I, Baugh, L, Stayton, P.S, Lybrand, T.P, Stenkamp, R.E.
登録日2010-04-05
公開日2010-05-26
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献A distal point mutation in the streptavidin-biotin complex preserves structure but diminishes binding affinity: experimental evidence of electronic polarization effects?
Biochemistry, 49, 2010
4GD9
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BU of 4gd9 by Molmil
Circular Permuted Streptavidin N49/G48
分子名称: BIOTIN, SULFATE ION, Streptavidin
著者Le Trong, I, Chu, V, Xing, Y, Lybrand, T.P, Stayton, P.S, Stenkamp, R.E.
登録日2012-07-31
公開日2013-06-05
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural consequences of cutting a binding loop: two circularly permuted variants of streptavidin.
Acta Crystallogr.,Sect.D, 69, 2013
4GDA
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BU of 4gda by Molmil
Circular Permuted Streptavidin A50/N49
分子名称: BIOTIN, ETHANOL, GLYCEROL, ...
著者Le Trong, I, Chu, V, Xing, Y, Lybrand, T.P, Stayton, P.S, Stenkamp, R.E.
登録日2012-07-31
公開日2013-06-05
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Structural consequences of cutting a binding loop: two circularly permuted variants of streptavidin.
Acta Crystallogr.,Sect.D, 69, 2013
3RY2
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BU of 3ry2 by Molmil
Wild-type core streptavidin-biotin complex at atomic resolution
分子名称: BIOTIN, GLYCEROL, Streptavidin
著者Stenkamp, R.E, Le Trong, I, Stayton, P.S, Lybrand, T.P.
登録日2011-05-10
公開日2011-08-24
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献Streptavidin and its biotin complex at atomic resolution.
Acta Crystallogr.,Sect.D, 67, 2011
3T6F
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BU of 3t6f by Molmil
Biotin complex of Y54F core streptavidin
分子名称: BIOTIN, BIOTIN-D-SULFOXIDE, GLYCEROL, ...
著者Baugh, L, Le Trong, I, Cerutti, D.S, Mehta, N, Gulich, S, Stayton, P.S, Stenkamp, R.E, Lybrand, T.P.
登録日2011-07-28
公開日2011-12-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Second-Contact Shell Mutation Diminishes Streptavidin-Biotin Binding Affinity through Transmitted Effects on Equilibrium Dynamics.
Biochemistry, 51, 2012
3T6L
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BU of 3t6l by Molmil
Y54F mutant of core streptavidin
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Streptavidin
著者Baugh, L, Le Trong, I, Stayton, P.S, Stenkamp, R.E, Lybrand, T.P.
登録日2011-07-28
公開日2011-12-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Second-Contact Shell Mutation Diminishes Streptavidin-Biotin Binding Affinity through Transmitted Effects on Equilibrium Dynamics.
Biochemistry, 51, 2012
3RY1
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BU of 3ry1 by Molmil
Wild-type core streptavidin at atomic resolution
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, Streptavidin
著者Stenkamp, R.E, Wang, Z, Le Trong, I, Stayton, P.S, Lybrand, T.P.
登録日2011-05-10
公開日2011-08-24
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.03 Å)
主引用文献Streptavidin and its biotin complex at atomic resolution.
Acta Crystallogr.,Sect.D, 67, 2011
7UCR
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BU of 7ucr by Molmil
Joint X-ray/neutron structure of the Sarcin-Ricin loop RNA
分子名称: SULFATE ION, Sarcin-Ricin loop RNA
著者Harp, J.M, Egli, M.E, Pallan, P.S, Coates, L.
登録日2022-03-17
公開日2022-07-20
最終更新日2024-04-03
実験手法NEUTRON DIFFRACTION (1 Å), X-RAY DIFFRACTION
主引用文献Cryo neutron crystallography demonstrates influence of RNA 2'-OH orientation on conformation, sugar pucker and water structure.
Nucleic Acids Res., 50, 2022
8SV4
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BU of 8sv4 by Molmil
7-Deazapurines and 5-Halogenpyrimidine DNA duplex
分子名称: 1,2-ETHANEDIOL, 2-[2-(2-ethoxyethoxy)ethoxy]ethanol, ACETATE ION, ...
著者Pallan, P.S, Egli, M.
登録日2023-05-15
公開日2023-10-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Conformational Morphing by a DNA Analogue Featuring 7-Deazapurines and 5-Halogenpyrimidines and the Origins of Adenine-Tract Geometry.
Biochemistry, 62, 2023
8SV3
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BU of 8sv3 by Molmil
7-Deazapurines and 5-Halogenpyrimidine DNA duplex
分子名称: GLYCEROL, MAGNESIUM ION, Modified DNA, ...
著者Pallan, P.S, Egli, M.
登録日2023-05-15
公開日2023-10-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Conformational Morphing by a DNA Analogue Featuring 7-Deazapurines and 5-Halogenpyrimidines and the Origins of Adenine-Tract Geometry.
Biochemistry, 62, 2023
7JJE
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BU of 7jje by Molmil
Sarcin-ricin loop with guanosine dithiophosphate residue.
分子名称: RNA (27-MER)
著者Pallan, P.S, Egli, M, Harp, J.M.
登録日2020-07-25
公開日2020-12-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Incorporating a Thiophosphate Modification into a Common RNA Tetraloop Motif Causes an Unanticipated Stability Boost.
Biochemistry, 59, 2020
7JJF
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BU of 7jjf by Molmil
Sarcin-ricin loop with modified residue.
分子名称: MAGNESIUM ION, RNA/DNA (27-mer)
著者Harp, J.M, Pallan, P.S, Egli, M.
登録日2020-07-25
公開日2020-12-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Incorporating a Thiophosphate Modification into a Common RNA Tetraloop Motif Causes an Unanticipated Stability Boost.
Biochemistry, 59, 2020
7JJD
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BU of 7jjd by Molmil
Sarcin-ricin loop with guanosine monothiophosphate residue.
分子名称: RNA (27-MER)
著者Pallan, P.S, Egli, M, Harp, J.M.
登録日2020-07-25
公開日2020-12-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.21 Å)
主引用文献Incorporating a Thiophosphate Modification into a Common RNA Tetraloop Motif Causes an Unanticipated Stability Boost.
Biochemistry, 59, 2020
5DO4
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BU of 5do4 by Molmil
Thrombin-RNA aptamer complex
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Pallan, P.S, Egli, M.
登録日2015-09-10
公開日2016-09-14
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.859 Å)
主引用文献Evoking picomolar binding in RNA by a single phosphorodithioate linkage.
Nucleic Acids Res., 44, 2016
1SWT
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BU of 1swt by Molmil
CORE-STREPTAVIDIN MUTANT D128A IN COMPLEX WITH BIOTIN AT PH 4.5
分子名称: BIOTIN, PROTEIN (STREPTAVIDIN)
著者Freitag, S, Le Trong, I, Chu, V, Klumb, L.A, Stayton, P.S, Stenkamp, R.E.
登録日1998-10-22
公開日1999-07-30
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A structural snapshot of an intermediate on the streptavidin-biotin dissociation pathway.
Proc.Natl.Acad.Sci.USA, 96, 1999
1SWS
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BU of 1sws by Molmil
CORE-STREPTAVIDIN MUTANT D128A AT PH 4.5
分子名称: PROTEIN (STREPTAVIDIN)
著者Freitag, S, Chu, V, Le Trong, I, Klumb, L.A, To, R, Stayton, P.S, Stenkamp, R.E.
登録日1998-10-22
公開日1999-07-30
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A structural snapshot of an intermediate on the streptavidin-biotin dissociation pathway.
Proc.Natl.Acad.Sci.USA, 96, 1999

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件を2024-11-06に公開中

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