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2N2C
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BU of 2n2c by Molmil
NMR Structure of TDP-43 prion-like hydrophobic helix in DPC
分子名称: TAR DNA-binding protein 43
著者Lim, L, Song, J.
登録日2015-05-06
公開日2015-12-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献ALS-causing mutations significantly perturb the self-assembly and interaction with nucleic acid of the intrinsically-disordered prion-like domain of TDP-43
To be Published
2MP3
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BU of 2mp3 by Molmil
Truncated L126Z-sod1 in DPC micelle
分子名称: Superoxide dismutase [Cu-Zn]
著者Lim, L, Song, J.
登録日2014-05-10
公開日2015-05-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Mechanism for transforming cytosolic SOD1 into integral membrane proteins of organelles by ALS-causing mutations
Biochim.Biophys.Acta, 1848, 2015
2NAM
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BU of 2nam by Molmil
Full-length WT SOD1 in DPC MICELLE
分子名称: Superoxide dismutase [Cu-Zn]
著者Lim, L, Song, J.
登録日2016-01-06
公開日2016-12-14
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献SALS-linked WT-SOD1 adopts a highly similar helical conformation as FALS-causing L126Z-SOD1 in a membrane environment
Biochim.Biophys.Acta, 1858, 2016
2I0K
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BU of 2i0k by Molmil
Cholesterol Oxidase from Brevibacterium sterolicum- His121Ala Mutant
分子名称: CACODYLATE ION, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
著者Vrielink, A, Lim, L.
登録日2006-08-10
公開日2007-12-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural and kinetic analyses of the H121A mutant of cholesterol oxidase.
Biochem.J., 400, 2006
8ESI
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BU of 8esi by Molmil
Bile Salt Hydrolase from B. longum with covalent inhibitor bound
分子名称: (1R,3aS,3bR,5aR,7R,9aS,9bS,11aR)-1-[(2R)-6-fluoro-5-oxohexan-2-yl]-9a,11a-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-7-yl hydrogen sulfate (non-preferred name), Conjugated bile acid hydrolase
著者Walker, M.E, Lim, L, Redinbo, M.R.
登録日2022-10-14
公開日2023-11-01
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural diversity of bile salt hydrolases reveals rationale for substrate selectivity
To Be Published
1BF4
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BU of 1bf4 by Molmil
CHROMOSOMAL DNA-BINDING PROTEIN SSO7D/D(GCGAACGC) COMPLEX
分子名称: DNA (5'-D(*GP*CP*GP*AP*AP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*TP*5IUP*CP*GP*C)-3'), PROTEIN (CHROMOSOMAL PROTEIN SSO7D)
著者Su, S, Gao, Y.-G, Robinson, H, Padmanabhan, S, Lim, L, Shriver, J.W, Wang, A.H.-J.
登録日1998-05-27
公開日1999-11-10
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The crystal structure of the hyperthermophile chromosomal protein Sso7d bound to DNA.
Nat.Struct.Biol., 5, 1998
1BNZ
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BU of 1bnz by Molmil
SSO7D HYPERTHERMOPHILE PROTEIN/DNA COMPLEX
分子名称: 5'-D(*GP*TP*AP*AP*TP*TP*AP*C)-3', DNA-BINDING PROTEIN 7A
著者Gao, Y.-G, Su, S.-Y, Robinson, H, Padmanabhan, S, Lim, L, Mccrary, B.S, Edmondos, S.P, Shrive, J.W, Wang, A.H.-J.
登録日1998-07-31
公開日1998-11-11
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The crystal structure of the hyperthermophile chromosomal protein Sso7d bound to DNA.
Nat.Struct.Biol., 5, 1998
1CF4
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BU of 1cf4 by Molmil
CDC42/ACK GTPASE-BINDING DOMAIN COMPLEX
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, PROTEIN (ACTIVATED P21CDC42HS KINASE), ...
著者Mott, H.R, Owen, D, Nietlispach, D, Lowe, P.N, Lim, L, Laue, E.D.
登録日1999-03-23
公開日1999-06-18
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Structure of the small G protein Cdc42 bound to the GTPase-binding domain of ACK.
Nature, 399, 1999
2MDK
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BU of 2mdk by Molmil
NMR Solution Structure of MSP-P56S Domain/VAPB in DPC
分子名称: Vesicle-associated membrane protein-associated protein B/C
著者Qin, H, Lim, L, Song, J.
登録日2013-09-11
公開日2013-10-30
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献MSP-P56S Domain, VAPB in DPC
To be Published
2MBE
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BU of 2mbe by Molmil
Backbone 1H and 15N Chemical Shift Assignments for the first domain of FAT10
分子名称: Ubiquitin D
著者Wang, W, Lim, L, Qin, H.
登録日2013-07-30
公開日2014-08-27
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Disruption of FAT10-MAD2 binding inhibits tumor progression.
Proc.Natl.Acad.Sci.USA, 111, 2014
3RTP
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BU of 3rtp by Molmil
Design and synthesis of brain penetrant selective JNK inhibitors with improved pharmacokinetic properties for the prevention of neurodegeneration
分子名称: Mitogen-activated protein kinase 10, N-[4-cyano-3-(1H-1,2,4-triazol-5-yl)thiophen-2-yl]-2-(2-oxo-3,4-dihydroquinolin-1(2H)-yl)acetamide
著者Bowers, S, Truong, A.P, Neitz, R.J, Hom, R.K, Sealy, J.M, Probst, G.D, Quincy, Q, Peterson, B, Chan, W, Galemmo Jr, R.A, Konradi, A.W, Sham, H.L, Pan, H, Lin, M, Yao, N, Artis, D.R, Zhang, H, Chen, L, Dryer, M, Samant, B, Zmolek, W, Wong, K, Lorentzen, C, Goldbach, E, Tonn, G, Quinn, K.P, Sauer, J, Wright, S, Powell, K, Ruslim, L, Ren, Z, Bard, F, Yednock, T.A, Griswold-Prenne, I.
登録日2011-05-03
公開日2013-05-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Design and synthesis of brain penetrant selective JNK inhibitors with improved pharmacokinetic properties for the prevention of neurodegeneration.
Bioorg.Med.Chem.Lett., 21, 2011
3PTG
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BU of 3ptg by Molmil
Design and Synthesis of a Novel, Orally Efficacious Tri-substituted Thiophene Based JNK Inhibitor
分子名称: C-Jun-amino-terminal kinase-interacting protein 1, Mitogen-activated protein kinase 10, N-[4-methyl-3-(1H-1,2,4-triazol-5-yl)thiophen-2-yl]-2-(2-oxo-3,4-dihydroquinolin-1(2H)-yl)acetamide
著者Bowers, S, Truong, A.P, Neitz, J, Neitzel, M, Probst, G.D, Hom, R.K, Konradi, A.W, Sham, H.L, Toth, G, Pan, H, Yao, N, Artis, D.R, Brigham, E.F, Quinn, K.P, Sauer, J, Powell, K, Ruslim, L, Bard, F, Yednock, T.A, Griswold-Prenner, I.
登録日2010-12-02
公開日2011-03-02
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Design and synthesis of a novel, orally active, brain penetrant, tri-substituted thiophene based JNK inhibitor.
Bioorg.Med.Chem.Lett., 21, 2011
4I5M
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BU of 4i5m by Molmil
Selective & Brain-Permeable Polo-like Kinase-2 (Plk-2) Inhibitors that Reduce -Synuclein Phosphorylation in Rat Brain
分子名称: 4-{[(7R)-8-cyclopentyl-7-ethyl-5-methyl-6-oxo-5,6,7,8-tetrahydropteridin-2-yl]amino}-3-methoxy-N-(1-methylpiperidin-4-yl)benzamide, Serine/threonine-protein kinase PLK2
著者Aubele, D.L, Hom, R.K, Adler, M, Galemmo Jr, R.A, Bowers, S, Truong, A.P, Pan, H, Beroza, P, Neitz, R.J, Yao, N, Lin, M, Tonn, G, Zhang, H, Bova, M.P, Ren, Z, Tam, D, Ruslim, L, Baker, J, Diep, L, Fitzgerald, K, Hoffman, J, Motter, R, Fauss, D, Tanaka, P, Dappen, M, Jagodzinski, J, Chan, W, Konradi, A.W, Latimer, L, Zhu, Y.L, Artis, D.R, Sham, H.L, Anderson, J.P, Bergeron, M.
登録日2012-11-28
公開日2013-12-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Selective and brain-permeable polo-like kinase-2 (Plk-2) inhibitors that reduce alpha-synuclein phosphorylation in rat brain.
Chemmedchem, 8, 2013
2Z2S
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BU of 2z2s by Molmil
Crystal Structure of Rhodobacter sphaeroides SigE in complex with the anti-sigma ChrR
分子名称: Anti-Sigma factor ChrR, transcriptional activator ChrR, RpoE, ...
著者Darst, S.A, Campbell, E.A.
登録日2007-05-26
公開日2008-02-05
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A conserved structural module regulates transcriptional responses to diverse stress signals in bacteria.
Mol.Cell, 27, 2007
6U7J
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BU of 6u7j by Molmil
Uncultured Clostridium sp. Beta-glucuronidase
分子名称: Beta-glucuronidase, CALCIUM ION
著者Ervin, S.M, Redinbo, M.R.
登録日2019-09-03
公開日2019-10-30
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Gut microbial beta-glucuronidases reactivate estrogens as components of the estrobolome that reactivate estrogens.
J.Biol.Chem., 294, 2019
6U7I
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BU of 6u7i by Molmil
Faecalibacterium prausnitzii Beta-glucuronidase
分子名称: Beta-glucuronidase
著者Ervin, S.M, Redinbo, M.R.
登録日2019-09-03
公開日2019-10-30
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Gut microbial beta-glucuronidases reactivate estrogens as components of the estrobolome that reactivate estrogens.
J.Biol.Chem., 294, 2019
6USS
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BU of 6uss by Molmil
Catalytic S88C mutant of gut microbial sulfatase from Bacteroides fragilis CAG:558
分子名称: CALCIUM ION, Sulfatase
著者Ervin, S.M, Redinbo, M.R.
登録日2019-10-28
公開日2020-11-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Insights into Endobiotic Reactivation by Human Gut Microbiome-Encoded Sulfatases.
Biochemistry, 59, 2020
6UST
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BU of 6ust by Molmil
Gut microbial sulfatase from Hungatella hathewayi
分子名称: CALCIUM ION, N-acetylgalactosamine 6-sulfate sulfatase
著者Ervin, S.M, Redinbo, M.R.
登録日2019-10-28
公開日2020-11-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural Insights into Endobiotic Reactivation by Human Gut Microbiome-Encoded Sulfatases.
Biochemistry, 59, 2020
2Q1Z
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BU of 2q1z by Molmil
Crystal Structure of Rhodobacter sphaeroides SigE in complex with the anti-sigma ChrR
分子名称: Anti-Sigma factor ChrR, transcriptional activator ChrR, RpoE, ...
著者Campbell, E.A, Darst, S.A.
登録日2007-05-25
公開日2007-09-18
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A conserved structural module regulates transcriptional responses to diverse stress signals in bacteria.
Mol.Cell, 27, 2007
6D7J
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BU of 6d7j by Molmil
The Crystal Structure of Parabacteroides merdae Beta-Glucuronidase (GUS) with Glycerol in Active-Site
分子名称: Beta-Glucuronidase, GLYCEROL, POTASSIUM ION, ...
著者Little, M.S, Redinbo, M.R.
登録日2018-04-24
公開日2019-05-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Active site flexibility revealed in crystal structures of Parabacteroides merdae beta-glucuronidase from the human gut microbiome.
Protein Sci., 27, 2018
4L67
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BU of 4l67 by Molmil
Crystal Structure of Catalytic Domain of PAK4
分子名称: Serine/threonine-protein kinase PAK 4
著者Wang, W, Song, J.
登録日2013-06-12
公開日2013-08-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献NMR binding and crystal structure reveal that intrinsically-unstructured regulatory domain auto-inhibits PAK4 by a mechanism different for that of PAK1
Biochem.Biophys.Res.Commun., 438, 2013
2LW8
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BU of 2lw8 by Molmil
NMR solution structure of Eph receptor
分子名称: Ephrin type-A receptor 4
著者Qin, H, Song, J.
登録日2012-07-24
公開日2013-07-24
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献NMR solution structure of Eph receptor
To be Published
1CA5
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BU of 1ca5 by Molmil
INTERCALATION SITE OF HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SSO7D/SAC7D BOUND TO DNA
分子名称: 5'-D(*GP*TP*GP*AP*TP*CP*AP*C)-3', CHROMOSOMAL PROTEIN SAC7D
著者Su, S, Gao, Y.-G, Robinson, H, Shriver, J.W, Wang, A.H.-J.
登録日1999-02-23
公開日2000-02-23
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of the chromosomal proteins Sso7d/Sac7d bound to DNA containing T-G mismatched base-pairs
J.Mol.Biol., 303, 2000
1CA6
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BU of 1ca6 by Molmil
INTERCALATION SITE OF HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SSO7D/SAC7D BOUND TO DNA
分子名称: 5'-D(*GP*TP*GP*AP*TP*CP*GP*C)-3', CHROMOSOMAL PROTEIN SAC7D
著者Su, S, Gao, Y.-G, Robinson, H, Shriver, J.W, Wang, A.H.-J.
登録日1999-02-23
公開日2000-02-23
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of the chromosomal proteins Sso7d/Sac7d bound to DNA containing T-G mismatched base-pairs
J.Mol.Biol., 303, 2000
3N4L
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BU of 3n4l by Molmil
BACE-1 in complex with ELN380842
分子名称: Beta-secretase 1, N-[(1S,2R)-1-(3,5-difluorobenzyl)-2-hydroxy-3-({1-[3-(1H-pyrazol-1-yl)phenyl]cyclohexyl}amino)propyl]acetamide
著者Yao, N.H.
登録日2010-05-21
公開日2010-11-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Improving the permeability of the hydroxyethylamine BACE-1 inhibitors: structure-activity relationship of P2' substituents.
Bioorg.Med.Chem.Lett., 20, 2010

 

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