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3KXC
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BU of 3kxc by Molmil
Mutant transport protein
分子名称: PALMITIC ACID, Trafficking protein particle complex subunit 3, Trafficking protein particle complex subunit 6B
著者Kummel, D, Heinemann, U.
登録日2009-12-02
公開日2010-04-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Characterization of the self-palmitoylation activity of the transport protein particle component Bet3
Cell.Mol.Life Sci., 67, 2010
2BJN
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BU of 2bjn by Molmil
X-ray Structure of human TPC6
分子名称: GLYCEROL, SULFATE ION, TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 6B
著者Kummel, D, Mueller, J.J, Roske, Y, Misselwitz, R, Bussow, K, Heinemann, U.
登録日2005-02-04
公開日2005-07-20
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The Structure of the Trapp Subunit Tpc6 Suggests a Model for a Trapp Subcomplex.
Embo Rep., 6, 2005
2CFH
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BU of 2cfh by Molmil
Structure of the Bet3-TPC6B core of TRAPP
分子名称: PALMITIC ACID, TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3, TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 6B
著者Kummel, D, Muller, J.J, Roske, Y, Henke, N, Heinemann, U.
登録日2006-02-21
公開日2006-07-12
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of the Bet3-Tpc6B Core of Trapp: Two Tpc6 Paralogs Form Trimeric Complexes with Bet3 and Mum2.
J.Mol.Biol., 361, 2006
5HIU
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BU of 5hiu by Molmil
Structure of the TSC2 N-terminus
分子名称: GTPase activator-like protein
著者Zech, R, Kiontke, S, Kummel, D.
登録日2016-01-12
公開日2016-08-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of the Tuberous Sclerosis Complex 2 (TSC2) N Terminus Provides Insight into Complex Assembly and Tuberous Sclerosis Pathogenesis.
J.Biol.Chem., 291, 2016
8CPN
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BU of 8cpn by Molmil
Crystal structure of the PolB16_OarG intein variant S1A, N183A
分子名称: IODIDE ION, PolB16 intein
著者Kattelmann, S, Pasch, T, Mootz, H.D, Kummel, D.
登録日2023-03-03
公開日2023-05-17
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural and biochemical analysis of a novel atypically split intein reveals a conserved histidine specific to cysteine-less inteins.
Chem Sci, 14, 2023
2W3C
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BU of 2w3c by Molmil
Globular head region of the human general vesicular transport factor p115
分子名称: DI(HYDROXYETHYL)ETHER, GENERAL VESICULAR TRANSPORT FACTOR P115
著者Striegl, H, Roske, Y, Kummel, D, Heinemann, U.
登録日2008-11-11
公開日2009-03-03
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Unusual Armadillo Fold in the Human General Vesicular Transport Factor P115
Plos One, 4, 2009
6SSH
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BU of 6ssh by Molmil
Structure of the TSC2 GAP domain
分子名称: 1,2-ETHANEDIOL, GTPase activator-like protein
著者Hansmann, P, Kiontke, S, Kummel, D.
登録日2019-09-06
公開日2020-05-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structure of the TSC2 GAP Domain: Mechanistic Insight into Catalysis and Pathogenic Mutations.
Structure, 28, 2020
3TW8
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BU of 3tw8 by Molmil
GEF domain of DENND 1B in complex with Rab GTPase Rab35
分子名称: DENN domain-containing protein 1B, Ras-related protein Rab-35
著者Wu, X.D, Kummel, D, Reinisch, K.M.
登録日2011-09-21
公開日2011-11-16
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Insights regarding guanine nucleotide exchange from the structure of a DENN-domain protein complexed with its Rab GTPase substrate.
Proc.Natl.Acad.Sci.USA, 108, 2011
6ZFM
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BU of 6zfm by Molmil
Structure of alpha-Cobratoxin with a peptide inhibitor
分子名称: 3-[2-[2-[2-[2-[2-(2-azanylethoxy)ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]propan-1-ol, Alpha-cobratoxin, PENTAETHYLENE GLYCOL, ...
著者Kiontke, S, Kummel, D.
登録日2020-06-17
公開日2020-12-02
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Peptide Inhibitors of the alpha-Cobratoxin-Nicotinic Acetylcholine Receptor Interaction.
J.Med.Chem., 63, 2020
7FSE
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BU of 7fse by Molmil
Crystal Structure of T. maritima reverse gyrase with a minimal latch
分子名称: CHLORIDE ION, DODECAETHYLENE GLYCOL, Reverse gyrase, ...
著者Rasche, R, Kummel, D, Rudolph, M.G, Klostermeier, D.
登録日2023-01-04
公開日2023-05-10
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Structure of reverse gyrase with a minimal latch that supports ATP-dependent positive supercoiling without specific interactions with the topoisomerase domain.
Acta Crystallogr D Struct Biol, 79, 2023
7FSF
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BU of 7fsf by Molmil
CRYSTAL STRUCTURE OF T. MARITIMA REVERSE GYRASE ACTIVE SITE VARIANT Y851F
分子名称: Reverse gyrase, ZINC ION
著者Rasche, R, Kummel, D, Rudolph, M.G, Klostermeier, D.
登録日2023-01-04
公開日2023-05-10
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献Structure of reverse gyrase with a minimal latch that supports ATP-dependent positive supercoiling without specific interactions with the topoisomerase domain.
Acta Crystallogr D Struct Biol, 79, 2023
1TBX
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BU of 1tbx by Molmil
Crystal structure of SSV1 F-93
分子名称: Hypothetical 11.0 kDa protein
著者Kraft, P, Oeckinghaus, A, Kummel, D, Gauss, G.H, Wiedenheft, B, Young, M, Lawrence, C.M.
登録日2004-05-20
公開日2004-07-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of F-93 from Sulfolobus spindle-shaped virus 1, a winged-helix DNA binding protein.
J.Virol., 78, 2004
8OFB
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BU of 8ofb by Molmil
Crystal Structure of T. maritima reverse gyrase with a minimal latch, hexagonal form
分子名称: CHLORIDE ION, HEXAETHYLENE GLYCOL, Reverse gyrase, ...
著者Klostermeier, D, Rasche, R, Mhaindarkar, V, Kummel, D, Rudolph, M.G.
登録日2023-03-15
公開日2023-04-26
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Structure of reverse gyrase with a minimal latch that supports ATP-dependent positive supercoiling without specific interactions with the topoisomerase domain.
Acta Crystallogr D Struct Biol, 79, 2023
3RL0
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BU of 3rl0 by Molmil
Truncated SNARE complex with complexin (P1)
分子名称: Complexin-1, Synaptosomal-associated protein 25, Syntaxin-1A, ...
著者Kuemmel, D, Reinisch, K.M.
登録日2011-04-19
公開日2011-07-27
最終更新日2011-08-24
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Complexin cross-links prefusion SNAREs into a zigzag array.
Nat.Struct.Mol.Biol., 18, 2011
3RK3
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BU of 3rk3 by Molmil
Truncated SNARE complex with complexin
分子名称: Complexin-1, SNAP25, Syntaxin 1a, ...
著者Kuemmel, D, Reinisch, K.M.
登録日2011-04-17
公開日2011-07-27
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Complexin cross-links prefusion SNAREs into a zigzag array.
Nat.Struct.Mol.Biol., 18, 2011
3RK2
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BU of 3rk2 by Molmil
Truncated SNARE complex
分子名称: CALCIUM ION, Synaptosomal-associated protein 25, Syntaxin-1A, ...
著者Kuemmel, D, Reinisch, K.M.
登録日2011-04-17
公開日2011-07-27
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Complexin cross-links prefusion SNAREs into a zigzag array.
Nat.Struct.Mol.Biol., 18, 2011
7A0N
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BU of 7a0n by Molmil
Structure of TSC1 NTD and linker domain
分子名称: Uncharacterized protein,Uncharacterized protein
著者Fitzian, K, Kuemmel, D.
登録日2020-08-10
公開日2021-05-26
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (4.3 Å)
主引用文献TSC1 binding to lysosomal PIPs is required for TSC complex translocation and mTORC1 regulation.
Mol.Cell, 81, 2021
7A0M
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BU of 7a0m by Molmil
TSC1 N-terminal domain
分子名称: SULFATE ION, TSC1 N-terminal domain
著者Zech, R, Kiontke, S, Kuemmel, D.
登録日2020-08-10
公開日2021-05-26
最終更新日2021-07-14
実験手法X-RAY DIFFRACTION (2.32 Å)
主引用文献TSC1 binding to lysosomal PIPs is required for TSC complex translocation and mTORC1 regulation.
Mol.Cell, 81, 2021
7ZTY
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BU of 7zty by Molmil
Structure of Vps39 N-terminal domain from Chaetomium thermophilum
分子名称: CNH domain-containing protein
著者Kiontke, S, Ungermann, C, Kuemmel, D.
登録日2022-05-11
公開日2022-09-21
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Structure of the HOPS tethering complex, a lysosomal membrane fusion machinery.
Elife, 11, 2022
8C7G
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BU of 8c7g by Molmil
Drosophila melanogaster Rab7 GEF complex Mon1-Ccz1-Bulli
分子名称: Caffeine, calcium, zinc sensitivity 1, ...
著者Schaefer, J, Herrmann, E, Kuemmel, D, Moeller, A.
登録日2023-01-15
公開日2023-05-17
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structure of the metazoan Rab7 GEF complex Mon1-Ccz1-Bulli.
Proc.Natl.Acad.Sci.USA, 120, 2023
8CPO
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BU of 8cpo by Molmil
Crystal structure of the PolB16_OarG intein variant S1A, N183A, C111A, C165A
分子名称: PolB16 Intein Cys-less
著者Kattelmann, S, Pasch, T, Mootz, H.D, Kuemmel, D.
登録日2023-03-03
公開日2023-05-17
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural and biochemical analysis of a novel atypically split intein reveals a conserved histidine specific to cysteine-less inteins.
Chem Sci, 14, 2023
8CCI
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BU of 8cci by Molmil
Crystal structure of Mycobacterium smegmatis thioredoxin reductase
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, MAGNESIUM ION, ...
著者Fuesser, F.T, Koch, O, Kuemmel, D.
登録日2023-01-27
公開日2023-07-26
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Novel starting points for fragment-based drug design against mycobacterial thioredoxin reductase identified using crystallographic fragment screening.
Acta Crystallogr D Struct Biol, 79, 2023
5LDD
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BU of 5ldd by Molmil
Crystal structure of the heterodimeric GEF Mon1-Ccz1 in complex with Ypt7
分子名称: Ccz1, Mon1, Rab small monomeric GTPase-like protein, ...
著者Kiontke, S, Kuemmel, D.
登録日2016-06-24
公開日2017-01-18
最終更新日2018-03-14
実験手法X-RAY DIFFRACTION (2.496 Å)
主引用文献Architecture and mechanism of the late endosomal Rab7-like Ypt7 guanine nucleotide exchange factor complex Mon1-Ccz1.
Nat Commun, 8, 2017
7ZU0
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BU of 7zu0 by Molmil
HOPS tethering complex from yeast
分子名称: E3 ubiquitin-protein ligase PEP5, Vacuolar membrane protein PEP3, Vacuolar morphogenesis protein 6, ...
著者Shvarev, D, Schoppe, J, Koenig, C, Perz, A, Fuellbrunn, N, Kiontke, S, Langemeyer, L, Januliene, D, Schnelle, K, Kuemmel, D, Froehlich, F, Moeller, A, Ungermann, C.
登録日2022-05-11
公開日2022-09-28
最終更新日2022-10-12
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Structure of the HOPS tethering complex, a lysosomal membrane fusion machinery.
Elife, 11, 2022
4UUY
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BU of 4uuy by Molmil
Structural Identification of the Vps18 beta-propeller reveals a critical role in the HOPS complex stability and function.
分子名称: 1,2-ETHANEDIOL, GLYCEROL, SULFATE ION, ...
著者Behrmann, H, Gohlke, U, Heinemann, U.
登録日2014-08-01
公開日2014-10-29
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Structural Identification of the Vps18 Beta-Propeller Reveals a Critical Role in the Hops Complex Stability and Function.
J.Biol.Chem., 289, 2014

 

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