Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2V4A
DownloadVisualize
BU of 2v4a by Molmil
Crystal structure of the SeMet-labeled prolyl-4 hydroxylase (P4H) type I from green algae Chlamydomonas reinhardtii.
分子名称: CHLORIDE ION, DIMETHYL SULFOXIDE, GLYCEROL, ...
著者Koski, M.K, Hieta, R, Bollner, C, Kivirikko, K.I, Myllyharju, J, Wierenga, R.K.
登録日2007-06-28
公開日2007-10-30
最終更新日2019-07-24
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献The Active Site of an Algal Prolyl 4-Hydroxylase Has a Large Structural Plasticity.
J.Biol.Chem., 282, 2007
3GZE
DownloadVisualize
BU of 3gze by Molmil
Algal prolyl 4-hydroxylase complexed with zinc and (Ser-Pro)5 peptide substrate
分子名称: ACETIC ACID, Peptide substrate (Ser-Pro)5, Predicted protein, ...
著者Koski, M.K, Wierenga, R.K.
登録日2009-04-07
公開日2009-06-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献The Crystal Structure of an Algal Prolyl 4-Hydroxylase Complexed with a Proline-rich Peptide Reveals a Novel Buried Tripeptide Binding Motif
J.Biol.Chem., 284, 2009
2JIJ
DownloadVisualize
BU of 2jij by Molmil
Crystal structure of the apo form of Chlamydomonas reinhardtii prolyl- 4 hydroxylase type I
分子名称: CHLORIDE ION, PROLYL-4 HYDROXYLASE
著者Koski, M.K, Hieta, R, Bollner, C, Kivirikko, K.I, Myllyharju, J, Wierenga, R.K.
登録日2007-06-28
公開日2007-10-30
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The Active Site of an Algal Prolyl 4-Hydroxylase Has a Large Structural Plasticity.
J.Biol.Chem., 282, 2007
2JIG
DownloadVisualize
BU of 2jig by Molmil
Crystal structure of Chlamydomonas reinhardtii prolyl-4 hydroxylase type I complexed with zinc and pyridine-2,4-dicarboxylate
分子名称: GLYCEROL, PROLYL-4 HYDROXYLASE, PYRIDINE-2,4-DICARBOXYLIC ACID, ...
著者Koski, M.K, Hieta, R, Bollner, C, Kivirikko, K.I, Myllyharju, J, Wierenga, R.K.
登録日2007-06-28
公開日2007-10-30
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献The Active Site of an Algal Prolyl 4-Hydroxylase Has a Large Structural Plasticity.
J.Biol.Chem., 282, 2007
1PN4
DownloadVisualize
BU of 1pn4 by Molmil
Crystal structure of 2-enoyl-CoA hydratase 2 domain of Candida tropicalis multifunctional enzyme type 2 complexed with (3R)-hydroxydecanoyl-CoA.
分子名称: 1,2-ETHANEDIOL, 3R-HYDROXYDECANOYL-COENZYME A, Peroxisomal hydratase-dehydrogenase-epimerase
著者Koski, M.K, Haapalainen, A.M, Hiltunen, J.K, Glumoff, T.
登録日2003-06-12
公開日2004-04-13
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献A Two-domain Structure of One Subunit Explains Unique Features of Eukaryotic Hydratase 2.
J.Biol.Chem., 279, 2004
1PN2
DownloadVisualize
BU of 1pn2 by Molmil
Crystal structure analysis of the selenomethionine labelled 2-enoyl-CoA hydratase 2 domain of Candida tropicalis multifunctional enzyme type 2
分子名称: 1,2-ETHANEDIOL, Peroxisomal hydratase-dehydrogenase-epimerase
著者Koski, M.K, Haapalainen, A.M, Hiltunen, J.K, Glumoff, T.
登録日2003-06-12
公開日2004-04-13
最終更新日2021-10-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献A Two-domain Structure of One Subunit Explains Unique Features of Eukaryotic Hydratase 2.
J.Biol.Chem., 279, 2004
1S9C
DownloadVisualize
BU of 1s9c by Molmil
Crystal structure analysis of the 2-enoyl-CoA hydratase 2 domain of human peroxisomal multifunctional enzyme type 2
分子名称: Peroxisomal multifunctional enzyme type 2
著者Koski, M.K, Haapalainen, A.M, Hiltunen, J.K, Glumoff, T.
登録日2004-02-04
公開日2005-02-15
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of 2-enoyl-CoA hydratase 2 from human peroxisomal multifunctional enzyme type 2.
J.Mol.Biol., 345, 2005
1TJ7
DownloadVisualize
BU of 1tj7 by Molmil
Structure determination and refinement at 2.44 A resolution of Argininosuccinate lyase from E. coli
分子名称: Argininosuccinate lyase, GLYCEROL, PHOSPHATE ION
著者Bhaumik, P, Koski, M.K, Bergman, U, Wierenga, R.K.
登録日2004-06-03
公開日2004-10-26
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Structure determination and refinement at 2.44 A resolution of argininosuccinate lyase from Escherichia coli.
Acta Crystallogr.,Sect.D, 60, 2004
7ZSC
DownloadVisualize
BU of 7zsc by Molmil
Crystal structure of the heterodimeric human C-P4H-II with truncated alpha subunit (C-P4H-II delta281)
分子名称: Prolyl 4-hydroxylase subunit alpha-2, Protein disulfide-isomerase, SULFATE ION
著者Lebedev, A, Koski, M.K, Wierenga, R.K, Murthy, A.V, Sulu, R.
登録日2022-05-06
公開日2022-11-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.85 Å)
主引用文献Crystal structure of the collagen prolyl 4-hydroxylase (C-P4H) catalytic domain complexed with PDI: Toward a model of the C-P4H alpha 2 beta 2 tetramer.
J.Biol.Chem., 298, 2022
8R5W
DownloadVisualize
BU of 8r5w by Molmil
Crystal structure of the three anaphylatoxin-like modules in fibulin-2
分子名称: Fibulin-2
著者Sohail, A.A, Koski, M.K, Ruddock, L.W.
登録日2023-11-18
公開日2024-07-10
最終更新日2024-07-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Biophysical and structural studies of fibulin-2.
Sci Rep, 14, 2024
6TP5
DownloadVisualize
BU of 6tp5 by Molmil
Crystal structure of human Transmembrane prolyl 4-hydroxylase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CHLORIDE ION, ...
著者Myllykoski, M, Sutinen, A, Koski, M.K, Kallio, J.P, Raasakka, A, Myllyharju, J, Wierenga, R.K, Koivunen, P.
登録日2019-12-12
公開日2020-12-23
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure of transmembrane prolyl 4-hydroxylase reveals unique organization of EF and dioxygenase domains.
J.Biol.Chem., 296, 2020
2YQ8
DownloadVisualize
BU of 2yq8 by Molmil
Crystal structure of the SeMet-labeled N-terminal domain and peptide substrate binding domain of alpha subunit of prolyl-4 hydroxylase type I from human.
分子名称: PROLYL 4-HYDROXYLASE SUBUNIT ALPHA-1
著者Anantharajan, J, Koski, M.K, Wierenga, R.K.
登録日2012-11-06
公開日2013-10-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.987 Å)
主引用文献The Structural Motifs for Substrate Binding and Dimerization of the Alpha Subunit of Collagen Prolyl 4-Hydroxylase
Structure, 21, 2013
3OML
DownloadVisualize
BU of 3oml by Molmil
Structure of full-length peroxisomal multifunctional enzyme type 2 from Drosophila melanogaster
分子名称: Peroxisomal Multifunctional Enzyme Type 2, CG3415
著者Haataja, T.J.K, Koski, M.K, Glumoff, T, Hiltunen, J.K.
登録日2010-08-27
公開日2011-03-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Peroxisomal multifunctional enzyme type 2 from the fruitfly: dehydrogenase and hydratase act as separate entities, as revealed by structure and kinetics.
Biochem.J., 435, 2011
4U1A
DownloadVisualize
BU of 4u1a by Molmil
Crystal structure of human peroxisomal delta3,delta2, enoyl-CoA isomerase helix-10 deletion mutant (ISOB-ECI2)
分子名称: CHLORIDE ION, Enoyl-CoA delta isomerase 2
著者Onwukwe, G.U, Koski, M.K, Wierenga, R.K.
登録日2014-07-15
公開日2014-12-24
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Human Delta (3) , Delta (2) -enoyl-CoA isomerase, type 2: a structural enzymology study on the catalytic role of its ACBP domain and helix-10.
Febs J., 282, 2015
4U19
DownloadVisualize
BU of 4u19 by Molmil
Crystal structure of human peroxisomal delta3,delta2, enoyl-CoA isomerase V349A mutant (ISOA-ECI2)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Enoyl-CoA delta isomerase 2
著者Onwukwe, G.U, Koski, M.K, Wierenga, R.K.
登録日2014-07-15
公開日2014-12-24
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Human Delta (3) , Delta (2) -enoyl-CoA isomerase, type 2: a structural enzymology study on the catalytic role of its ACBP domain and helix-10.
Febs J., 282, 2015
4U18
DownloadVisualize
BU of 4u18 by Molmil
Crystal structure of human peroxisomal delta3,delta2, enoyl-CoA isomerase (ISO-ECI2)
分子名称: CHLORIDE ION, Enoyl-CoA delta isomerase 2, mitochondrial, ...
著者Onwukwe, G.U, Koski, M.K, Wierenga, R.K.
登録日2014-07-15
公開日2014-12-24
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.64 Å)
主引用文献Human Delta (3) , Delta (2) -enoyl-CoA isomerase, type 2: a structural enzymology study on the catalytic role of its ACBP domain and helix-10.
Febs J., 282, 2015
4ZDB
DownloadVisualize
BU of 4zdb by Molmil
Yeast enoyl-CoA isomerase (ScECI2) complexed with acetoacetyl-CoA
分子名称: 3,2-trans-enoyl-CoA isomerase, ACETOACETYL-COENZYME A, GLYCEROL, ...
著者Onwukwe, G.U, Koski, M.K, Wierenga, R.K.
登録日2015-04-17
公開日2015-11-11
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Structures of yeast peroxisomal Delta (3), Delta (2)-enoyl-CoA isomerase complexed with acyl-CoA substrate analogues: the importance of hydrogen-bond networks for the reactivity of the catalytic base and the oxyanion hole.
Acta Crystallogr.,Sect.D, 71, 2015
4ZDF
DownloadVisualize
BU of 4zdf by Molmil
Crystal structure of yeast enoyl-CoA isomerase helix-10 deletion (ScECI2-H10) mutant
分子名称: 3,2-trans-enoyl-CoA isomerase, GLYCEROL
著者Onwukwe, G.U, Koski, M.K, Wierenga, R.K.
登録日2015-04-17
公開日2015-11-11
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Structures of yeast peroxisomal Delta (3), Delta (2)-enoyl-CoA isomerase complexed with acyl-CoA substrate analogues: the importance of hydrogen-bond networks for the reactivity of the catalytic base and the oxyanion hole.
Acta Crystallogr.,Sect.D, 71, 2015
4ZDE
DownloadVisualize
BU of 4zde by Molmil
Crystal structure of yeast D3,D2-enoyl-CoA isomerase F268A mutant
分子名称: 3,2-trans-enoyl-CoA isomerase, GLYCEROL, SULFATE ION
著者Onwukwe, G.U, Koski, M.K, Wierenga, R.K.
登録日2015-04-17
公開日2015-11-11
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structures of yeast peroxisomal Delta (3), Delta (2)-enoyl-CoA isomerase complexed with acyl-CoA substrate analogues: the importance of hydrogen-bond networks for the reactivity of the catalytic base and the oxyanion hole.
Acta Crystallogr.,Sect.D, 71, 2015
4BTB
DownloadVisualize
BU of 4btb by Molmil
CRYSTAL STRUCTURE OF THE PEPTIDE(PRO)9 BOUND COMPLEX OF N-TERMINAL DOMAIN AND PEPTIDE SUBSTRATE BINDING DOMAIN OF PROLYL-4 HYDROXYLASE (RESIDUES 1-238) TYPE I FROM HUMAN
分子名称: POLY PROLINE PEPTIDE, PROLYL 4-HYDROXYLASE SUBUNIT ALPHA-1
著者Anantharajan, J, Koski, M.K, Wierenga, R.K.
登録日2013-06-14
公開日2013-10-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.899 Å)
主引用文献The Structural Motifs for Substrate Binding and Dimerization of the Alpha Subunit of Collagen Prolyl 4-Hydroxylase
Structure, 21, 2013
4BTA
DownloadVisualize
BU of 4bta by Molmil
CRYSTAL STRUCTURE OF THE PEPTIDE(PRO-PRO-GLY)3 BOUND COMPLEX OF N- TERMINAL DOMAIN AND PEPTIDE SUBSTRATE BINDING DOMAIN OF PROLYL-4 HYDROXYLASE (RESIDUES 1-244) TYPE I FROM HUMAN
分子名称: PROLINE RICH PEPTIDE, PROLYL 4-HYDROXYLASE SUBUNIT ALPHA-1
著者Anantharajan, J, Koski, M.K, Pekkala, M, Wierenga, R.K.
登録日2013-06-14
公開日2013-10-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献The Structural Motifs for Substrate Binding and Dimerization of the Alpha Subunit of Collagen Prolyl 4-Hydroxylase
Structure, 21, 2013
4BT9
DownloadVisualize
BU of 4bt9 by Molmil
CRYSTAL STRUCTURE OF THE PEPTIDE(PRO-PRO-GLY)3 BOUND COMPLEX OF N- TERMINAL DOMAIN AND PEPTIDE SUBSTRATE BINDING DOMAIN OF PROLYL-4 HYDROXYLASE (RESIDUES 1-238) TYPE I FROM HUMAN
分子名称: (PRO-PRO-GLY)3 PEPTIDE, PROLYL 4-HYDROXYLASE SUBUNIT ALPHA-1
著者Anantharajan, J, Koski, M.K, Wierenga, R.K.
登録日2013-06-14
公開日2013-10-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The Structural Motifs for Substrate Binding and Dimerization of the Alpha Subunit of Collagen Prolyl 4-Hydroxylase
Structure, 21, 2013
4BT8
DownloadVisualize
BU of 4bt8 by Molmil
CRYSTAL STRUCTURE OF THE APO FORM OF N-TERMINAL DOMAIN AND PEPTIDE SUBSTRATE BINDING DOMAIN OF PROLYL-4 HYDROXYLASE TYPE I FROM HUMAN
分子名称: PROLYL 4-HYDROXYLASE SUBUNIT ALPHA-1
著者Anantharajan, J, Koski, M.K, Wierenga, R.K.
登録日2013-06-14
公開日2013-10-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.198 Å)
主引用文献The Structural Motifs for Substrate Binding and Dimerization of the Alpha Subunit of Collagen Prolyl 4-Hydroxylase
Structure, 21, 2013
4ZDC
DownloadVisualize
BU of 4zdc by Molmil
Yeast enoyl-CoA isomerase complexed with octanoyl-CoA
分子名称: 3,2-trans-enoyl-CoA isomerase, GLYCEROL, OCTANOYL-COENZYME A, ...
著者Onwukwe, G.U, Koski, M.K, Wierenga, R.K.
登録日2015-04-17
公開日2015-11-11
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Structures of yeast peroxisomal Delta (3), Delta (2)-enoyl-CoA isomerase complexed with acyl-CoA substrate analogues: the importance of hydrogen-bond networks for the reactivity of the catalytic base and the oxyanion hole.
Acta Crystallogr.,Sect.D, 71, 2015
4ZDD
DownloadVisualize
BU of 4zdd by Molmil
Structure of yeast D3,D2-enoyl-CoA isomerase bound to sulphate ion
分子名称: 3,2-trans-enoyl-CoA isomerase, SULFATE ION
著者Onwukwe, G.U, Koski, M.K, Wierenga, R.K.
登録日2015-04-17
公開日2015-11-11
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structures of yeast peroxisomal Delta (3), Delta (2)-enoyl-CoA isomerase complexed with acyl-CoA substrate analogues: the importance of hydrogen-bond networks for the reactivity of the catalytic base and the oxyanion hole.
Acta Crystallogr.,Sect.D, 71, 2015

 

12>

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon