1D2M
 
 | | UVRB PROTEIN OF THERMUS THERMOPHILUS HB8; A NUCLEOTIDE EXCISION REPAIR ENZYME | | 分子名称: | EXCINUCLEASE ABC SUBUNIT B, SULFATE ION, octyl beta-D-glucopyranoside | | 著者 | Nakagawa, N, Sugahara, M, Masui, R, Kato, R, Fukuyama, K, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 1999-09-25 | | 公開日 | 2000-03-22 | | 最終更新日 | 2024-02-07 | | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | | 主引用文献 | Crystal structure of Thermus thermophilus HB8 UvrB protein, a key enzyme of nucleotide excision repair.
J.Biochem.(Tokyo), 126, 1999
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3CM0
 | | Crystal structure of adenylate kinase from Thermus thermophilus HB8 | | 分子名称: | Adenylate kinase | | 著者 | Nakagawa, N, Kondo, N, Masui, R, Matsuda, Z, Iwamoto, I, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2008-03-20 | | 公開日 | 2008-09-23 | | 最終更新日 | 2024-08-14 | | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | | 主引用文献 | Crystal structure of adenylate kinase from Thermus thermophilus HB8.
To be Published
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2Z0J
 | | Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8 | | 分子名称: | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, Putative uncharacterized protein TTHA1438 | | 著者 | Nakagawa, N, Kukimoto-Niino, M, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2007-05-07 | | 公開日 | 2007-11-13 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (1.5 Å) | | 主引用文献 | Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8
To be Published
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2YYV
 | | Crystal structure of uncharacterized conserved protein from Thermotoga maritima | | 分子名称: | Probable 2-phosphosulfolactate phosphatase | | 著者 | Nakagawa, N, Nakamura, Y, Bessho, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2007-05-02 | | 公開日 | 2007-11-06 | | 最終更新日 | 2011-07-13 | | 実験手法 | X-RAY DIFFRACTION (1.65 Å) | | 主引用文献 | Crystal structure of uncharacterized conserved protein from Thermotoga maritima
To be Published
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2YZO
 | | Crystal structure of uncharacterized conserved protein from Thermotoga maritima | | 分子名称: | D-MALATE, Probable 2-phosphosulfolactate phosphatase | | 著者 | Nakagawa, N, Nakamura, Y, Bessho, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2007-05-06 | | 公開日 | 2007-11-06 | | 最終更新日 | 2012-02-15 | | 実験手法 | X-RAY DIFFRACTION (1.85 Å) | | 主引用文献 | Crystal structure of uncharacterized conserved protein from Thermotoga maritima
To be Published
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2Z0M
 | | Crystal structure of hypothetical ATP-dependent RNA helicase from Sulfolobus tokodaii | | 分子名称: | 337aa long hypothetical ATP-dependent RNA helicase deaD | | 著者 | Nakagawa, N, Kusano, S, Shirouzu, M, Chen, L, Fu, Z.-Q, Chrzas, J, Wang, B.-C, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2007-05-07 | | 公開日 | 2007-11-13 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | | 主引用文献 | Crystal structure of hypothetical ATP-dependent RNA helicase from Sulfolobus tokodaii
To be Published
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3W90
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3W8N
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7E7F
 | | Human CYP11B1 mutant in complex with metyrapone | | 分子名称: | CHOLIC ACID, Cytochrome P450 11B1, mitochondrial, ... | | 著者 | Mukai, K, Sugimoto, H, Reiko, S, Matsuura, T, Hishiki, T, Kagawa, N. | | 登録日 | 2021-02-26 | | 公開日 | 2022-01-05 | | 最終更新日 | 2023-11-29 | | 実験手法 | X-RAY DIFFRACTION (1.4 Å) | | 主引用文献 | Spatially restricted substrate-binding site of cortisol-synthesizing CYP11B1 limits multiple hydroxylations and hinders aldosterone synthesis.
Curr Res Struct Biol, 3, 2021
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2PCJ
 | | Crystal structure of ABC transporter (aq_297) From Aquifex Aeolicus VF5 | | 分子名称: | Lipoprotein-releasing system ATP-binding protein lolD, SULFITE ION | | 著者 | Jeyakanthan, J, Kanaujia, S.P, Vasuki Ranjani, C, Sekar, K, Nakagawa, N, Ebihara, A, Kuramitsu, S, Shinkai, A, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2007-03-30 | | 公開日 | 2007-10-02 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | | 主引用文献 | Crystal structure of ABC transporter (aq_297) From Aquifex Aeolicus VF5
To be Published
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2PBR
 | | Crystal structure of thymidylate kinase (aq_969) from Aquifex Aeolicus VF5 | | 分子名称: | SULFATE ION, Thymidylate kinase | | 著者 | Jeyakanthan, J, Kanaujia, S.P, Vasuki Ranjani, C, Sekar, K, Nakagawa, N, Ebihara, A, Kuramitsu, S, Shinkai, A, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2007-03-29 | | 公開日 | 2007-10-02 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (1.96 Å) | | 主引用文献 | Crystal structure of thymidylate kinase (aq_969) from Aquifex Aeolicus VF5
To be Published
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1UF9
 | | Crystal structure of TT1252 from Thermus thermophilus | | 分子名称: | ADENOSINE-5'-TRIPHOSPHATE, PHOSPHATE ION, TT1252 protein | | 著者 | Seto, A, Murayama, K, Toyama, M, Ebihara, A, Nakagawa, N, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2003-05-28 | | 公開日 | 2003-11-28 | | 最終更新日 | 2024-10-30 | | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | | 主引用文献 | ATP-induced structural change of dephosphocoenzyme A kinase from Thermus thermophilus HB8
PROTEINS, 58, 2005
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5AVM
 | | Crystal structures of 5-aminoimidazole ribonucleotide (AIR) synthetase, PurM, from Thermus thermophilus | | 分子名称: | Phosphoribosylformylglycinamidine cyclo-ligase, SULFATE ION | | 著者 | Kanagawa, M, Baba, S, Watanabe, Y, Nakagawa, N, Ebihara, A, Sampei, G, Kawai, G, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2015-06-23 | | 公開日 | 2015-11-25 | | 最終更新日 | 2023-11-08 | | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | | 主引用文献 | Crystal structures and ligand binding of PurM proteins from Thermus thermophilus and Geobacillus kaustophilus
J.Biochem., 159, 2016
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8UQT
 | | Crystal structure of the Tree Shrew p53 tetramerization domain | | 分子名称: | Cellular tumor antigen p53, SULFATE ION | | 著者 | Wahba, H.M, Sakaguchi, S, Nakagawa, N, Wada, J, Kamada, R, Sakaguchi, K, Omichinski, J.G. | | 登録日 | 2023-10-24 | | 公開日 | 2023-12-20 | | 実験手法 | X-RAY DIFFRACTION (1.16 Å) | | 主引用文献 | Highly Similar Tetramerization Domains from the p53 Protein of Different Mammalian Species Possess Varying Biophysical, Functional and Structural Properties.
Int J Mol Sci, 24, 2023
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8UQS
 | | Crystal structure of the Opossum p53 tetramerization domain | | 分子名称: | Cellular tumor antigen p53 (Fragment) | | 著者 | Wahba, H.M, Sakaguchi, S, Nakagawa, N, Wada, J, Kamada, R, Sakaguchi, K, Omichinski, J.G. | | 登録日 | 2023-10-24 | | 公開日 | 2023-12-20 | | 実験手法 | X-RAY DIFFRACTION (1.35 Å) | | 主引用文献 | Highly Similar Tetramerization Domains from the p53 Protein of Different Mammalian Species Possess Varying Biophysical, Functional and Structural Properties.
Int J Mol Sci, 24, 2023
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2DQB
 | | Crystal structure of dNTP triphosphohydrolase from Thermus thermophilus HB8, which is homologous to dGTP triphosphohydrolase | | 分子名称: | Deoxyguanosinetriphosphate triphosphohydrolase, putative, MAGNESIUM ION | | 著者 | Kondo, N, Nakagawa, N, Ebihara, A, Chen, L, Liu, Z.-J, Wang, B.-C, Yokoyama, S, Kuramitsu, S, Masui, R, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2006-05-25 | | 公開日 | 2007-01-23 | | 最終更新日 | 2024-10-30 | | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | | 主引用文献 | Structure of dNTP-inducible dNTP triphosphohydrolase: insight into broad specificity for dNTPs and triphosphohydrolase-type hydrolysis
ACTA CRYSTALLOGR.,SECT.D, 63, 2007
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5AWE
 | | Crystal structure of a hypothetical protein, TTHA0829 from Thermus thermophilus HB8, composed of cystathionine-beta-synthase (CBS) and aspartate-kinase chorismate-mutase tyrA (ACT) domains | | 分子名称: | Putative acetoin utilization protein, acetoin dehydrogenase | | 著者 | Nakabayashi, M, Shibata, N, Kanagawa, M, Nakagawa, N, Kuramitsu, S, Higuchi, Y. | | 登録日 | 2015-07-03 | | 公開日 | 2016-05-18 | | 最終更新日 | 2024-10-09 | | 実験手法 | X-RAY DIFFRACTION (2.45 Å) | | 主引用文献 | Crystal structure of a hypothetical protein, TTHA0829 from Thermus thermophilus HB8, composed of cystathionine-beta-synthase (CBS) and aspartate-kinase chorismate-mutase tyrA (ACT) domains.
Extremophiles, 20, 2016
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5H45
 | | Crystal structure of the C-terminal Lon protease-like domain of Thermus thermophilus RadA/Sms | | 分子名称: | DNA repair protein RadA | | 著者 | Inoue, M, Fukui, K, Fujii, Y, Nakagawa, N, Yano, T, Kuramitsu, S, Masui, R. | | 登録日 | 2016-10-30 | | 公開日 | 2017-05-03 | | 最終更新日 | 2024-03-20 | | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | | 主引用文献 | The Lon protease-like domain in the bacterial RecA paralog RadA is required for DNA binding and repair.
J. Biol. Chem., 292, 2017
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2PCL
 | | Crystal structure of ABC transporter with complex (aq_297) from aquifex aeolicus VF5 | | 分子名称: | 1,2-ETHANEDIOL, Lipoprotein-releasing system ATP-binding protein lolD, MAGNESIUM ION, ... | | 著者 | Jeyakanthan, J, Kanaujia, S.P, Rafi, Z.A, Sekar, K, Ebihara, A, Nakagawa, N, Kuramitsu, S, Shinkai, A, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2007-03-30 | | 公開日 | 2007-10-02 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | | 主引用文献 | Crystal structure of ABC transporter with complex (aq_297) from aquifex aeolicus VF5
To be Published
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2PLR
 | | Crystal structure of dTMP kinase (st1543) from Sulfolobus Tokodaii Strain7 | | 分子名称: | 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ... | | 著者 | Kanaujia, S.P, Jeyakanthan, J, Rafi, Z.A, Sekar, K, Nakagawa, N, Ebihara, A, Kuramitsu, S, Shinkai, A, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2007-04-20 | | 公開日 | 2008-04-22 | | 最終更新日 | 2023-11-15 | | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | | 主引用文献 | Crystal structure of dTMP kinase (st1543) from Sulfolobus Tokodaii Strain7
To be Published
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3AUO
 | | DNA polymerase X from Thermus thermophilus HB8 ternary complex with 1-nt gapped DNA and ddGTP | | 分子名称: | 1-nt gapped DNA, 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA polymerase beta family (X family), ... | | 著者 | Nakane, S, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2011-02-11 | | 公開日 | 2012-01-25 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | | 主引用文献 | The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
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2D3Y
 | | Crystal structure of uracil-DNA glycosylase from Thermus Thermophilus HB8 | | 分子名称: | 2'-DEOXYURIDINE-5'-MONOPHOSPHATE, ACETATE ION, IRON/SULFUR CLUSTER, ... | | 著者 | Kosaka, H, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2005-10-04 | | 公開日 | 2006-10-17 | | 最終更新日 | 2024-03-13 | | 実験手法 | X-RAY DIFFRACTION (1.55 Å) | | 主引用文献 | Crystal structure of family 5 uracil-DNA glycosylase bound to DNA.
J.Mol.Biol., 373, 2007
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2D66
 | | Aspartate Aminotransferase Mutant MAB | | 分子名称: | Aspartate aminotransferase, PYRIDOXAL-5'-PHOSPHATE, SULFATE ION | | 著者 | Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S. | | 登録日 | 2005-11-09 | | 公開日 | 2006-11-14 | | 最終更新日 | 2021-11-10 | | 実験手法 | X-RAY DIFFRACTION (2.18 Å) | | 主引用文献 | The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
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2D7Z
 | | Aspartate Aminotransferase Mutant MAB Complexed with Maleic Acid | | 分子名称: | Aspartate aminotransferase, MALEIC ACID, PYRIDOXAL-5'-PHOSPHATE | | 著者 | Tanaka, Y, Nakagawa, N, Tada, H, Yano, T, Masui, R, Kuramitsu, S. | | 登録日 | 2005-11-30 | | 公開日 | 2006-11-14 | | 最終更新日 | 2021-11-10 | | 実験手法 | X-RAY DIFFRACTION (2.65 Å) | | 主引用文献 | The Structures of Aspartate Aminotransferase with Mutations of Non-Active-Site Residues
To be Published
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2DC0
 | | Crystal structure of amidase | | 分子名称: | probable amidase | | 著者 | Ohshima, T, Sakuraba, H, Ebihara, A, Kanagawa, M, Nakagawa, N, Kuroishi, C, Satoh, S, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2005-12-17 | | 公開日 | 2007-01-02 | | 最終更新日 | 2024-10-30 | | 実験手法 | X-RAY DIFFRACTION (2 Å) | | 主引用文献 | Crystal structure of amidase
To be Published
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