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2N4L
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BU of 2n4l by Molmil
Solution Structure of the HIV-1 Intron Splicing Silencer and its Interactions with the UP1 Domain of hnRNP A1
分子名称: RNA (53-MER)
著者Tolbert, B.S, Jain, N, Morgan, C.E, Rife, B.D, Salemi, M.
登録日2015-06-23
公開日2015-12-02
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution Structure of the HIV-1 Intron Splicing Silencer and Its Interactions with the UP1 Domain of Heterogeneous Nuclear Ribonucleoprotein (hnRNP) A1.
J.Biol.Chem., 291, 2016
5OYD
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BU of 5oyd by Molmil
GH5 endo-xyloglucanase from Cellvibrio japonicus
分子名称: CHLORIDE ION, Cellulase, putative, ...
著者Attia, M, Nelson, C.E, Offen, W.A, Jain, N, Gardner, J.G, Davies, G.J, Brumer, H.
登録日2017-09-08
公開日2018-02-07
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献In vitro and in vivo characterization of threeCellvibrio japonicusglycoside hydrolase family 5 members reveals potent xyloglucan backbone-cleaving functions.
Biotechnol Biofuels, 11, 2018
5OYE
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BU of 5oye by Molmil
GH5 endo-xyloglucanase from Cellvibrio japonicus
分子名称: CHLORIDE ION, Cellulase, putative, ...
著者Attia, M, Nelson, C.E, Offen, W.A, Jain, N, Gardner, J.G, Davies, G.J, Brumer, H.
登録日2017-09-08
公開日2018-02-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献In vitro and in vivo characterization of threeCellvibrio japonicusglycoside hydrolase family 5 members reveals potent xyloglucan backbone-cleaving functions.
Biotechnol Biofuels, 11, 2018
5OYC
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BU of 5oyc by Molmil
GH5 endo-xyloglucanase from Cellvibrio japonicus
分子名称: CHLORIDE ION, Cellulase, putative, ...
著者Attia, M, Nelson, C.E, Offen, W.A, Jain, N, Gardner, J.G, Davies, G.J, Brumer, H.
登録日2017-09-08
公開日2018-02-07
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献In vitro and in vivo characterization of threeCellvibrio japonicusglycoside hydrolase family 5 members reveals potent xyloglucan backbone-cleaving functions.
Biotechnol Biofuels, 11, 2018
5NBO
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BU of 5nbo by Molmil
Bacteroides ovatus mixed linkage glucan PUL (MLGUL) GH16
分子名称: 1,2-ETHANEDIOL, Glycosyl hydrolase family 16
著者Hemsworth, G.R, Tamura, K, Dejean, G, Rogers, T.E, Pudlo, N.A, Urs, K, Jain, N, Martens, E.C, Brumer, H, Davies, G.J.
登録日2017-03-02
公開日2017-10-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Molecular Mechanism by which Prominent Human Gut Bacteroidetes Utilize Mixed-Linkage Beta-Glucans, Major Health-Promoting Cereal Polysaccharides.
Cell Rep, 21, 2017
5NBP
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BU of 5nbp by Molmil
Bacteroides ovatus mixed linkage glucan PUL (MLGUL) GH16 in complex with G4G4G3G Product
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Glycosyl hydrolase family 16, ...
著者Hemsworth, G.R, Tamura, K, Dejean, G, Rogers, T.E, Pudlo, N.A, Urs, K, Jain, N, Martens, E.C, Brumer, H, Davies, G.J.
登録日2017-03-02
公開日2017-10-25
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Molecular Mechanism by which Prominent Human Gut Bacteroidetes Utilize Mixed-Linkage Beta-Glucans, Major Health-Promoting Cereal Polysaccharides.
Cell Rep, 21, 2017
6PPF
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BU of 6ppf by Molmil
Bacterial 45SRbgA ribosomal particle class B
分子名称: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
著者Ortega, J, Seffouh, A, Jain, N, Jahagirdar, D, Basu, K, Razi, A, Ni, X, Guarne, A, Britton, R.A.
登録日2019-07-06
公開日2019-09-18
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural consequences of the interaction of RbgA with a 50S ribosomal subunit assembly intermediate.
Nucleic Acids Res., 47, 2019
6PVK
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BU of 6pvk by Molmil
Bacterial 45SRbgA ribosomal particle class A
分子名称: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
著者Ortega, J, Seffouh, A, Jain, N, Jahagirdar, D, Basu, K, Razi, A, Ni, X, Guarne, A, Britton, R.A.
登録日2019-07-20
公開日2019-09-18
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural consequences of the interaction of RbgA with a 50S ribosomal subunit assembly intermediate.
Nucleic Acids Res., 47, 2019
6VHO
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BU of 6vho by Molmil
Glycoside hydrolase family 16 endo-glucanase from Bacteroides ovatus in complex with G4G4G3G-NHCOCH2Br
分子名称: Glycosyl hydrolase family 16, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-3)-N-acetyl-beta-D-glucopyranosylamine
著者Tamura, K, Brumer, H, van Petegem, F.
登録日2020-01-10
公開日2021-01-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.148 Å)
主引用文献Orthogonal Active-Site Labels for Mixed-Linkage endo-beta-Glucanases.
Acs Chem.Biol., 16, 2021
6HA9
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BU of 6ha9 by Molmil
Structure of an endo-Xyloglucanase from Cellvibrio japonicus complexed with XXXG(2F)-beta-DNP
分子名称: Cellulase, putative, cel5D, ...
著者Offen, W.A, Davies, G.J.
登録日2018-08-07
公開日2018-10-03
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Synthesis and application of a highly branched, mechanism-based 2-deoxy-2-fluoro-oligosaccharide inhibitor of endo-xyloglucanases.
Org. Biomol. Chem., 16, 2018
6HAA
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BU of 6haa by Molmil
Structure of a covalent complex of endo-Xyloglucanase from Cellvibrio japonicus after reacting with XXXG(2F)-beta-DNP
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Cellulase, putative, ...
著者Offen, W, Davies, G.J.
登録日2018-08-07
公開日2018-10-03
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Synthesis and application of a highly branched, mechanism-based 2-deoxy-2-fluoro-oligosaccharide inhibitor of endo-xyloglucanases.
Org. Biomol. Chem., 16, 2018
7KR6
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BU of 7kr6 by Molmil
Glycoside hydrolase family 16 endo-glucanase from Bacteroides ovatus in complex with G4G3G-2F-DNP
分子名称: Glycoside hydrolase family 16 protein, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-3)-2-deoxy-2-fluoro-alpha-D-glucopyranose
著者Tamura, K, Brumer, H, van Petegem, F.
登録日2020-11-18
公開日2021-05-19
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Orthogonal Active-Site Labels for Mixed-Linkage endo-beta-Glucanases.
Acs Chem.Biol., 16, 2021
6NQB
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BU of 6nqb by Molmil
Role of Era in Assembly and Homeostasis of the Ribosomal Small Subunit
分子名称: 16S RIBOSOMAL RNA, 30S RIBOSOMAL PROTEIN bS16, 30S ribosomal protein S10, ...
著者Ortega, J.
登録日2019-01-20
公開日2019-06-26
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Role of Era in assembly and homeostasis of the ribosomal small subunit.
Nucleic Acids Res., 47, 2019
7DK1
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BU of 7dk1 by Molmil
Crystal structure of Zinc bound SARS-CoV-2 main protease
分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3C-like proteinase, CHLORIDE ION, ...
著者Sonkar, K.S, Panchariya, L, Kuila, S, Khan, W.A, Arockiasamy, A.
登録日2020-11-22
公開日2021-06-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.902 Å)
主引用文献Zinc 2+ ion inhibits SARS-CoV-2 main protease and viral replication in vitro.
Chem.Commun.(Camb.), 57, 2021
2N59
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BU of 2n59 by Molmil
Solution Structure of R. palustris CsgH
分子名称: Putative uncharacterized protein CsgH
著者Hawthorne, W.J, Taylor, J.D, Escalera-Maurer, A, Lambert, S, Koch, M, Scull, N, Sefer, L, Xu, Y, Matthews, S.J.
登録日2015-07-13
公開日2016-05-11
実験手法SOLUTION NMR
主引用文献Electrostatically-guided inhibition of Curli amyloid nucleation by the CsgC-like family of chaperones.
Sci Rep, 6, 2016
5KCI
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BU of 5kci by Molmil
Crystal Structure of HTC1
分子名称: GLYCEROL, SULFATE ION, Uncharacterized protein YPL067C, ...
著者Martin, R.M, Horowitz, S, Koepnick, B, Cooper, S, Flatten, J, Rogawski, D.S, Koropatkin, N.M, Beinlich, F.R.M, Players, F, Students, U.M, Popovic, Z, Baker, D, Khatib, F, Bardwell, J.C.A.
登録日2016-06-06
公開日2016-09-21
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.833 Å)
主引用文献Determining crystal structures through crowdsourcing and coursework.
Nat Commun, 7, 2016
7V06
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BU of 7v06 by Molmil
Encoded Conformational Dynamics of the HIV Splice Site A3 Regulatory Locus: Implications for differential binding of hnRNP Splicing Auxiliary Factors
分子名称: RNA (43-MER)
著者Tolbert, B.S, Chiu, L.Y, Sugarman, A.L.
登録日2022-05-09
公開日2022-06-29
最終更新日2024-05-15
実験手法SOLUTION NMR, SOLUTION SCATTERING
主引用文献Encoded Conformational Dynamics of the HIV Splice Site A3 Regulatory Locus: Implications for Differential Binding of hnRNP Splicing Auxiliary Factors.
J.Mol.Biol., 2022
8EFK
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BU of 8efk by Molmil
Structure of Lates calcarifer DNA polymerase theta polymerase domain with hairpin DNA
分子名称: 2',3'-dideoxyadenosine triphosphate, DNA (5'-D(P*TP*TP*TP*TP*GP*GP*CP*TP*TP*TP*TP*GP*CP*CP*(2DA))-3'), Lates calcarifer DNA polymerase theta, ...
著者Li, C, Zhu, H, Sun, J, Gao, Y.
登録日2022-09-08
公開日2022-12-14
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural basis of DNA polymerase theta mediated DNA end joining.
Nucleic Acids Res., 51, 2023
8EF9
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BU of 8ef9 by Molmil
Structure of Lates calcarifer DNA polymerase theta polymerase domain with long duplex DNA, complex Ia
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*AP*GP*CP*AP*TP*CP*CP*GP*TP*AP*GP*(2DA))-3'), DNA (5'-D(*AP*GP*CP*TP*CP*TP*AP*CP*GP*GP*AP*TP*GP*C)-3'), ...
著者Li, C, Zhu, H, Sun, J, Gao, Y.
登録日2022-09-08
公開日2022-12-14
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Structural basis of DNA polymerase theta mediated DNA end joining.
Nucleic Acids Res., 51, 2023
8EFC
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BU of 8efc by Molmil
Structure of Lates calcarifer DNA polymerase theta polymerase domain with long duplex DNA, complex Ia
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*AP*CP*TP*GP*TP*GP*AP*GP*GP*CP*AP*TP*CP*CP*GP*TP*AP*GP*(2DA))-3'), DNA (5'-D(*AP*GP*CP*TP*CP*TP*AP*CP*GP*GP*AP*TP*GP*CP*CP*TP*CP*AP*CP*AP*G)-3'), ...
著者Li, C, Zhu, H, Sun, J, Gao, Y.
登録日2022-09-08
公開日2022-12-14
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural basis of DNA polymerase theta mediated DNA end joining.
Nucleic Acids Res., 51, 2023
7S9U
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BU of 7s9u by Molmil
44SR3C ribosomal particle
分子名称: 50S ribosomal protein L13, 50S ribosomal protein L14, 50S ribosomal protein L15, ...
著者Ortega, J, Seffouh, A.
登録日2021-09-21
公開日2022-03-02
最終更新日2022-11-16
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献RbgA ensures the correct timing in the maturation of the 50S subunits functional sites.
Nucleic Acids Res., 50, 2022
7SAE
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BU of 7sae by Molmil
44SR70P Class1 ribosomal particle
分子名称: 50S ribosomal protein L13, 50S ribosomal protein L14, 50S ribosomal protein L15, ...
著者Ortega, J, Seffouh, A.
登録日2021-09-22
公開日2022-03-02
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献RbgA ensures the correct timing in the maturation of the 50S subunits functional sites.
Nucleic Acids Res., 50, 2022
6PAL
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BU of 6pal by Molmil
Bacteroides uniformis endo-laminarinase BuGH158 from the beta(1,3)-glucan utilization locus
分子名称: ACETATE ION, SULFATE ION, Uncharacterized protein
著者Tamura, K, Brumer, H, van Petegem, F.
登録日2019-06-11
公開日2020-04-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.818 Å)
主引用文献Synergy between Cell Surface Glycosidases and Glycan-Binding Proteins Dictates the Utilization of Specific Beta(1,3)-Glucans by Human GutBacteroides.
Mbio, 11, 2020
6PPK
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BU of 6ppk by Molmil
RbgA+45SRbgA complex
分子名称: 23S rRNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
著者Ortega, J.
登録日2019-07-07
公開日2019-09-18
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Structural consequences of the interaction of RbgA with a 50S ribosomal subunit assembly intermediate.
Nucleic Acids Res., 47, 2019

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