4ZU9
| Crystal structure of bacterial selenocysteine-specific elongation factor EF-Sec | 分子名称: | CYSTEINE, Elongation factor SelB, MAGNESIUM ION, ... | 著者 | Itoh, Y, Sekine, S, Yokoyama, S. | 登録日 | 2015-05-15 | 公開日 | 2015-09-23 | 最終更新日 | 2020-02-19 | 実験手法 | X-RAY DIFFRACTION (3.191 Å) | 主引用文献 | Crystal structure of the full-length bacterial selenocysteine-specific elongation factor SelB Nucleic Acids Res., 43, 2015
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7P2E
| Human mitochondrial ribosome small subunit in complex with IF3, GMPPMP and streptomycin | 分子名称: | 12S mitochondrial rRNA, 28S ribosomal protein S10, mitochondrial, ... | 著者 | Itoh, Y, Khawaja, A, Singh, V, Rorbach, J, Amunts, A. | 登録日 | 2021-07-05 | 公開日 | 2022-07-27 | 最終更新日 | 2024-04-24 | 実験手法 | ELECTRON MICROSCOPY (2.4 Å) | 主引用文献 | Structure of the mitoribosomal small subunit with streptomycin reveals Fe-S clusters and physiological molecules. Elife, 11, 2022
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6ZM6
| Human mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNA | 分子名称: | 12S mitochondrial rRNA, 16S mitochondrial rRNA, 28S ribosomal protein S10, ... | 著者 | Itoh, Y, Andrell, J, Amunts, A. | 登録日 | 2020-07-01 | 公開日 | 2021-01-13 | 最終更新日 | 2023-11-15 | 実験手法 | ELECTRON MICROSCOPY (2.59 Å) | 主引用文献 | Mechanism of membrane-tethered mitochondrial protein synthesis. Science, 371, 2021
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6ZM5
| Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptide | 分子名称: | 12S mitochondrial rRNA, 16S mitochondrial rRNA, 28S ribosomal protein S10, ... | 著者 | Itoh, Y, Andrell, J, Amunts, A. | 登録日 | 2020-07-01 | 公開日 | 2021-01-13 | 最終更新日 | 2023-11-15 | 実験手法 | ELECTRON MICROSCOPY (2.89 Å) | 主引用文献 | Mechanism of membrane-tethered mitochondrial protein synthesis. Science, 371, 2021
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2YYE
| Crystal structure of selenophosphate synthetase from Aquifex aeolicus complexed with AMPCPP | 分子名称: | COBALT (II) ION, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, PHOSPHATE ION, ... | 著者 | Itoh, Y, Sekine, S, Matsumoto, E, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2007-04-29 | 公開日 | 2008-04-29 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Structure of selenophosphate synthetase essential for selenium incorporation into proteins and RNAs J.Mol.Biol., 385, 2009
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7PO0
| Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and IF3 | 分子名称: | 12S mitochondrial rRNA, 28S ribosomal protein S10, mitochondrial, ... | 著者 | Itoh, Y, Khawaja, A, Rorbach, J, Amunts, A. | 登録日 | 2021-09-08 | 公開日 | 2022-06-15 | 最終更新日 | 2024-04-24 | 実験手法 | ELECTRON MICROSCOPY (2.9 Å) | 主引用文献 | Mechanism of mitoribosomal small subunit biogenesis and preinitiation. Nature, 606, 2022
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7PO4
| Assembly intermediate of human mitochondrial ribosome large subunit (largely unfolded rRNA with MALSU1, L0R8F8 and ACP) | 分子名称: | 16SrRNA, 39S ribosomal protein L10, mitochondrial, ... | 著者 | Itoh, Y, Khawaja, A, Rorbach, J, Amunts, A. | 登録日 | 2021-09-08 | 公開日 | 2022-06-15 | 最終更新日 | 2023-11-15 | 実験手法 | ELECTRON MICROSCOPY (2.56 Å) | 主引用文献 | Mechanism of mitoribosomal small subunit biogenesis and preinitiation. Nature, 606, 2022
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7PNT
| Assembly intermediate of mouse mitochondrial ribosome small subunit without mS37 in complex with RbfA and Tfb1m | 分子名称: | 12S mitochondrial rRNA, 28S ribosomal protein S10, mitochondrial, ... | 著者 | Itoh, Y, Khawaja, A, Laptev, I, Sergiev, P, Rorbach, J, Amunts, A. | 登録日 | 2021-09-08 | 公開日 | 2022-06-15 | 最終更新日 | 2024-01-17 | 実験手法 | ELECTRON MICROSCOPY (3.19 Å) | 主引用文献 | Mechanism of mitoribosomal small subunit biogenesis and preinitiation. Nature, 606, 2022
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7PNY
| Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation b | 分子名称: | 12S mitochondrial rRNA, 12S rRNA N4-methylcytidine (m4C) methyltransferase, 28S ribosomal protein S10, ... | 著者 | Itoh, Y, Khawaja, A, Rorbach, J, Amunts, A. | 登録日 | 2021-09-08 | 公開日 | 2022-06-15 | 最終更新日 | 2024-04-24 | 実験手法 | ELECTRON MICROSCOPY (3.06 Å) | 主引用文献 | Mechanism of mitoribosomal small subunit biogenesis and preinitiation. Nature, 606, 2022
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7PNW
| Mouse mitochondrial ribosome small subunit lacking m5U modification | 分子名称: | 12S mitochondrial rRNA, 28S ribosomal protein S10, mitochondrial, ... | 著者 | Itoh, Y, Khawaja, A, Laptev, I, Sergiev, P, Rorbach, J, Amunts, A. | 登録日 | 2021-09-08 | 公開日 | 2022-06-15 | 最終更新日 | 2024-04-24 | 実験手法 | ELECTRON MICROSCOPY (3.09 Å) | 主引用文献 | Mechanism of mitoribosomal small subunit biogenesis and preinitiation. Nature, 606, 2022
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7PO3
| Human mitochondrial ribosome small subunit | 分子名称: | 12S mitochondrial rRNA, 28S ribosomal protein S10, mitochondrial, ... | 著者 | Itoh, Y, Khawaja, A, Rorbach, J, Amunts, A. | 登録日 | 2021-09-08 | 公開日 | 2022-06-15 | 最終更新日 | 2024-04-24 | 実験手法 | ELECTRON MICROSCOPY (2.92 Å) | 主引用文献 | Mechanism of mitoribosomal small subunit biogenesis and preinitiation. Nature, 606, 2022
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7PNU
| Assembly intermediate of mouse mitochondrial ribosome small subunit without mS37 in complex with RbfA inward conformation | 分子名称: | 12S mitochondrial rRNA, 28S ribosomal protein S10, mitochondrial, ... | 著者 | Itoh, Y, Khawaja, A, Laptev, I, Sergiev, P, Rorbach, J, Amunts, A. | 登録日 | 2021-09-08 | 公開日 | 2022-06-15 | 最終更新日 | 2024-01-17 | 実験手法 | ELECTRON MICROSCOPY (3.06 Å) | 主引用文献 | Mechanism of mitoribosomal small subunit biogenesis and preinitiation. Nature, 606, 2022
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7PO1
| Initiation complex of human mitochondrial ribosome small subunit with IF3 | 分子名称: | 12S mitochondrial rRNA, 28S ribosomal protein S10, mitochondrial, ... | 著者 | Itoh, Y, Khawaja, A, Rorbach, J, Amunts, A. | 登録日 | 2021-09-08 | 公開日 | 2022-06-15 | 最終更新日 | 2024-04-24 | 実験手法 | ELECTRON MICROSCOPY (2.92 Å) | 主引用文献 | Mechanism of mitoribosomal small subunit biogenesis and preinitiation. Nature, 606, 2022
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7PNZ
| Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation c | 分子名称: | 12S mitochondrial rRNA, 12S rRNA N4-methylcytidine (m4C) methyltransferase, 28S ribosomal protein S10, ... | 著者 | Itoh, Y, Khawaja, A, Rorbach, J, Amunts, A. | 登録日 | 2021-09-08 | 公開日 | 2022-06-15 | 最終更新日 | 2024-04-24 | 実験手法 | ELECTRON MICROSCOPY (3.09 Å) | 主引用文献 | Mechanism of mitoribosomal small subunit biogenesis and preinitiation. Nature, 606, 2022
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7PO2
| Initiation complex of human mitochondrial ribosome small subunit with IF2, fMet-tRNAMet and mRNA | 分子名称: | 12S mitochondrial rRNA, 28S ribosomal protein S10, mitochondrial, ... | 著者 | Itoh, Y, Khawaja, A, Rorbach, J, Amunts, A. | 登録日 | 2021-09-08 | 公開日 | 2022-06-15 | 最終更新日 | 2024-04-24 | 実験手法 | ELECTRON MICROSCOPY (3.09 Å) | 主引用文献 | Mechanism of mitoribosomal small subunit biogenesis and preinitiation. Nature, 606, 2022
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7PNV
| Assembly intermediate of mouse mitochondrial ribosome small subunit without mS37 in complex with RbfA and Mettl15 | 分子名称: | 12S mitochondrial rRNA, 12S rRNA N4-methylcytidine methyltransferase, 28S ribosomal protein S10, ... | 著者 | Itoh, Y, Khawaja, A, Laptev, I, Sergiev, P, Rorbach, J, Amunts, A. | 登録日 | 2021-09-08 | 公開日 | 2022-06-15 | 最終更新日 | 2024-04-24 | 実験手法 | ELECTRON MICROSCOPY (3.06 Å) | 主引用文献 | Mechanism of mitoribosomal small subunit biogenesis and preinitiation. Nature, 606, 2022
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7PNX
| Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation a | 分子名称: | 12S mitochondrial rRNA, 12S rRNA N4-methylcytidine (m4C) methyltransferase, 28S ribosomal protein S10, ... | 著者 | Itoh, Y, Khawaja, A, Rorbach, J, Amunts, A. | 登録日 | 2021-09-08 | 公開日 | 2022-06-15 | 最終更新日 | 2024-04-24 | 実験手法 | ELECTRON MICROSCOPY (2.76 Å) | 主引用文献 | Mechanism of mitoribosomal small subunit biogenesis and preinitiation. Nature, 606, 2022
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2DQ3
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2DQ0
| Crystal structure of seryl-tRNA synthetase from Pyrococcus horikoshii complexed with a seryl-adenylate analog | 分子名称: | 5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE, SULFATE ION, Seryl-tRNA synthetase | 著者 | Itoh, Y, Sekine, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2006-05-18 | 公開日 | 2007-06-05 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Crystallographic and mutational studies of seryl-tRNA synthetase from the archaeon Pyrococcus horikoshii. Rna Biol., 5, 2008
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3A3A
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3W1H
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3W1J
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3W1I
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3W1K
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3W3S
| Crystal structure of A. aeolicus tRNASec in complex with M. kandleri SerRS | 分子名称: | 5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE, PLATINUM (II) ION, SULFATE ION, ... | 著者 | Itoh, Y, Sekine, S, Yokoyama, S. | 登録日 | 2012-12-27 | 公開日 | 2013-02-13 | 最終更新日 | 2013-08-07 | 実験手法 | X-RAY DIFFRACTION (3.095 Å) | 主引用文献 | Tertiary structure of bacterial selenocysteine tRNA Nucleic Acids Res., 41, 2013
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