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2DH7
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BU of 2dh7 by Molmil
Solution structure of the second RNA binding domain in Nucleolysin TIAR
分子名称: Nucleolysin TIAR
著者Imai, T, Tsuda, K, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-03-23
公開日2006-09-23
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the second RNA binding domain in Nucleolysin TIAR
To be Published
2DHA
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BU of 2dha by Molmil
Solution structure of the second RNA recognition motif in Hypothetical protein FLJ201171
分子名称: FLJ20171 protein
著者Imai, T, Tsuda, K, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-03-23
公開日2006-09-23
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the second RNA recognition motif in Hypothetical protein FLJ201171
To be Published
2DHG
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BU of 2dhg by Molmil
Solution structure of the C-terminal RNA recognition motif in tRNA selenocysteine associated protein
分子名称: tRNA selenocysteine associated protein (SECP43)
著者Imai, T, Tsuda, K, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-03-23
公開日2006-09-23
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the C-terminal RNA recognition motif in tRNA selenocysteine associated protein
To be Published
2RS2
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BU of 2rs2 by Molmil
1H, 13C, and 15N Chemical Shift Assignments for Musashi1 RBD1:r(GUAGU) complex
分子名称: RNA (5'-R(*GP*UP*AP*GP*U)-3'), RNA-binding protein Musashi homolog 1
著者Ohyama, T, Nagata, T, Tsuda, K, Imai, T, Okano, H, Yamazaki, T, Katahira, M.
登録日2011-06-27
公開日2011-12-28
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure of Musashi1 in a complex with target RNA: the role of aromatic stacking interactions
Nucleic Acids Res., 2011
3AB5
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BU of 3ab5 by Molmil
Crystal structure of the 2Fe 2S Ferredoxin from Cyanidioschyzon merolae
分子名称: FE2/S2 (INORGANIC) CLUSTER, Ferredoxin
著者Morimoto, Y, Imai, T, Ozawa, Y.
登録日2009-12-01
公開日2010-11-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Crystal structure of the 2Fe 2S Ferredoxin from Cyanidioschyzon merolae at 1.18A resolution.
To be Published
2MST
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BU of 2mst by Molmil
MUSASHI1 RBD2, NMR
分子名称: PROTEIN (MUSASHI1)
著者Nagata, T, Kanno, R, Kurihara, Y, Uesugi, S, Imai, T, Sakakibara, S, Okano, H, Katahira, M.
登録日1999-05-19
公開日2000-05-19
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Structure, backbone dynamics and interactions with RNA of the C-terminal RNA-binding domain of a mouse neural RNA-binding protein, Musashi1.
J.Mol.Biol., 287, 1999
2MSS
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BU of 2mss by Molmil
MUSASHI1 RBD2, NMR
分子名称: PROTEIN (MUSASHI1)
著者Nagata, T, Kanno, R, Kurihara, Y, Uesugi, S, Imai, T, Sakakibara, S, Okano, H, Katahira, M.
登録日1999-05-19
公開日2000-05-19
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Structure, backbone dynamics and interactions with RNA of the C-terminal RNA-binding domain of a mouse neural RNA-binding protein, Musashi1.
J.Mol.Biol., 287, 1999
5YQ0
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BU of 5yq0 by Molmil
Crystal structure of secreted protein CofJ from ETEC.
分子名称: CALCIUM ION, CofJ
著者Oki, H, Kawahara, K, Maruno, T, Imai, T, Muroga, Y, Fukakusa, S, Iwashita, T, Kobayashi, Y, Matsuda, S, Kodama, T, Iida, T, Yoshida, T, Ohkubo, T, Nakamura, S.
登録日2017-11-04
公開日2018-06-27
最終更新日2018-07-25
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Interplay of a secreted protein with type IVb pilus for efficient enterotoxigenicEscherichia colicolonization
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5YPZ
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BU of 5ypz by Molmil
Crystal structure of minor pilin CofB from CFA/III complexed with N-terminal peptide fragment of CofJ
分子名称: CofB, CofJ
著者Oki, H, Kawahara, K, Maruno, T, Imai, T, Muroga, Y, Fukakusa, S, Iwashita, T, Kobayashi, Y, Matsuda, S, Kodama, T, Iida, T, Yoshida, T, Ohkubo, T, Nakamura, S.
登録日2017-11-04
公開日2018-06-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.521 Å)
主引用文献Interplay of a secreted protein with type IVb pilus for efficient enterotoxigenicEscherichia colicolonization.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5X3Z
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BU of 5x3z by Molmil
Solution structure of musashi1 RBD2 in complex with RNA
分子名称: RNA (5'-R(*GP*UP*AP*GP*U)-3'), RNA-binding protein Musashi homolog 1
著者Iwaoka, R, Nagata, T, Tsuda, K, Imai, T, Okano, H, Kobayashi, N, Katahira, M.
登録日2017-02-09
公開日2017-12-13
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural Insight into the Recognition of r(UAG) by Musashi-1 RBD2, and Construction of a Model of Musashi-1 RBD1-2 Bound to the Minimum Target RNA
Molecules, 22, 2017
5X3Y
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BU of 5x3y by Molmil
Refined solution structure of musashi1 RBD2
分子名称: RNA-binding protein Musashi homolog 1
著者Iwaoka, R, Nagata, T, Tsuda, K, Imai, T, Okano, H, Kobayashi, N, Katahira, M.
登録日2017-02-09
公開日2017-12-13
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural Insight into the Recognition of r(UAG) by Musashi-1 RBD2, and Construction of a Model of Musashi-1 RBD1-2 Bound to the Minimum Target RNA
Molecules, 22, 2017
3WCQ
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BU of 3wcq by Molmil
Crystal structure analysis of Cyanidioschyzon melorae ferredoxin D58N mutant
分子名称: FE2/S2 (INORGANIC) CLUSTER, Ferredoxin
著者Ueno, Y, Matsumoto, T, Yamano, A, Imai, T, Morimoto, Y.
登録日2013-05-31
公開日2013-08-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (0.97 Å)
主引用文献Increasing the electron-transfer ability of Cyanidioschyzon merolae ferredoxin by a one-point mutation - A high resolution and Fe-SAD phasing crystal structure analysis of the Asp58Asn mutant
Biochem.Biophys.Res.Commun., 436, 2013
8X6R
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BU of 8x6r by Molmil
KRasG12C in complex with inhibitor
分子名称: 1-[7-[6-ethenyl-8-ethoxy-7-(5-methyl-1~{H}-indazol-4-yl)-2-(1-methylpiperidin-4-yl)oxy-quinazolin-4-yl]-2,7-diazaspiro[3.5]nonan-2-yl]propan-1-one, GUANOSINE-5'-DIPHOSPHATE, Isoform 2B of GTPase KRas, ...
著者Amano, Y, Tateishi, Y.
登録日2023-11-21
公開日2024-01-17
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Discovery of ASP6918, a KRAS G12C inhibitor: Synthesis and structure-activity relationships of 1-{2,7-diazaspiro[3.5]non-2-yl}prop-2-en-1-one derivatives as covalent inhibitors with good potency and oral activity for the treatment of solid tumors.
Bioorg.Med.Chem., 98, 2023
7YCE
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BU of 7yce by Molmil
KRas G12C in complex with Compound 7b
分子名称: 1-[7-[6-chloranyl-2-(1-ethylpiperidin-4-yl)oxy-8-fluoranyl-7-(5-methyl-1~{H}-indazol-4-yl)quinazolin-4-yl]-2,7-diazaspiro[3.5]nonan-2-yl]propan-1-one, GUANOSINE-5'-DIPHOSPHATE, Isoform 2B of GTPase KRas, ...
著者Amano, Y.
登録日2022-07-01
公開日2022-08-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Discovery and biological evaluation of 1-{2,7-diazaspiro[3.5]nonan-2-yl}prop-2-en-1-one derivatives as covalent inhibitors of KRAS G12C with favorable metabolic stability and anti-tumor activity.
Bioorg.Med.Chem., 71, 2022
7YCC
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KRas G12C in complex with Compound 5c
分子名称: 1-[7-[6-chloranyl-8-fluoranyl-7-(5-methyl-1~{H}-indazol-4-yl)-2-[(1-methylpiperidin-4-yl)amino]quinazolin-4-yl]-2,7-diazaspiro[3.5]nonan-2-yl]propan-1-one, GUANOSINE-5'-DIPHOSPHATE, Isoform 2B of GTPase KRas, ...
著者Amano, Y.
登録日2022-07-01
公開日2022-08-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Discovery and biological evaluation of 1-{2,7-diazaspiro[3.5]nonan-2-yl}prop-2-en-1-one derivatives as covalent inhibitors of KRAS G12C with favorable metabolic stability and anti-tumor activity.
Bioorg.Med.Chem., 71, 2022
1UAW
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BU of 1uaw by Molmil
Solution structure of the N-terminal RNA-binding domain of mouse Musashi1
分子名称: mouse-musashi-1
著者Miyanoiri, Y, Kobayashi, H, Watanabe, M, Ikeda, T, Nagata, T, Okano, H, Uesugi, S, Katahira, M.
登録日2003-03-24
公開日2004-03-24
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Origin of higher affinity to RNA of the N-terminal RNA-binding domain than that of the C-terminal one of a mouse neural protein, musashi1, as revealed by comparison of their structures, modes of interaction, surface electrostatic potentials, and backbone dynamics
J.Biol.Chem., 278, 2003
5AX6
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BU of 5ax6 by Molmil
The crystal structure of CofB, the minor pilin subunit of CFA/III from human enterotoxigenic Escherichia coli.
分子名称: ACETATE ION, CofB
著者Kawahara, K, Oki, K, Fukaksua, F, Maruno, T, Kobayashi, Y, Daisuke, M, Taniguchi, T, Honda, T, Iida, T, Nakamura, S, Ohkubo, T.
登録日2015-07-16
公開日2016-03-09
最終更新日2020-02-26
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Homo-trimeric Structure of the Type IVb Minor Pilin CofB Suggests Mechanism of CFA/III Pilus Assembly in Human Enterotoxigenic Escherichia coli
J.Mol.Biol., 428, 2016
2FDT
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BU of 2fdt by Molmil
Solution structure of a conserved RNA hairpin of eel LINE UnaL2
分子名称: 36-mer
著者Nomura, Y, Baba, S, Nakazato, S, Sakamoto, T, Kajikawa, M, Okada, N, Kawai, G.
登録日2005-12-14
公開日2006-12-05
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure and functional importance of a conserved RNA hairpin of eel LINE UnaL2
Nucleic Acids Res., 34, 2006
3WZY
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BU of 3wzy by Molmil
S266A mutant 3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 580MPa - complex with IPM and Mg
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, MAGNESIUM ION
著者Nagae, T, Watanabe, N.
登録日2014-10-08
公開日2015-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Pressure Adaptation of 3-Isopropylmalate Dehydrogenase from the Extremely Piezophilic Bacterium Shewanella benthica is Attributed to just One Amino Acid Substitution
To be Published
3WZW
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BU of 3wzw by Molmil
3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 580MPa - complex with IPM and Mg
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, MAGNESIUM ION
著者Nagae, T, Watanabe, N.
登録日2014-10-08
公開日2015-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Pressure Adaptation of 3-Isopropylmalate Dehydrogenase from the Extremely Piezophilic Bacterium Shewanella benthica is Attributed to just One Amino Acid Substitution
To be Published
3WZV
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BU of 3wzv by Molmil
3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 0.1MPa - complex with IPM and Mg
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, MAGNESIUM ION
著者Nagae, T, Watanabe, N.
登録日2014-10-07
公開日2015-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Pressure Adaptation of 3-Isopropylmalate Dehydrogenase from the Extremely Piezophilic Bacterium Shewanella benthica is Attributed to just One Amino Acid Substitution
To be Published
3WZX
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BU of 3wzx by Molmil
S266A mutant 3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 0.1MPa - complex with IPM and Mg
分子名称: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, MAGNESIUM ION
著者Nagae, T, Watanabe, N.
登録日2014-10-08
公開日2015-10-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Pressure Adaptation of 3-Isopropylmalate Dehydrogenase from the Extremely Piezophilic Bacterium Shewanella benthica is Attributed to just One Amino Acid Substitution
To be Published
5SVW
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BU of 5svw by Molmil
Light-state Structure of Arabidopsis Thaliana Zeitlupe
分子名称: Adagio protein 1, FLAVIN MONONUCLEOTIDE
著者Zoltowski, B, Pudasaini, A.
登録日2016-08-07
公開日2017-03-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Kinetics of the LOV domain of ZEITLUPE determine its circadian function inArabidopsis.
Elife, 6, 2017
5SVU
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Structure and kinetics of the LOV domain of ZEITLUPE determine its circadian function in Arabidopsis
分子名称: Adagio protein 1, FLAVIN MONONUCLEOTIDE
著者Zoltowski, B, Pudasaini, A.
登録日2016-08-07
公開日2017-03-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.601 Å)
主引用文献Kinetics of the LOV domain of ZEITLUPE determine its circadian function inArabidopsis.
Elife, 6, 2017
5SVG
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Structure and kinetics of the LOV domain of ZEITLUPE determine its circadian function in Arabidopsis
分子名称: Adagio protein 1, FLAVIN MONONUCLEOTIDE
著者Zoltowski, B, Pudasaini, A.
登録日2016-08-05
公開日2017-03-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Kinetics of the LOV domain of ZEITLUPE determine its circadian function inArabidopsis.
Elife, 6, 2017

 

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