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1D7N
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BU of 1d7n by Molmil
SOLUTION STRUCTURE ANALYSIS OF THE MASTOPARAN WITH DETERGENTS
分子名称: PROTEIN (WASP VENOM PEPTIDE (MASTOPARAN))
著者Hori, Y, Demura, M, Iwadate, M, Niidome, T, Aoyagi, H, Asakura, T.
登録日1999-10-19
公開日2001-06-20
最終更新日2024-10-09
実験手法SOLUTION NMR
主引用文献Interaction of mastoparan with membranes studied by 1H-NMR spectroscopy in detergent micelles and by solid-state 2H-NMR and 15N-NMR spectroscopy in oriented lipid bilayers.
Eur.J.Biochem., 268, 2001
1WMX
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BU of 1wmx by Molmil
Crystal Structure of Family 30 Carbohydrate Binding Module
分子名称: COG3291: FOG: PKD repeat, SULFATE ION
著者Horiguchi, Y, Kono, M, Suzuki, A, Yamane, T, Arai, M, Sakka, K, Omiya, K.
登録日2004-07-21
公開日2004-08-03
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Family 30 Carbohydrate Binding Module
To be Published
1WZX
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BU of 1wzx by Molmil
Crystal Structure of Family 30 Carbohydrate Binding Module.
分子名称: COG3291: FOG: PKD repeat
著者Horiguchi, Y, Kono, M, Suzuki, A, Yamane, T, Arai, M, Sakka, K, Omiya, K.
登録日2005-03-10
公開日2005-03-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.52 Å)
主引用文献Crystal Structure of Family 30 Carbohydrate Binding Module
To be Published
5B2A
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BU of 5b2a by Molmil
Crystal structure of a mutant of OspA
分子名称: Outer surface protein A
著者Hori , Y, Makabe, K.
登録日2016-01-13
公開日2017-01-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Beta-sheet elasticity of peptide self-assembly mimic, PSAM, with a grafted sequence characterized by comprehensive analyses of isomorphous crystals
J Mol Liq, 290, 2019
6J48
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BU of 6j48 by Molmil
Glycine mutation on single layer beta-sheet of OspAsm1
分子名称: Outer surface protein A, TETRAETHYLENE GLYCOL
著者Makabe, K, Hori, Y.
登録日2019-01-08
公開日2019-03-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.201 Å)
主引用文献Grafting a short chameleon sequence from alpha B crystallin into a beta-sheet scaffold protein.
Proteins, 87, 2019
6J47
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OspA variant with a short chameleon sequence from alpha B crystallin
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Outer surface protein A, TETRAETHYLENE GLYCOL
著者Makabe, K, Hori, Y.
登録日2019-01-08
公開日2019-03-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Grafting a short chameleon sequence from alpha B crystallin into a beta-sheet scaffold protein.
Proteins, 87, 2019
6J49
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Grafting VLADV sequence into OspAsm1
分子名称: Outer surface protein A, TETRAETHYLENE GLYCOL
著者Makabe, K, Hori, Y.
登録日2019-01-08
公開日2019-03-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Grafting a short chameleon sequence from alpha B crystallin into a beta-sheet scaffold protein.
Proteins, 87, 2019
3GQB
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BU of 3gqb by Molmil
Crystal Structure of the A3B3 complex from V-ATPase
分子名称: V-type ATP synthase alpha chain, V-type ATP synthase beta chain
著者Meher, M, Akimoto, S, Iwata, M, Nagata, K, Hori, Y, Yoshida, M, Yokoyama, S, Iwata, S, Yokoyama, K.
登録日2009-03-24
公開日2009-11-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of A(3)B(3) complex of V-ATPase from Thermus thermophilus.
Embo J., 28, 2009
3AM2
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BU of 3am2 by Molmil
Clostridium perfringens enterotoxin
分子名称: GLYCEROL, Heat-labile enterotoxin B chain, UNKNOWN ATOM OR ION
著者Kitadokoro, K, Nishimura, K, Kamitani, S, Kimura, J, Fukui, A, Abe, H, Horiguchi, Y.
登録日2010-08-12
公開日2011-04-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献Crystal Structure of Clostridium perfringens Enterotoxin Displays Features of {beta}-Pore-forming Toxins
J.Biol.Chem., 286, 2011
6LKR
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BU of 6lkr by Molmil
Crystal structure of mouse DCAR2 CRD domain complex
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, C-type lectin domain family 4, member b1, ...
著者Omahdi, Z, Horikawa, Y, Toyonaga, K, Kakuta, Y, Yamasaki, S.
登録日2019-12-20
公開日2020-03-25
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structural insight into the recognition of pathogen-derived phosphoglycolipids by C-type lectin receptor DCAR.
J.Biol.Chem., 295, 2020
6KZR
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BU of 6kzr by Molmil
Crystal structure of mouse DCAR2 CRD domain
分子名称: C-type lectin domain family 4, member b1, CALCIUM ION, ...
著者Omahdi, Z, Horikawa, Y, Toyonaga, K, Teramoto, T, Kakuta, Y, Yamasaki, S.
登録日2019-09-25
公開日2020-03-25
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.304 Å)
主引用文献Structural insight into the recognition of pathogen-derived phosphoglycolipids by C-type lectin receptor DCAR.
J.Biol.Chem., 295, 2020
6LFJ
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BU of 6lfj by Molmil
Crystal structure of mouse DCAR2 CRD domain complex with IPM2
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, C-type lectin domain family 4, member b1, ...
著者Omahdi, Z, Horikawa, Y, Toyonaga, K, Kakuta, Y, Yamasaki, S.
登録日2019-12-03
公開日2020-03-25
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structural insight into the recognition of pathogen-derived phosphoglycolipids by C-type lectin receptor DCAR.
J.Biol.Chem., 295, 2020
1VE0
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BU of 1ve0 by Molmil
Crystal structure of uncharacterized protein ST2072 from Sulfolobus tokodaii
分子名称: SULFATE ION, ZINC ION, hypothetical protein (ST2072)
著者Tanabe, E, Horiike, Y, Tsumoto, K, Yasutake, Y, Yao, M, Tanaka, I, Kumagai, I.
登録日2004-03-26
公開日2005-03-22
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the uncharacterized protein ST2072 from Sulfolobus tokodaii
To be Published
2EC5
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BU of 2ec5 by Molmil
Crystal structures reveal a thiol-protease like catalytic triad in the C-terminal region of Pasteurella multocida toxin
分子名称: Dermonecrotic toxin
著者Kitadokoro, K, Horiguchi, Y, Kamitani, S.
登録日2007-02-09
公開日2007-03-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structures reveal a thiol protease-like catalytic triad in the C-terminal region of Pasteurella multocida toxin
Proc.Natl.Acad.Sci.Usa, 104, 2007
2EBF
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BU of 2ebf by Molmil
Crystal structures reveal a thiol-protease like catalytic triad in the C-terminal region of Pasteurella multocida toxin
分子名称: Dermonecrotic toxin, PHOSPHONATE, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
著者Kitadokoro, K, Horiguchi, Y, Kamitani, S.
登録日2007-02-08
公開日2007-03-06
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures reveal a thiol protease-like catalytic triad in the C-terminal region of Pasteurella multocida toxin
Proc.Natl.Acad.Sci.Usa, 104, 2007
2EBH
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BU of 2ebh by Molmil
Crystal structures reveal a thiol-protease like catalytic triad in the C-terminal region of Pasteurella multocida toxin
分子名称: Dermonecrotic toxin, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
著者Kitadokoro, K, Horiguchi, Y, Kamitani, S.
登録日2007-02-08
公開日2007-03-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structures reveal a thiol protease-like catalytic triad in the C-terminal region of Pasteurella multocida toxin
Proc.Natl.Acad.Sci.Usa, 104, 2007
7X2B
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BU of 7x2b by Molmil
Red fluorescent protein from Diadumene lineata
分子名称: Red fluorescent protein, SULFATE ION
著者Makabe, K, Hotta, J, Mizuno, H.
登録日2022-02-25
公開日2023-03-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Cloning and structural basis of fluorescent protein color variants from identical species of sea anemone, Diadumene lineata.
Photochem Photobiol Sci, 22, 2023
5B71
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BU of 5b71 by Molmil
Crystal structure of complement C5 in complex with SKY59
分子名称: Complement C5 beta chain, SKY59 Fab heavy chain, SKY59 Fab light chain
著者Irie, M, Shimizu, Y, Sampei, Z, Fukuzawa, T.
登録日2016-06-03
公開日2017-05-03
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Long lasting neutralization of C5 by SKY59, a novel recycling antibody, is a potential therapy for complement-mediated diseases.
Sci Rep, 7, 2017
8W6X
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BU of 8w6x by Molmil
Neutron structure of [NiFe]-hydrogenase from D. vulgaris Miyazaki F in its oxidized state
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CHLORIDE ION, FE3-S4 CLUSTER, ...
著者Hiromoto, T, Tamada, T.
登録日2023-08-30
公開日2023-09-13
最終更新日2023-11-15
実験手法NEUTRON DIFFRACTION (1.04 Å), X-RAY DIFFRACTION
主引用文献New insights into the oxidation process from neutron and X-ray crystal structures of an O 2 -sensitive [NiFe]-hydrogenase.
Chem Sci, 14, 2023
6M9L
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BU of 6m9l by Molmil
Structure-based Design, Synthesis, and Biological Evaluation of Imidazo[4,5-b]pyridine-2-one based p38 MAP Kinase Inhibitors by scaffold hopping - compound 10
分子名称: 3-benzyl-6-[(2,4-difluorophenyl)amino]-1,3-dihydro-2H-imidazo[4,5-b]pyridin-2-one, Mitogen-activated protein kinase 14
著者Lane, W, Okada, K.
登録日2018-08-23
公開日2019-04-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structure-Based Design, Synthesis, and Biological Evaluation of Imidazo[4,5-b]pyridin-2-one-Based p38 MAP Kinase Inhibitors: Part 1.
Chemmedchem, 14, 2019
6M95
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Structure-based Design, Synthesis, and Biological Evaluation of Imidazo[4,5-b]pyridine-2-one based p38 MAP Kinase Inhibitors by scaffold hopping: compound 1
分子名称: (4-benzylpiperidin-1-yl)[2-methoxy-4-(methylsulfanyl)phenyl]methanone, Mitogen-activated protein kinase 14
著者Lane, W, Okada, K.
登録日2018-08-22
公開日2019-04-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure-Based Design, Synthesis, and Biological Evaluation of Imidazo[4,5-b]pyridin-2-one-Based p38 MAP Kinase Inhibitors: Part 1.
Chemmedchem, 14, 2019
5WJJ
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Structure-based Design, Synthesis, and Biological Evaluation of Imidazo[1,2-b]pyridazine-based p38 MAP Kinase Inhibitors
分子名称: Mitogen-activated protein kinase 14, N-{4-[2-(4-fluoro-3-methylphenyl)imidazo[1,2-b]pyridazin-3-yl]pyridin-2-yl}-2-methyl-1-oxo-1lambda~5~-pyridine-4-carboxamide
著者Snell, G.P, Okada, K, Bragstad, K, Sang, B.-C.
登録日2017-07-23
公開日2018-01-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure-based design, synthesis, and biological evaluation of imidazo[1,2-b]pyridazine-based p38 MAP kinase inhibitors.
Bioorg. Med. Chem., 26, 2018
6OHD
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P38 in complex with T-3220137
分子名称: 3-(3-tert-butyl-2-oxo-2,3-dihydro-1H-imidazo[4,5-b]pyridin-6-yl)-4-methyl-N-(1,2-oxazol-3-yl)benzamide, Mitogen-activated protein kinase 14
著者Lane, W, Saikatendu, K.
登録日2019-04-05
公開日2019-11-20
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure-Based Design, Synthesis, and Biological Evaluation of Imidazo[4,5-b]Pyridin-2-one-Based p38 MAP Kinase Inhibitors: Part 2.
Chemmedchem, 14, 2019
6ANL
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Structure-based Design, Synthesis, and Biological Evaluation of Imidazo[1,2-b]pyridazine-based p38 MAP Kinase Inhibitors
分子名称: Mitogen-activated protein kinase 14, TAK-715
著者Snell, G.P, Okada, K, Bragstad, K, Sang, B.-C.
登録日2017-08-14
公開日2018-01-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure-based design, synthesis, and biological evaluation of imidazo[1,2-b]pyridazine-based p38 MAP kinase inhibitors.
Bioorg. Med. Chem., 26, 2018
6J6C
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BU of 6j6c by Molmil
Borrelia burgdorferi OspA via surface entropy reduction (form3)
分子名称: Outer surface protein A
著者Fujiwara, H, Makabe, K.
登録日2019-01-14
公開日2019-11-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Beta-sheet elasticity of peptide self-assembly mimic, PSAM, with a grafted sequence characterized by comprehensive analyses of isomorphous crystals
J Mol Liq, 290, 2019

 

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