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6BXM
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BU of 6bxm by Molmil
Crystal structure of Candidatus Methanoperedens nitroreducens Dph2 with 4Fe-4S cluster and SAM/cleaved SAM
分子名称: 5'-DEOXY-5'-METHYLTHIOADENOSINE, ALPHA-AMINOBUTYRIC ACID, Diphthamide biosynthesis enzyme Dph2, ...
著者Fenwick, M.K, Torelli, A.T, Zhang, Y, Dong, M, Kathiresan, V, Carantoa, J.D, Dzikovski, B, Lancaster, K.M, Freed, J.H, Hoffman, B.M, Lin, H, Ealick, S.E.
登録日2017-12-18
公開日2018-04-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.252 Å)
主引用文献Organometallic and radical intermediates reveal mechanism of diphthamide biosynthesis.
Science, 359, 2018
6BXN
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BU of 6bxn by Molmil
Crystal structure of Candidatus Methanoperedens nitroreducens Dph2 with 4Fe-4S cluster and SAM
分子名称: Diphthamide biosynthesis enzyme Dph2, IRON/SULFUR CLUSTER, S-ADENOSYLMETHIONINE
著者Fenwick, M.K, Torelli, A.T, Zhang, Y, Dong, M, Kathiresan, V, Carantoa, J.D, Dzikovski, B, Lancaster, K.M, Freed, J.H, Hoffman, B.M, Lin, H, Ealick, S.E.
登録日2017-12-18
公開日2018-04-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.079 Å)
主引用文献Organometallic and radical intermediates reveal mechanism of diphthamide biosynthesis.
Science, 359, 2018
6BXL
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BU of 6bxl by Molmil
Crystal structure of Pyrococcus horikoshii Dph2 with 4Fe-4S cluster and SAM
分子名称: 2-(3-amino-3-carboxypropyl)histidine synthase, IRON/SULFUR CLUSTER, S-ADENOSYLMETHIONINE
著者Torelli, A.T, Fenwick, M.K, Zhang, Y, Dong, M, Kathiresan, V, Carantoa, J.D, Dzikovski, B, Lancaster, K.M, Freed, J.H, Hoffman, B.M, Lin, H, Ealick, S.E.
登録日2017-12-18
公開日2018-04-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献Organometallic and radical intermediates reveal mechanism of diphthamide biosynthesis.
Science, 359, 2018
6BXK
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BU of 6bxk by Molmil
Crystal structure of Pyrococcus horikoshii Dph2 with 4Fe-4S cluster and MTA
分子名称: 2-(3-amino-3-carboxypropyl)histidine synthase, 5'-DEOXY-5'-METHYLTHIOADENOSINE, IRON/SULFUR CLUSTER, ...
著者Torelli, A.T, Fenwick, M.K, Zhang, Y, Dong, M, Kathiresan, V, Carantoa, J.D, Dzikovski, B, Lancaster, K.M, Freed, J.H, Hoffman, B.M, Lin, H, Ealick, S.E.
登録日2017-12-18
公開日2018-04-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.347 Å)
主引用文献Organometallic and radical intermediates reveal mechanism of diphthamide biosynthesis.
Science, 359, 2018
6BXO
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BU of 6bxo by Molmil
Crystal structure of Candidatus Methanoperedens nitroreducens Dph2 with 4Fe-4S cluster and SAH
分子名称: Diphthamide biosynthesis enzyme Dph2, IRON/SULFUR CLUSTER, S-ADENOSYL-L-HOMOCYSTEINE
著者Fenwick, M.K, Torelli, A.T, Zhang, Y, Dong, M, Kathiresan, V, Carantoa, J.D, Dzikovski, B, Lancaster, K.M, Freed, J.H, Hoffman, B.M, Lin, H, Ealick, S.E.
登録日2017-12-18
公開日2018-04-11
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.655 Å)
主引用文献Organometallic and radical intermediates reveal mechanism of diphthamide biosynthesis.
Science, 359, 2018
2RDB
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BU of 2rdb by Molmil
X-ray Crystal Structure of Toluene/o-Xylene Monooxygenase Hydroxylase I100W Mutant
分子名称: 3[N-MORPHOLINO]PROPANE SULFONIC ACID, FE (III) ION, GLYCEROL, ...
著者Murray, L.J, Garcia-Serres, R, McCormick, M.S, Davydov, R, Naik, S, Hoffman, B.M, Huynh, B.H, Lippard, S.J.
登録日2007-09-21
公開日2007-12-18
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Dioxygen activation at non-heme diiron centers: oxidation of a proximal residue in the I100W variant of toluene/o-xylene monooxygenase hydroxylase.
Biochemistry, 46, 2007
2IN4
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BU of 2in4 by Molmil
Crystal Structure of Myoglobin with Charge Neutralized Heme, ZnDMb-dme
分子名称: Myoglobin, SULFATE ION, ZINC(II)-DEUTEROPORPHYRIN DIMETHYLESTER
著者Wheeler, K.E, Nocek, J.M, Cull, D.A, Yatsunyk, L.A, Rosenzweig, A.C, Hoffman, B.M.
登録日2006-10-05
公開日2006-10-31
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Dynamic docking of cytochrome b5 with myoglobin and alpha-hemoglobin: heme-neutralization "squares" and the binding of electron-transfer-reactive configurations.
J.Am.Chem.Soc., 129, 2007
6CPD
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BU of 6cpd by Molmil
Crystal structure of PmoD soluble domain from Methylocystis sp. ATCC 49242 (Rockwell)
分子名称: COPPER (I) ION, PmoD, SULFATE ION
著者Fisher, O.S, Rosenzweig, A.C.
登録日2018-03-13
公開日2018-10-31
最終更新日2019-12-04
実験手法X-RAY DIFFRACTION (1.903 Å)
主引用文献Characterization of a long overlooked copper protein from methane- and ammonia-oxidizing bacteria.
Nat Commun, 9, 2018
4TWV
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BU of 4twv by Molmil
Horse heart myoglobin mutant (K45E/K63E/K96E) with Zn-deuteroporphyrin IX
分子名称: Myoglobin, Zinc (II) Deuteroporphyrin IX
著者Span, I, Rosenzweig, A.C.
登録日2014-07-02
公開日2016-05-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.06 Å)
主引用文献Charge-Disproportionation Symmetry Breaking Creates a Heterodimeric Myoglobin Complex with Enhanced Affinity and Rapid Intracomplex Electron Transfer.
J.Am.Chem.Soc., 138, 2016
4TWU
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BU of 4twu by Molmil
Horse heart myoglobin mutant (D44K/D60K/E85K) with Zn-deuteroporphyrin IX
分子名称: Myoglobin, SULFATE ION, Zinc (II) Deuteroporphyrin IX
著者Span, I, Rosenzweig, A.C.
登録日2014-07-02
公開日2016-05-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.08 Å)
主引用文献Charge-Disproportionation Symmetry Breaking Creates a Heterodimeric Myoglobin Complex with Enhanced Affinity and Rapid Intracomplex Electron Transfer.
J.Am.Chem.Soc., 138, 2016
4WFO
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BU of 4wfo by Molmil
manganese-substituted soybean lipoxygenase-1
分子名称: 1,2-ETHANEDIOL, ACETATE ION, MANGANESE (II) ION, ...
著者Carr, C.A.M, Scouras, A.D, Klinman, J.P.
登録日2014-09-16
公開日2015-09-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Direct detection of active-site geometries in soybean lipoxygenase-1 by ENDOR
To Be Published
8OYI
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BU of 8oyi by Molmil
particulate methane monooxygenase with 2,2,2-trifluoroethanol bound
分子名称: 1,2-DIDECANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-dihexanoyl-sn-glycero-3-phosphocholine, Ammonia monooxygenase/methane monooxygenase, ...
著者Tucci, F.J, Rosenzweig, A.C.
登録日2023-05-04
公開日2023-11-08
最終更新日2024-01-17
実験手法ELECTRON MICROSCOPY (2.19 Å)
主引用文献Product analog binding identifies the copper active site of particulate methane monooxygenase.
Nat Catal, 6, 2023
7TCU
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BU of 7tcu by Molmil
Methanobactin biosynthetic protein complex of MbnB and MbnC from Methylosinus trichosporium OB3b at 2.31 Angstrom resolution
分子名称: FE (III) ION, Methanobactin biosynthesis cassette protein MbnB, Methanobactin biosynthesis cassette protein MbnC, ...
著者Park, Y, Reyes, R.M, Rosenzweig, A.C.
登録日2021-12-28
公開日2022-03-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献A mixed-valent Fe(II)Fe(III) species converts cysteine to an oxazolone/thioamide pair in methanobactin biosynthesis.
Proc.Natl.Acad.Sci.USA, 119, 2022
7TCR
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BU of 7tcr by Molmil
Methanobactin biosynthetic protein complex of MbnB and MbnC from Methylosinus trichosporium OB3b at 2.62 Angstrom resolution
分子名称: FE (III) ION, Methanobactin biosynthesis cassette protein MbnB, Methanobactin biosynthesis cassette protein MbnC, ...
著者Park, Y, Reyes, R.M, Rosenzweig, A.C.
登録日2021-12-28
公開日2022-03-23
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献A mixed-valent Fe(II)Fe(III) species converts cysteine to an oxazolone/thioamide pair in methanobactin biosynthesis.
Proc.Natl.Acad.Sci.USA, 119, 2022
7TCW
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BU of 7tcw by Molmil
Methanobactin biosynthetic protein complex of MbnB and MbnC from Methylosinus trichosporium OB3b, H210S mutant
分子名称: FE (III) ION, Methanobactin biosynthesis cassette protein MbnB, Methanobactin biosynthesis cassette protein MbnC, ...
著者Park, Y, Reyes, R.M, Rosenzweig, A.C.
登録日2021-12-28
公開日2022-03-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献A mixed-valent Fe(II)Fe(III) species converts cysteine to an oxazolone/thioamide pair in methanobactin biosynthesis.
Proc.Natl.Acad.Sci.USA, 119, 2022
7TCX
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BU of 7tcx by Molmil
Methanobactin biosynthetic protein complex of MbnB and MbnC from Methylosinus trichosporium OB3b at 2.21 Angstrom resolution
分子名称: FE (III) ION, Methanobactin biosynthesis cassette protein MbnB, Methanobactin biosynthesis cassette protein MbnC, ...
著者Park, Y, Reyes, R.M, Rosenzweig, A.C.
登録日2021-12-28
公開日2022-03-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献A mixed-valent Fe(II)Fe(III) species converts cysteine to an oxazolone/thioamide pair in methanobactin biosynthesis.
Proc.Natl.Acad.Sci.USA, 119, 2022
3CHX
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BU of 3chx by Molmil
Crystal structure of Methylosinus trichosporium OB3b particulate methane monooxygenase (pMMO)
分子名称: 20-residue peptide, 26-residue peptide, COPPER (II) ION, ...
著者Hakemian, A.S.
登録日2008-03-10
公開日2008-07-15
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献The metal centers of particulate methane monooxygenase from Methylosinus trichosporium OB3b.
Biochemistry, 47, 2008
2HU9
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BU of 2hu9 by Molmil
X-ray structure of the Archaeoglobus fulgidus CopZ N-terminal Domain
分子名称: ACETIC ACID, FE2/S2 (INORGANIC) CLUSTER, Mercuric transport protein periplasmic component, ...
著者Sazinsky, M.H, LeMoine, B, Arguello, J.M, Rosenzweig, A.C.
登録日2006-07-26
公開日2007-07-03
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Characterization and structure of a Zn2+ and [2Fe-2S]-containing copper chaperone from Archaeoglobus fulgidus.
J.Biol.Chem., 282, 2007
8SR4
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BU of 8sr4 by Molmil
particulate methane monooxygeanse treated with potassium cyanide and copper reloaded
分子名称: Ammonia monooxygenase/methane monooxygenase, subunit C family protein, COPPER (II) ION, ...
著者Tucci, F.J, Jodts, R.J, Rosenzweig, A.C.
登録日2023-05-05
公開日2023-11-15
最終更新日2024-01-24
実験手法ELECTRON MICROSCOPY (3.12 Å)
主引用文献Product analog binding identifies the copper active site of particulate methane monooxygenase.
Nat Catal, 6, 2023
8SQW
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BU of 8sqw by Molmil
particulate methane monooxygenase crosslinked with 2,2,2-trifluoroethanol bound
分子名称: 1,2-DIDECANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-dihexanoyl-sn-glycero-3-phosphocholine, Ammonia monooxygenase/methane monooxygenase, ...
著者Tucci, F.J, Rosenzweig, A.C.
登録日2023-05-04
公開日2023-11-15
最終更新日2024-01-24
実験手法ELECTRON MICROSCOPY (2.16 Å)
主引用文献Product analog binding identifies the copper active site of particulate methane monooxygenase.
Nat Catal, 6, 2023
8SR2
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BU of 8sr2 by Molmil
particulate methane monooxygenase incubated with 4,4,4-trifluorobutanol
分子名称: 1,2-DIDECANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-dihexanoyl-sn-glycero-3-phosphocholine, Ammonia monooxygenase/methane monooxygenase, ...
著者Tucci, F.J, Rosenzweig, A.C.
登録日2023-05-05
公開日2023-11-15
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.36 Å)
主引用文献Product analogue binding identifies the copper active site of particulate methane monooyxgenase
Nat Catal, 2023
8SR1
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BU of 8sr1 by Molmil
particulate methane monooxygenase crosslinked with 4,4,4-trifluorobutanol bound
分子名称: 1,2-DIDECANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-dihexanoyl-sn-glycero-3-phosphocholine, 4,4,4-trifluorobutan-1-ol, ...
著者Tucci, F.J, Rosenzweig, A.C.
登録日2023-05-05
公開日2023-11-15
最終更新日2024-01-24
実験手法ELECTRON MICROSCOPY (2.18 Å)
主引用文献Product analog binding identifies the copper active site of particulate methane monooxygenase.
Nat Catal, 6, 2023
8SR5
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BU of 8sr5 by Molmil
particulate methane monooxygenase potassium cyanide treated
分子名称: Ammonia monooxygenase/methane monooxygenase, subunit C family protein, COPPER (II) ION, ...
著者Tucci, F.J, Rosenzweig, A.C.
登録日2023-05-05
公開日2023-11-29
最終更新日2024-01-24
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献Product analog binding identifies the copper active site of particulate methane monooxygenase.
Nat Catal, 6, 2023
3RGB
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BU of 3rgb by Molmil
Crystal structure of particulate methane monooxygenase from Methylococcus capsulatus (Bath)
分子名称: COPPER (II) ION, DINUCLEAR COPPER ION, Methane monooxygenase subunit A2, ...
著者Smith, S.M, Rosenzweig, A.C.
登録日2011-04-08
公開日2011-11-23
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structure and Characterization of Particulate Methane Monooxygenase from Methylocystis species Strain M.
Biochemistry, 50, 2011
3RJ6
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BU of 3rj6 by Molmil
Crystal Structure of Horse heart ferric myoglobin; K45E/K63E/K96E mutant
分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
著者Smith, S.M, Rosenzweig, A.C.
登録日2011-04-15
公開日2012-05-09
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献Charge-Disproportionation Symmetry Breaking Creates a Heterodimeric Myoglobin Complex with Enhanced Affinity and Rapid Intracomplex Electron Transfer.
J.Am.Chem.Soc., 138, 2016

 

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