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1V4G
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Crystal Structure of gamma-Glutamylcysteine Synthetase from Escherichia coli B
分子名称: Glutamate--cysteine ligase
著者Hibi, T, Nii, H, Nakatsu, T, Kato, H, Hiratake, J, Oda, J.
登録日2003-11-13
公開日2004-10-05
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of gamma-glutamylcysteine synthetase: insights into the mechanism of catalysis by a key enzyme for glutathione homeostasis
PROC.NATL.ACAD.SCI.USA, 101, 2004
1VA6
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BU of 1va6 by Molmil
Crystal structure of Gamma-glutamylcysteine synthetase from Escherichia Coli B complexed with Transition-state analogue
分子名称: (2S)-2-AMINO-4-[[(2R)-2-CARBOXYBUTYL](PHOSPHONO)SULFONIMIDOYL]BUTANOIC ACID, ADENOSINE-5'-DIPHOSPHATE, Glutamate--cysteine ligase, ...
著者Hibi, T, Nii, H, Nakatsu, T, Kato, H, Hiratake, J, Oda, J.
登録日2004-02-12
公開日2004-10-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of gamma-glutamylcysteine synthetase: insights into the mechanism of catalysis by a key enzyme for glutathione homeostasis
PROC.NATL.ACAD.SCI.USA, 101, 2004
2D1Q
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BU of 2d1q by Molmil
Crystal structure of the thermostable Japanese Firefly Luciferase complexed with MgATP
分子名称: ADENOSINE MONOPHOSPHATE, Luciferin 4-monooxygenase
著者Nakatsu, T, Ichiyama, S, Hiratake, J, Saldanha, A, Kobashi, N, Sakata, K, Kato, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-08-31
公開日2006-03-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for the spectral difference in luciferase bioluminescence.
Nature, 440, 2006
2D1R
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BU of 2d1r by Molmil
Crystal structure of the thermostable Japanese firefly Luciferase complexed with OXYLUCIFERIN and AMP
分子名称: 2-(6-HYDROXY-1,3-BENZOTHIAZOL-2-YL)-1,3-THIAZOL-4(5H)-ONE, ADENOSINE MONOPHOSPHATE, Luciferin 4-monooxygenase
著者Nakatsu, T, Ichiyama, S, Hiratake, J, Saldanha, A, Kobashi, N, Sakata, K, Kato, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-08-31
公開日2006-03-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural basis for the spectral difference in luciferase bioluminescence.
Nature, 440, 2006
2D1S
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BU of 2d1s by Molmil
Crystal structure of the thermostable Japanese Firefly Luciferase complexed with High-energy intermediate analogue
分子名称: 5'-O-[N-(DEHYDROLUCIFERYL)-SULFAMOYL] ADENOSINE, CHLORIDE ION, Luciferin 4-monooxygenase
著者Nakatsu, T, Ichiyama, S, Hiratake, J, Saldanha, A, Kobashi, N, Sakata, K, Kato, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-08-31
公開日2006-03-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural basis for the spectral difference in luciferase bioluminescence.
Nature, 440, 2006
2D1T
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BU of 2d1t by Molmil
Crystal structure of the thermostable Japanese Firefly Luciferase red-color emission S286N mutant complexed with High-energy intermediate analogue
分子名称: 5'-O-[N-(DEHYDROLUCIFERYL)-SULFAMOYL] ADENOSINE, CHLORIDE ION, Luciferin 4-monooxygenase
著者Nakatsu, T, Ichiyama, S, Hiratake, J, Saldanha, A, Kobashi, N, Sakata, K, Kato, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-08-31
公開日2006-03-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural basis for the spectral difference in luciferase bioluminescence.
Nature, 440, 2006
3WHR
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BU of 3whr by Molmil
Crystal structure of gamma-glutamyltranspeptidase from Bacillus subtilis (crystal soaked for 3min. in acivicin soln. )
分子名称: Gamma-glutamyltranspeptidase large chain, Gamma-glutamyltranspeptidase small chain
著者Ida, T, Suzuki, H, Fukuyama, K, Hiratake, J, Wada, K.
登録日2013-08-30
公開日2014-02-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Structure of Bacillus subtilis gamma-glutamyltranspeptidase in complex with acivicin: diversity of the binding mode of a classical and electrophilic active-site-directed glutamate analogue.
Acta Crystallogr.,Sect.D, 70, 2014
5B5T
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BU of 5b5t by Molmil
Crystal Structure of Escherichia coli Gamma-Glutamyltranspeptidase in Complex with peptidyl phosphonate inhibitor 1b
分子名称: (2~{S})-2-azanyl-4-[(2~{R})-1-(2-hydroxy-2-oxoethylamino)-1-oxidanylidene-butan-2-yl]oxyphosphonoyl-butanoic acid, CALCIUM ION, Gamma-glutamyltranspeptidase large chain, ...
著者Wada, K, Fukuyama, K.
登録日2016-05-18
公開日2016-09-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Phosphonate-based irreversible inhibitors of human gamma-glutamyl transpeptidase (GGT). GGsTop is a non-toxic and highly selective inhibitor with critical electrostatic interaction with an active-site residue Lys562 for enhanced inhibitory activity
Bioorg.Med.Chem., 24, 2016
1GSH
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BU of 1gsh by Molmil
STRUCTURE OF ESCHERICHIA COLI GLUTATHIONE SYNTHETASE AT PH 7.5
分子名称: GLUTATHIONE BIOSYNTHETIC LIGASE
著者Matsuda, K, Kato, H, Yamaguchi, H, Nishioka, T, Katsube, Y, Oda, J.
登録日1995-05-16
公開日1996-07-11
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of glutathione synthetase at optimal pH: domain architecture and structural similarity with other proteins.
Protein Eng., 9, 1996
2GLT
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BU of 2glt by Molmil
STRUCTURE OF ESCHERICHIA COLI GLUTATHIONE SYNTHETASE AT PH 6.0.
分子名称: GLUTATHIONE BIOSYNTHETIC LIGASE
著者Matsuda, K, Yamaguchi, H, Kato, H, Nishioka, T, Katsube, Y, Oda, J.
登録日1995-05-16
公開日1995-07-31
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of glutathione synthetase at optimal pH: domain architecture and structural similarity with other proteins.
Protein Eng., 9, 1996
2Z8I
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BU of 2z8i by Molmil
Crystal Structure of Escherichia coli Gamma-Glutamyltranspeptidase in Complex with Azaserine
分子名称: Gamma-glutamyltranspeptidase, O-DIAZOACETYL-L-SERINE
著者Wada, K, Irie, M, Fukuyama, K.
登録日2007-09-05
公開日2008-06-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structures of Escherichia coli gamma-glutamyltranspeptidase in complex with azaserine and acivicin: novel mechanistic implication for inhibition by glutamine antagonists
J.Mol.Biol., 380, 2008
2Z8J
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BU of 2z8j by Molmil
Crystal Structure of Escherichia coli gamma-Glutamyltranspeptidase in Complex with Azaserine prepared in the dark
分子名称: Gamma-glutamyltranspeptidase, O-DIAZOACETYL-L-SERINE
著者Wada, K, Irie, M, Fukuyama, K.
登録日2007-09-05
公開日2008-06-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structures of Escherichia coli gamma-glutamyltranspeptidase in complex with azaserine and acivicin: novel mechanistic implication for inhibition by glutamine antagonists
J.Mol.Biol., 380, 2008
2Z8K
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BU of 2z8k by Molmil
Crystal Structure of Escherichia coli gamma-Glutamyltranspeptidase in Complex with Acivicin
分子名称: (2S)-AMINO[(5S)-3-CHLORO-4,5-DIHYDROISOXAZOL-5-YL]ACETIC ACID, Gamma-glutamyltranspeptidase
著者Wada, K, Irie, M, Fukuyama, K.
登録日2007-09-05
公開日2008-06-24
最終更新日2012-04-04
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structures of Escherichia coli gamma-glutamyltranspeptidase in complex with azaserine and acivicin: novel mechanistic implication for inhibition by glutamine antagonists
J.Mol.Biol., 380, 2008
3WMG
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BU of 3wmg by Molmil
Crystal structure of an inward-facing eukaryotic ABC multidrug transporter G277V/A278V/A279V mutant in complex with an cyclic peptide inhibitor, aCAP
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ATP-binding cassette, sub-family B, ...
著者Kodan, A, Yamaguchi, T, Nakatsu, T, Sakiyama, K, Hipolito, C.J, Fujioka, A, Hirokane, R, Ikeguchi, K, Watanabe, B, Hirtake, J, Kimura, Y, Suga, H, Ueda, K, Kato, H.
登録日2013-11-18
公開日2014-04-30
最終更新日2017-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for gating mechanisms of a eukaryotic P-glycoprotein homolog.
Proc.Natl.Acad.Sci.USA, 111, 2014
2D32
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Crystal Structure of Michaelis Complex of gamma-Glutamylcysteine Synthetase
分子名称: CYSTEINE, GLUTAMIC ACID, Glutamate--cysteine ligase, ...
著者Hibi, T, Nakayama, M, Nii, H, Kurokawa, Y, Katano, H, Oda, J.
登録日2005-09-25
公開日2006-11-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis of efficient coupling peptide ligation and ATP hydrolysis by gamma-gluatamylcysteine synthetase
To be Published
2D33
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Crystal Structure of gamma-Glutamylcysteine Synthetase Complexed with Aluminum Fluoride
分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, CYSTEINE, ...
著者Hibi, T, Nakayama, M, Nii, H, Kurokawa, Y, Katano, H, Oda, J.
登録日2005-09-25
公開日2006-11-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis of efficient coupling between peptide ligation and ATP hydrolysis by gamma-gluatamylcysteine synthetase
To be Published
3WQ4
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BU of 3wq4 by Molmil
Crystal structure of beta-primeverosidase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-primeverosidase
著者Saino, H.
登録日2014-01-22
公開日2014-04-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structures of beta-primeverosidase in complex with disaccharide amidine inhibitors.
J.Biol.Chem., 289, 2014
3WHQ
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BU of 3whq by Molmil
Crystal structure of gamma-glutamyltranspeptidase from Bacillus subtilis (crystal soaked for 0 min. in acivicin soln. )
分子名称: Gamma-glutamyltranspeptidase large chain, Gamma-glutamyltranspeptidase small chain
著者Wada, K, Fukuyama, K.
登録日2013-08-30
公開日2014-02-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure of Bacillus subtilis gamma-glutamyltranspeptidase in complex with acivicin: diversity of the binding mode of a classical and electrophilic active-site-directed glutamate analogue.
Acta Crystallogr.,Sect.D, 70, 2014
3WHS
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BU of 3whs by Molmil
Crystal structure of Bacillus subtilis gamma-glutamyltranspeptidase in complex with acivicin
分子名称: (2S)-AMINO[(5S)-3-CHLORO-4,5-DIHYDROISOXAZOL-5-YL]ACETIC ACID, Gamma-glutamyltranspeptidase large chain, Gamma-glutamyltranspeptidase small chain
著者Wada, K, Fukuyama, K.
登録日2013-08-30
公開日2014-02-19
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of Bacillus subtilis gamma-glutamyltranspeptidase in complex with acivicin: diversity of the binding mode of a classical and electrophilic active-site-directed glutamate analogue.
Acta Crystallogr.,Sect.D, 70, 2014
3WQ5
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beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, natural aglycone derivative
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-phenyl-N-(6-O-beta-D-xylopyranosyl-beta-D-glucopyranosyl)ethylamidine, ...
著者Saino, H.
登録日2014-01-22
公開日2014-04-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structures of beta-primeverosidase in complex with disaccharide amidine inhibitors.
J.Biol.Chem., 289, 2014
3WME
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BU of 3wme by Molmil
Crystal structure of an inward-facing eukaryotic ABC multidrug transporter
分子名称: ATP-binding cassette, sub-family B, member 1, ...
著者Kodan, A, Yamaguchi, T, Nakatsu, T, Kato, H.
登録日2013-11-18
公開日2014-03-19
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.751 Å)
主引用文献Structural basis for gating mechanisms of a eukaryotic P-glycoprotein homolog.
Proc.Natl.Acad.Sci.USA, 111, 2014
3WQ6
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beta-Primeverosidase in complex with disaccharide substrate-analog N-beta-primeverosylamidine, artificial aglycone derivative
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(N-benzylsuccinimide-3-sulfanyl)-N-(6-O-beta-D-xylopyranosyl-beta-D-glucopyranosyl)butylamidine, ...
著者Saino, H.
登録日2014-01-22
公開日2014-04-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structures of beta-primeverosidase in complex with disaccharide amidine inhibitors.
J.Biol.Chem., 289, 2014
3WMF
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BU of 3wmf by Molmil
Crystal structure of an inward-facing eukaryotic ABC multitrug transporter G277V/A278V/A279V mutant
分子名称: ATP-binding cassette, sub-family B, member 1, ...
著者Kodan, A, Yamaguchi, T, Nakatsu, T, Kato, H.
登録日2013-11-18
公開日2014-03-19
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for gating mechanisms of a eukaryotic P-glycoprotein homolog.
Proc.Natl.Acad.Sci.USA, 111, 2014
2ZXQ
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Crystal structure of endo-alpha-N-acetylgalactosaminidase from Bifidobacterium longum (EngBF)
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Endo-alpha-N-acetylgalactosaminidase, MANGANESE (II) ION
著者Suzuki, R, Katayama, T, Ashida, H, Yamamoto, K, Kitaoka, M, Fushinobu, S.
登録日2009-01-05
公開日2009-06-16
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystallographic and mutational analyses of substrate recognition of endo-{alpha}-N-acetylgalactosaminidase from Bifidobacterium longum.
J.Biochem., 2009

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件を2024-07-17に公開中

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