Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2MTZ
DownloadVisualize
BU of 2mtz by Molmil
Haddock model of Bacillus subtilis L,D-transpeptidase in complex with a peptidoglycan hexamuropeptide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-beta-muramic acid, Putative L,D-transpeptidase YkuD, intact bacterial peptidoglycan
著者Schanda, P, Triboulet, S, Laguri, C, Bougault, C, Ayala, I, Callon, M, Arthur, M, Simorre, J.
登録日2014-09-02
公開日2015-01-14
最終更新日2023-11-15
実験手法SOLID-STATE NMR
主引用文献Atomic model of a cell-wall cross-linking enzyme in complex with an intact bacterial peptidoglycan.
J.Am.Chem.Soc., 136, 2014
1EUI
DownloadVisualize
BU of 1eui by Molmil
ESCHERICHIA COLI URACIL-DNA GLYCOSYLASE COMPLEX WITH URACIL-DNA GLYCOSYLASE INHIBITOR PROTEIN
分子名称: URACIL-DNA GLYCOSYLASE, URACIL-DNA GLYCOSYLASE INHIBITOR PROTEIN
著者Ravishankar, R, Sagar, M.B, Roy, S, Purnapatre, K, Handa, P, Varshney, U, Vijayan, M.
登録日1998-06-18
公開日1999-06-22
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献X-ray analysis of a complex of Escherichia coli uracil DNA glycosylase (EcUDG) with a proteinaceous inhibitor. The structure elucidation of a prokaryotic UDG.
Nucleic Acids Res., 26, 1998
1LQG
DownloadVisualize
BU of 1lqg by Molmil
ESCHERICHIA COLI URACIL-DNA GLYCOSYLASE COMPLEX WITH URACIL-DNA GLYCOSYLASE INHIBITOR PROTEIN
分子名称: URACIL-DNA GLYCOSYLASE, URACIL-DNA GLYCOSYLASE INHIBITOR
著者Saikrishnan, K, Sagar, M.B, Ravishankar, R, Roy, S, Purnapatre, K, Handa, P, Varshney, U, Vijayan, M.
登録日2002-05-10
公開日2002-11-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Domain closure and action of uracil DNA glycosylase (UDG): structures of new crystal forms containing the Escherichia coli enzyme and a comparative study of the known structures involving UDG.
Acta Crystallogr.,Sect.D, 58, 2002
6F3K
DownloadVisualize
BU of 6f3k by Molmil
Combined solid-state NMR, solution-state NMR and EM data for structure determination of the tetrahedral aminopeptidase TET2 from P. horikoshii
分子名称: Tetrahedral aminopeptidase, ZINC ION
著者Gauto, D.F, Estrozi, L.F, Schwieters, C.D, Effantin, G, Macek, P, Sounier, R, Kerfah, R, Sivertsen, A.C, Colletier, J.P, Boisbouvier, J, Schoehn, G, Favier, A, Schanda, P.
登録日2017-11-28
公開日2018-03-14
最終更新日2023-09-13
実験手法ELECTRON MICROSCOPY (4.1 Å), SOLID-STATE NMR, SOLUTION NMR
主引用文献Integrated NMR and cryo-EM atomic-resolution structure determination of a half-megadalton enzyme complex.
Nat Commun, 10, 2019
6R8N
DownloadVisualize
BU of 6r8n by Molmil
STRUCTURE DETERMINATION OF THE TETRAHEDRAL AMINOPEPTIDASE TET2 FROM P. HORIKOSHII BY USE OF COMBINED SOLID-STATE NMR, SOLUTION-STATE NMR AND EM DATA 4.1 A, FOLLOWED BY REAL_SPACE_REFINEMENT AT 4.1 A
分子名称: Tetrahedral aminopeptidase, ZINC ION
著者Colletier, J.-P, Gauto, D, Estrozi, L, Favier, A, Effantin, G, Schoehn, G, Boisbouvier, J, Schanda, P.
登録日2019-04-02
公開日2019-08-14
最終更新日2023-09-13
実験手法ELECTRON MICROSCOPY (4.1 Å), SOLUTION NMR
主引用文献Integrated NMR and cryo-EM atomic-resolution structure determination of a half-megadalton enzyme complex.
Nat Commun, 10, 2019
4XOK
DownloadVisualize
BU of 4xok by Molmil
Observing the overall rocking motion of a protein in a crystal.
分子名称: Ubiquitin, ZINC ION
著者Coquelle, N, Ma, P, Schanda, P, Colletier, J.P.
登録日2015-01-16
公開日2015-10-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Observing the overall rocking motion of a protein in a crystal.
Nat Commun, 6, 2015
4XOF
DownloadVisualize
BU of 4xof by Molmil
Observing the overall rocking motion of a protein in a crystal - Orthorhombic Ubiquitin crystals without Zinc.
分子名称: Ubiquitin
著者Coquelle, N, Ma, P, Schanda, P, Colletier, J.P.
登録日2015-01-16
公開日2015-10-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Observing the overall rocking motion of a protein in a crystal.
Nat Commun, 6, 2015
1S1G
DownloadVisualize
BU of 1s1g by Molmil
Crystal Structure of Kv4.3 T1 Domain
分子名称: Potassium voltage-gated channel subfamily D member 3, ZINC ION
著者Scannevin, R.H, Wang, K.W, Jow, F, Megules, J, Kopsco, D.C, Edris, W, Carroll, K.C, Lu, Q, Xu, W.X, Xu, Z.B, Katz, A.H, Olland, S, Lin, L, Taylor, M, Stahl, M, Malakian, K, Somers, W, Mosyak, L, Bowlby, M.R, Chanda, P, Rhodes, K.J.
登録日2004-01-06
公開日2004-03-23
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Two N-terminal domains of Kv4 K(+) channels regulate binding to and modulation by KChIP1.
Neuron, 41, 2004
1S1E
DownloadVisualize
BU of 1s1e by Molmil
Crystal Structure of Kv Channel-interacting protein 1 (KChIP-1)
分子名称: CALCIUM ION, Kv channel interacting protein 1
著者Scannevin, R.H, Wang, K.-W, Jow, F, Megules, J, Kopsco, D.C, Edris, W, Carroll, K.C, Lu, Q, Xu, W.-X, Xu, Z.-B, Katz, A.H, Olland, S, Lin, L, Taylor, M, Stahl, M, Malakian, K, Somers, W, Mosyak, L, Bowlby, M.R, Chanda, P, Rhodes, K.J.
登録日2004-01-06
公開日2005-01-11
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Two N-terminal domains of Kv4 K(+) channels regulate binding to and modulation by KChIP1.
Neuron, 41, 2004
4XOL
DownloadVisualize
BU of 4xol by Molmil
Observing the overall rocking motion of a protein in a crystal - Cubic Ubiquitin crystals.
分子名称: Ubiquitin, ZINC ION
著者Coquelle, N, Peixiang, M, Schanda, P, Colletier, J.P.
登録日2015-01-16
公開日2015-10-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Observing the overall rocking motion of a protein in a crystal.
Nat Commun, 6, 2015
6HWN
DownloadVisualize
BU of 6hwn by Molmil
Structure of Thermus thermophilus ClpP in complex with a tripeptide.
分子名称: ATP-dependent Clp protease proteolytic subunit, DI(HYDROXYETHYL)ETHER, Unknown tripeptide
著者Felix, J, Schanda, P, Fraga, H, Morlot, C.
登録日2018-10-12
公開日2019-09-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Mechanism of the allosteric activation of the ClpP protease machinery by substrates and active-site inhibitors.
Sci Adv, 5, 2019
6HWM
DownloadVisualize
BU of 6hwm by Molmil
Structure of Thermus thermophilus ClpP in complex with bortezomib
分子名称: ATP-dependent Clp protease proteolytic subunit, DI(HYDROXYETHYL)ETHER, N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE
著者Felix, J, Schanda, P, Fraga, H, Morlot, C.
登録日2018-10-12
公開日2019-09-18
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Mechanism of the allosteric activation of the ClpP protease machinery by substrates and active-site inhibitors.
Sci Adv, 5, 2019
2L3Z
DownloadVisualize
BU of 2l3z by Molmil
Proton-Detected 4D DREAM Solid-State NMR Structure of Ubiquitin
分子名称: Ubiquitin
著者Huber, M, Hiller, S, Schanda, P, Ernst, M, Bockmann, A, Verel, R, Meier, B.H.
登録日2010-09-27
公開日2011-02-16
最終更新日2024-05-01
実験手法SOLID-STATE NMR
主引用文献A Proton-Detected 4D Solid-State NMR Experiment for Protein Structure Determination.
Chemphyschem, 12, 2011
2K0Q
DownloadVisualize
BU of 2k0q by Molmil
Solution structure of CopK, a periplasmic protein involved in copper resistance in Cupriavidus metallidurans CH34
分子名称: Putative uncharacterized protein copK
著者Bersch, B, Favier, A, Schanda, P, Coves, J, van Aelst, S, Vallaeys, T, Wattiez, R, Mergeay, M.
登録日2008-02-12
公開日2008-05-27
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Molecular structure and metal-binding properties of the periplasmic CopK protein expressed in Cupriavidus metallidurans CH34 during copper challenge.
J.Mol.Biol., 380, 2008
1LQJ
DownloadVisualize
BU of 1lqj by Molmil
ESCHERICHIA COLI URACIL-DNA GLYCOSYLASE
分子名称: URACIL-DNA GLYCOSYLASE
著者Saikrishnan, K, Sagar, M.B, Ravishankar, R, Roy, S, Purnapatre, K, Varshney, U, Vijayan, M.
登録日2002-05-10
公開日2002-11-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献Domain closure and action of uracil DNA glycosylase (UDG): structures of new crystal forms containing the Escherichia coli enzyme and a comparative study of the known structures involving UDG.
Acta Crystallogr.,Sect.D, 58, 2002
1LQM
DownloadVisualize
BU of 1lqm by Molmil
ESCHERICHIA COLI URACIL-DNA GLYCOSYLASE COMPLEX WITH URACIL-DNA GLYCOSYLASE INHIBITOR PROTEIN
分子名称: URACIL-DNA GLYCOSYLASE, URACIL-DNA GLYCOSYLASE INHIBITOR
著者Saikrishnan, K, Sagar, M.B, Ravishankar, R, Roy, S, Purnapatre, K, Varshney, U, Vijayan, M.
登録日2002-05-10
公開日2002-11-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Domain closure and action of uracil DNA glycosylase (UDG): structures of new crystal forms containing the Escherichia coli enzyme and a comparative study of the known structures involving UDG.
Acta Crystallogr.,Sect.D, 58, 2002
4WS6
DownloadVisualize
BU of 4ws6 by Molmil
Crystal structure of Mycobacterium tuberculosis uracil-DNA glycosylase in complex with 5-aminouracil, Form I
分子名称: 1,2-ETHANEDIOL, 5-AMINO-1H-PYRIMIDINE-2,4-DIONE, CHLORIDE ION, ...
著者Arif, S.M, Geethanandan, K, Mishra, P, Surolia, A, Varshney, U, Vijayan, M.
登録日2014-10-25
公開日2015-07-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Structural plasticity in Mycobacterium tuberculosis uracil-DNA glycosylase (MtUng) and its functional implications.
Acta Crystallogr.,Sect.D, 71, 2015
4WPL
DownloadVisualize
BU of 4wpl by Molmil
Crystal structure of Mycobacterium tuberculosis uracil-DNA glycosylase in complex with uracil, Form I
分子名称: ACETATE ION, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
著者Arif, S.M, Geethanandan, K, Mishra, P, Surolia, A, Varshney, U, Vijayan, M.
登録日2014-10-20
公開日2015-07-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Structural plasticity in Mycobacterium tuberculosis uracil-DNA glycosylase (MtUng) and its functional implications.
Acta Crystallogr.,Sect.D, 71, 2015
4WRV
DownloadVisualize
BU of 4wrv by Molmil
Crystal structure of Mycobacterium tuberculosis uracil-DNA glycosylase in complex with uracil, Form III
分子名称: CHLORIDE ION, URACIL, Uracil-DNA glycosylase
著者Arif, S.M, Geethanandan, K, Mishra, P, Surolia, A, Varshney, U, Vijayan, M.
登録日2014-10-25
公開日2015-07-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Structural plasticity in Mycobacterium tuberculosis uracil-DNA glycosylase (MtUng) and its functional implications.
Acta Crystallogr.,Sect.D, 71, 2015
4WRZ
DownloadVisualize
BU of 4wrz by Molmil
Crystal structure of Mycobacterium tuberculosis uracil-DNA glycosylase in complex with 5-fluorouracil (AB), Form I
分子名称: 5-FLUOROURACIL, CHLORIDE ION, CITRIC ACID, ...
著者Arif, S.M, Geethanandan, K, Mishra, P, Surolia, A, Varshney, U, Vijayan, M.
登録日2014-10-25
公開日2015-07-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.193 Å)
主引用文献Structural plasticity in Mycobacterium tuberculosis uracil-DNA glycosylase (MtUng) and its functional implications.
Acta Crystallogr.,Sect.D, 71, 2015
4WS2
DownloadVisualize
BU of 4ws2 by Molmil
Crystal structure of Mycobacterium tuberculosis uracil-DNA glycosylase in complex with 6-aminouracil, Form I
分子名称: 6-aminopyrimidine-2,4(3H,5H)-dione, CHLORIDE ION, CITRIC ACID, ...
著者Arif, S.M, Geethanandan, K, Mishra, P, Surolia, A, Varshney, U, Vijayan, M.
登録日2014-10-25
公開日2015-07-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献Structural plasticity in Mycobacterium tuberculosis uracil-DNA glycosylase (MtUng) and its functional implications.
Acta Crystallogr.,Sect.D, 71, 2015
4WS7
DownloadVisualize
BU of 4ws7 by Molmil
Crystal structure of Mycobacterium tuberculosis uracil-DNA glycosylase in complex with 5-chlorouracil, Form II
分子名称: 1,2-ETHANEDIOL, 5-chloropyrimidine-2,4(1H,3H)-dione, CHLORIDE ION, ...
著者Arif, S.M, Geethanandan, K, Mishra, P, Surolia, A, Varshney, U, Vijayan, M.
登録日2014-10-25
公開日2015-07-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Structural plasticity in Mycobacterium tuberculosis uracil-DNA glycosylase (MtUng) and its functional implications.
Acta Crystallogr.,Sect.D, 71, 2015
4WRX
DownloadVisualize
BU of 4wrx by Molmil
Crystal structure of Mycobacterium tuberculosis uracil-DNA glycosylase, Form V
分子名称: CHLORIDE ION, Uracil-DNA glycosylase
著者Arif, S.M, Geethanandan, K, Mishra, P, Surolia, A, Varshney, U, Vijayan, M.
登録日2014-10-25
公開日2015-07-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural plasticity in Mycobacterium tuberculosis uracil-DNA glycosylase (MtUng) and its functional implications.
Acta Crystallogr.,Sect.D, 71, 2015
4WS0
DownloadVisualize
BU of 4ws0 by Molmil
Crystal structure of Mycobacterium tuberculosis uracil-DNA glycosylase in complex with 5-fluorouracil (A), Form II
分子名称: 1,2-ETHANEDIOL, 5-FLUOROURACIL, CHLORIDE ION, ...
著者Arif, S.M, Geethanandan, K, Mishra, P, Surolia, A, Varshney, U, Vijayan, M.
登録日2014-10-25
公開日2015-07-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.974 Å)
主引用文献Structural plasticity in Mycobacterium tuberculosis uracil-DNA glycosylase (MtUng) and its functional implications.
Acta Crystallogr.,Sect.D, 71, 2015
4WS3
DownloadVisualize
BU of 4ws3 by Molmil
Crystal structure of Mycobacterium tuberculosis uracil-DNA glycosylase in complex with 6-aminouracil, Form IV
分子名称: 6-aminopyrimidine-2,4(3H,5H)-dione, CHLORIDE ION, DIMETHYL SULFOXIDE, ...
著者Arif, S.M, Geethanandan, K, Mishra, P, Surolia, A, Varshney, U, Vijayan, M.
登録日2014-10-25
公開日2015-07-15
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural plasticity in Mycobacterium tuberculosis uracil-DNA glycosylase (MtUng) and its functional implications.
Acta Crystallogr.,Sect.D, 71, 2015

 

12>

227111

件を2024-11-06に公開中

PDB statisticsPDBj update infoContact PDBjnumon