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101D
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BU of 101d by Molmil
REFINEMENT OF NETROPSIN BOUND TO DNA: BIAS AND FEEDBACK IN ELECTRON DENSITY MAP INTERPRETATION
分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(CBR)P*GP*CP*G)-3'), MAGNESIUM ION, NETROPSIN
著者Goodsell, D.S, Kopka, M.L, Dickerson, R.E.
登録日1994-12-14
公開日1995-02-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Refinement of netropsin bound to DNA: bias and feedback in electron density map interpretation.
Biochemistry, 34, 1995
1LEY
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BU of 1ley by Molmil
STRUCTURE OF A DICATIONIC MONOIMIDAZOLE LEXITROPSIN BOUND TO DNA (ORIENTATION 2)
分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), MONOIMIDAZOLE LEXITROPSIN
著者Goodsell, D.S, Ng, H.L, Kopka, M.L, Lown, J.W, Dickerson, R.E.
登録日1995-10-10
公開日1996-04-03
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure of a dicationic monoimidazole lexitropsin bound to DNA.
Biochemistry, 34, 1995
1LEX
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BU of 1lex by Molmil
STRUCTURE OF A DICATIONIC MONOIMIDAZOLE LEXITROPSIN BOUND TO DNA (ORIENTATION 1)
分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), MONOIMIDAZOLE LEXITROPSIN
著者Goodsell, D.S, Ng, H.L, Kopka, M.L, Lown, J.W, Dickerson, R.E.
登録日1995-10-10
公開日1996-04-03
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure of a dicationic monoimidazole lexitropsin bound to DNA.
Biochemistry, 34, 1995
126D
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BU of 126d by Molmil
CRYSTAL STRUCTURE OF CATGGCCATG AND ITS IMPLICATIONS FOR A-TRACT BENDING MODELS
分子名称: DNA (5'-D(*CP*AP*TP*GP*GP*CP*CP*AP*TP*G)-3')
著者Goodsell, D.S, Kopka, M.L, Cascio, D, Dickerson, R.E.
登録日1993-06-14
公開日1993-10-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of CATGGCCATG and its implications for A-tract bending models.
Proc.Natl.Acad.Sci.USA, 90, 1993
167D
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BU of 167d by Molmil
THE CRYSTAL STRUCTURE OF C-C-A-T-T-A-A-T-G-G: IMPLICATIONS FOR BENDING OF B-DNA AT T-A STEPS
分子名称: DNA (5'-D(*CP*CP*AP*TP*TP*AP*AP*TP*GP*G)-3')
著者Goodsell, D.S, Kaczor-Grzeskowiak, M, Dickerson, R.E.
登録日1994-04-04
公開日1994-08-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The crystal structure of C-C-A-T-T-A-A-T-G-G. Implications for bending of B-DNA at T-A steps.
J.Mol.Biol., 239, 1994
196D
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BU of 196d by Molmil
CRYSTAL STRUCTURE OF C-T-C-T-C-G-A-G-A-G: IMPLICATIONS FOR THE STRUCTURE OF THE HOLLIDAY JUNCTION
分子名称: CALCIUM ION, DNA (5'-D(*CP*TP*CP*TP*CP*GP*AP*GP*AP*G)-3')
著者Goodsell, D.S, Grzeskowiak, K, Dickerson, R.E.
登録日1994-11-07
公開日1995-02-27
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of C-T-C-T-C-G-A-G-A-G. Implications for the structure of the Holliday junction.
Biochemistry, 34, 1995
334D
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BU of 334d by Molmil
DEFINING GC-SPECIFICITY IN THE MINOR GROOVE: SIDE-BY-SIDE BINDING OF THE DI-IMIDAZOLE LEXITROPSIN TO C-A-T-G-G-C-C-A-T-G
分子名称: CALCIUM ION, DIIMIDAZOLE LEXITROPSIN, DNA (5'-D(*CP*AP*TP*GP*GP*CP*CP*AP*TP*G)-3')
著者Kopka, M.L, Goodsell, D.S, Dickerson, R.E.
登録日1997-05-22
公開日1997-08-29
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Defining GC-specificity in the minor groove: side-by-side binding of the di-imidazole lexitropsin to C-A-T-G-G-C-C-A-T-G.
Structure, 5, 1997
1ZPA
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BU of 1zpa by Molmil
HIV Protease with Scripps AB-3 Inhibitor
分子名称: Pol polyprotein, TERT-BUTYL 4-[({[1-((1S,2R)-1-BENZYL-2-HYDROXY-3-{ISOBUTYL[(4-METHOXYPHENYL)SULFONYL]AMINO}PROPYL)-1H-1,2,3-TRIAZOL-4-YL]METHYL}AMINO)CARBONYL]BENZYLCARBAMATE
著者Brik, A, Alexandratos, J, Lin, Y.C, Elder, J.H, Olson, A.J, Wlodawer, A, Goodsell, D.S, Wong, C.H.
登録日2005-05-16
公開日2005-05-31
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献1,2,3-triazole as a peptide surrogate in the rapid synthesis of HIV-1 protease inhibitors
Chembiochem, 6, 2005
1ZP8
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BU of 1zp8 by Molmil
HIV Protease with inhibitor AB-2
分子名称: Pol polyprotein, [1-((1S,2R)-1-BENZYL-2-HYDROXY-3-{ISOBUTYL[(4-METHOXYPHENYL)SULFONYL]AMINO}PROPYL)-1H-1,2,3-TRIAZOL-4-YL]METHYL (1R,2R)-2-HYDROXY-2,3-DIHYDRO-1H-INDEN-1-YLCARBAMATE
著者Brik, A, Alexandratos, J.N, Elder, J.H, Olson, A.J, Wlodawer, A, Goodsell, D.S, Wong, C.H.
登録日2005-05-16
公開日2005-06-21
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献1,2,3-triazole as a peptide surrogate in the rapid synthesis of HIV-1 protease inhibitors.
Chembiochem, 6, 2005
274D
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BU of 274d by Molmil
CRYSTAL STRUCTURE OF A COVALENT DNA-DRUG ADDUCT: ANTHRAMYCIN BOUND TO C-C-A-A-C-G-T-T-G-G, AND A MOLECULAR EXPLANATION OF SPECIFICITY
分子名称: ANTHRAMYCIN, DNA (5'-D(*CP*CP*AP*AP*CP*GP*TP*TP*(DRUG)GP*G)-3')
著者Kopka, M.L, Goodsell, D.S, Baikalov, I, Grzeskowiak, K, Cascio, D, Dickerson, R.E.
登録日1994-04-28
公開日1994-10-21
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of a covalent DNA-drug adduct: anthramycin bound to C-C-A-A-C-G-T-T-G-G and a molecular explanation of specificity.
Biochemistry, 33, 1994
158D
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BU of 158d by Molmil
CRYSTALLOGRAPHIC ANALYSIS OF C-C-A-A-G-C-T-T-G-G AND ITS IMPLICATIONS FOR BENDING IN B-DNA
分子名称: CALCIUM ION, DNA (5'-D(*CP*CP*AP*AP*GP*CP*TP*TP*GP*G)-3')
著者Grzeskowiak, K, Goodsell, D.S, Kaczor-Grzeskowiak, M, Cascio, D, Dickerson, R.E.
登録日1994-02-03
公開日1994-05-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystallographic analysis of C-C-A-A-G-C-T-T-G-G and its implications for bending in B-DNA.
Biochemistry, 32, 1993
1D30
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BU of 1d30 by Molmil
THE STRUCTURE OF DAPI BOUND TO DNA
分子名称: 6-AMIDINE-2-(4-AMIDINO-PHENYL)INDOLE, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')
著者Larsen, T, Goodsell, D.S, Cascio, D, Grzeskowiak, K, Dickerson, R.E.
登録日1991-01-04
公開日1992-04-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The structure of DAPI bound to DNA.
J.Biomol.Struct.Dyn., 7, 1989
8BNA
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BU of 8bna by Molmil
BINDING OF HOECHST 33258 TO THE MINOR GROOVE OF B-DNA
分子名称: 2'-(4-HYDROXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION
著者Pjura, P.E, Grzeskowiak, K, Dickerson, R.E.
登録日1986-08-29
公開日1987-01-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Binding of Hoechst 33258 to the minor groove of B-DNA.
J.Mol.Biol., 197, 1987
8F2W
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BU of 8f2w by Molmil
Structure of a B-Form Dodecamer: 5'-CGCGAATTCGCG-3
分子名称: DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION
著者Ogbonna, E.N, Wilson, W.D.
登録日2022-11-08
公開日2023-02-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献X-ray Structure Characterization of the Selective Recognition of AT Base Pair Sequences.
Acs Bio Med Chem Au, 3, 2023
5W4O
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BU of 5w4o by Molmil
Structure of the R18A mutant of the HIV-1 capsid protein
分子名称: CHLORIDE ION, Capsid protein p24, IODIDE ION
著者Gres, A.T, Kirby, K.A, Sarafianos, S.G.
登録日2017-06-12
公開日2018-06-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.093 Å)
主引用文献Novel Intersubunit Interaction Critical for HIV-1 Core Assembly Defines a Potentially Targetable Inhibitor Binding Pocket.
MBio, 10, 2019
5W4Q
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BU of 5w4q by Molmil
Structure of the R18A/E28A mutant of the HIV-1 capsid protein
分子名称: CHLORIDE ION, Capsid protein p24, IODIDE ION
著者Gres, A.T, Kirby, K.A, Sarafianos, S.G.
登録日2017-06-12
公開日2018-06-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.285 Å)
主引用文献Novel Intersubunit Interaction Critical for HIV-1 Core Assembly Defines a Potentially Targetable Inhibitor Binding Pocket.
MBio, 10, 2019
5W4P
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BU of 5w4p by Molmil
Structure of the E28A mutant of the HIV-1 capsid protein
分子名称: CHLORIDE ION, Capsid protein p24, IODIDE ION
著者Gres, A.T, Kirby, K.A, Sarafianos, S.G.
登録日2017-06-12
公開日2018-06-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Novel Intersubunit Interaction Critical for HIV-1 Core Assembly Defines a Potentially Targetable Inhibitor Binding Pocket.
MBio, 10, 2019
1DN9
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BU of 1dn9 by Molmil
STRUCTURE OF AN ALTERNATING-B DNA HELIX AND ITS RELATIONSHIP TO A-TRACT DNA
分子名称: DNA (5'-D(*CP*GP*CP*AP*TP*AP*TP*AP*TP*GP*CP*G)-3')
著者Yoon, C, Dickerson, R.E.
登録日1989-04-25
公開日1990-04-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of an alternating-B DNA helix and its relationship to A-tract DNA.
Proc.Natl.Acad.Sci.USA, 85, 1988
252D
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CRYSTAL STRUCTURE OF THE B-DNA DECAMER D(CGCAATTGCG)2; SEQUENCE-DEPENDENT CROSSED HELIX PACKING
分子名称: DNA (5'-D(*CP*GP*CP*AP*AP*TP*TP*GP*CP*G)-3')
著者Wood, A.A, Nunn, C.M, Trent, J.O, Neidle, S.
登録日1996-03-07
公開日1996-04-09
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Sequence-dependent crossed helix packing in the crystal structure of a B-DNA decamer yields a detailed model for the Holliday junction.
J.Mol.Biol., 269, 1997

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