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8XFQ
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BU of 8xfq by Molmil
Structure of the alginate epimerase/lyase complexed with penta-mannuronic acid
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, TRIETHYLENE GLYCOL, ...
著者Fujiwara, T.
登録日2023-12-14
公開日2024-05-15
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural basis for the minimal bifunctional alginate epimerase AlgE3 from Azotobacter chroococcum.
Febs Lett., 2024
8XFR
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BU of 8xfr by Molmil
Structure of the alginate epimerase/lyase complexed with tetra-mannuronic acid
分子名称: ACETATE ION, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Fujiwara, T.
登録日2023-12-14
公開日2024-05-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for the minimal bifunctional alginate epimerase AlgE3 from Azotobacter chroococcum.
Febs Lett., 2024
4I86
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BU of 4i86 by Molmil
Crystal structure of PilZ domain of CeSA from cellulose synthesizing bacterium
分子名称: Cellulose synthase 1
著者Fujiwara, T, Komoda, K, Sakurai, N, Tanaka, I, Yao, M.
登録日2012-12-03
公開日2013-04-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.098 Å)
主引用文献The c-di-GMP recognition mechanism of the PilZ domain of bacterial cellulose synthase subunit A
Biochem.Biophys.Res.Commun., 431, 2013
8JA4
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BU of 8ja4 by Molmil
Structure of the alginate epimerase/lyase
分子名称: CALCIUM ION, DI(HYDROXYETHYL)ETHER, TRIETHYLENE GLYCOL, ...
著者Fujiwara, T.
登録日2023-05-05
公開日2024-05-08
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Structural basis for the minimal bifunctional alginate epimerase AlgE3 from Azotobacter chroococcum.
Febs Lett., 2024
8JA6
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BU of 8ja6 by Molmil
Structure of the alginate epimerase/lyase complexed with tri-mannuronic acid
分子名称: ACETATE ION, CALCIUM ION, beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid, ...
著者Fujiwara, T.
登録日2023-05-05
公開日2024-05-08
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for the minimal bifunctional alginate epimerase AlgE3 from Azotobacter chroococcum.
Febs Lett., 2024
8JAZ
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BU of 8jaz by Molmil
Structure of the alginate epimerase/lyase complexed with di-mannuronic acid
分子名称: CALCIUM ION, beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid, mannuronan 5-epimerase
著者Fujiwara, T.
登録日2023-05-07
公開日2024-05-08
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Structural basis for the minimal bifunctional alginate epimerase AlgE3 from Azotobacter chroococcum.
Febs Lett., 2024
7F81
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BU of 7f81 by Molmil
Structure of the bacterial cellulose synthase subunit Z from Enterobacter sp. CJF-002
分子名称: GLYCEROL, Glucanase, S,R MESO-TARTARIC ACID
著者Fujiwara, T, Fujishima, A, Yao, M.
登録日2021-06-30
公開日2022-02-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Structural snapshot of a glycoside hydrolase family 8 endo-beta-1,4-glucanase capturing the state after cleavage of the scissile bond.
Acta Crystallogr.,Sect.D, 78, 2022
7F82
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BU of 7f82 by Molmil
Structure of the bacterial cellulose synthase subunit Z in complex with cellooligosaccharides from Enterobacter sp. CJF-002
分子名称: Glucanase, S,R MESO-TARTARIC ACID, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose, ...
著者Fujiwara, T, Fujishima, A, Yao, M.
登録日2021-06-30
公開日2022-02-09
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural snapshot of a glycoside hydrolase family 8 endo-beta-1,4-glucanase capturing the state after cleavage of the scissile bond.
Acta Crystallogr.,Sect.D, 78, 2022
3VW5
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BU of 3vw5 by Molmil
Crystal structure of sugar epimerase from ruminal bacterium
分子名称: Cellobiose 2-epimerase
著者Fujiwara, T, Saburi, W, Tanaka, I, Yao, M.
登録日2012-08-02
公開日2013-06-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of Ruminococcus albus cellobiose 2-epimerase: structural insights into epimerization of unmodified sugar
Febs Lett., 587, 2013
3WKH
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BU of 3wkh by Molmil
Crystal structure of cellobiose 2-epimerase in complex with epilactose
分子名称: CHLORIDE ION, Cellobiose 2-epimerase, PHOSPHATE ION, ...
著者Fujiwara, T, Saburi, W, Tanaka, I, Yao, M.
登録日2013-10-21
公開日2013-12-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.644 Å)
主引用文献Structural Insights into the Epimerization of beta-1,4-Linked Oligosaccharides Catalyzed by Cellobiose 2-Epimerase, the Sole Enzyme Epimerizing Non-anomeric Hydroxyl Groups of Unmodified Sugars
J.Biol.Chem., 289, 2014
3WKG
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BU of 3wkg by Molmil
Crystal structure of cellobiose 2-epimerase in complex with glucosylmannose
分子名称: CHLORIDE ION, Cellobiose 2-epimerase, PHOSPHATE ION, ...
著者Fujiwara, T, Saburi, W, Tanaka, I, Yao, M.
登録日2013-10-21
公開日2013-12-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Structural Insights into the Epimerization of beta-1,4-Linked Oligosaccharides Catalyzed by Cellobiose 2-Epimerase, the Sole Enzyme Epimerizing Non-anomeric Hydroxyl Groups of Unmodified Sugars
J.Biol.Chem., 289, 2014
3WKI
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BU of 3wki by Molmil
Crystal structure of cellobiose 2-epimerase in complex with cellobiitol
分子名称: CHLORIDE ION, Cellobiose 2-epimerase, PHOSPHATE ION, ...
著者Fujiwara, T, Saburi, W, Tanaka, I, Yao, M.
登録日2013-10-21
公開日2013-12-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.191 Å)
主引用文献Structural Insights into the Epimerization of beta-1,4-Linked Oligosaccharides Catalyzed by Cellobiose 2-Epimerase, the Sole Enzyme Epimerizing Non-anomeric Hydroxyl Groups of Unmodified Sugars
J.Biol.Chem., 289, 2014
3WKF
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BU of 3wkf by Molmil
Crystal structure of cellobiose 2-epimerase
分子名称: CHLORIDE ION, Cellobiose 2-epimerase, PHOSPHATE ION
著者Fujiwara, T, Saburi, W, Tanaka, I, Yao, M.
登録日2013-10-21
公開日2013-12-25
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.743 Å)
主引用文献Structural Insights into the Epimerization of beta-1,4-Linked Oligosaccharides Catalyzed by Cellobiose 2-Epimerase, the Sole Enzyme Epimerizing Non-anomeric Hydroxyl Groups of Unmodified Sugars
J.Biol.Chem., 289, 2014
6M0Q
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BU of 6m0q by Molmil
Hydroxylamine oxidoreductase from Nitrosomonas europaea
分子名称: Aerobic hydroxylamine oxidoreductase, DI(HYDROXYETHYL)ETHER, HEME C, ...
著者Fujiwara, T, Fujimoto, Z, Nishigaya, Y, Yamazaki, T.
登録日2020-02-22
公開日2021-03-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Juglone, a plant-derived 1,4-naphthoquinone, binds to hydroxylamine oxidoreductase and inhibits the electron transfer to cytochrome c 554.
Appl.Environ.Microbiol., 89, 2023
6M0P
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BU of 6m0p by Molmil
Hydroxylamine oxidoreductase in complex with juglone
分子名称: 5-hydroxynaphthalene-1,4-dione, Aerobic hydroxylamine oxidoreductase, DI(HYDROXYETHYL)ETHER, ...
著者Fujiwara, T, Fujimoto, Z, Nishigaya, Y, Yamazaki, T.
登録日2020-02-22
公開日2021-03-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献Juglone, a plant-derived 1,4-naphthoquinone, binds to hydroxylamine oxidoreductase and inhibits the electron transfer to cytochrome c 554.
Appl.Environ.Microbiol., 89, 2023
2E8D
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BU of 2e8d by Molmil
3D Structure of amyloid protofilaments of beta2-microglobulin fragment probed by solid-state NMR
分子名称: Beta-2-microglobulin
著者Fujiwara, T.
登録日2007-01-19
公開日2007-02-13
最終更新日2024-05-01
実験手法SOLID-STATE NMR
主引用文献3D structure of amyloid protofilaments of beta2-microglobulin fragment probed by solid-state NMR
Proc.Natl.Acad.Sci.Usa, 103, 2006
8HEW
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BU of 8hew by Molmil
Potato 14-3-3 St14f
分子名称: 14-3-3 protein, StFDL1 peptide
著者Taoka, K, Kawahara, I, Shinya, S, Harada, K, Muranaka, T, Furuita, K, Nakagawa, A, Fujiwara, T, Tsuji, H, Kojima, C.
登録日2022-11-08
公開日2023-09-20
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Multifunctional chemical inhibitors of the florigen activation complex discovered by structure-based high-throughput screening.
Plant J., 112, 2022
4U5X
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BU of 4u5x by Molmil
Structure of plant small GTPase OsRac1 complexed with the non-hydrolyzable GTP analog GMPPNP
分子名称: GLYCEROL, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ...
著者Ohki, I, Kosami, K, Fujiwara, T, Nakagawa, A, Shimamoto, K, Kojima, C.
登録日2014-07-25
公開日2014-08-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The Crystal Structure of the Plant Small GTPase OsRac1 Reveals Its Mode of Binding to NADPH Oxidase
J.Biol.Chem., 289, 2014
6LLQ
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BU of 6llq by Molmil
Solution NMR structure of de novo Rossmann2x2 fold with most of the core mutated to valine, R2x2_VAL88
分子名称: VAL88
著者Kobayashi, N, Sugiki, T, Fujiwara, T, Koga, R, Yamamoto, M, Kosugi, T, Koga, N.
登録日2019-12-23
公開日2020-12-02
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Robust folding of a de novo designed ideal protein even with most of the core mutated to valine.
Proc.Natl.Acad.Sci.USA, 117, 2020
1R77
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BU of 1r77 by Molmil
Crystal structure of the cell wall targeting domain of peptidylglycan hydrolase ALE-1
分子名称: Cell Wall Targeting Domain of Glycylglycine Endopeptidase ALE-1
著者Lu, J.Z, Fujiwara, T, Komatsuzawa, H, Sugai, M, Sakon, J.
登録日2003-10-20
公開日2005-04-12
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Cell Wall-targeting Domain of Glycylglycine Endopeptidase Distinguishes among Peptidoglycan Cross-bridges.
J.Biol.Chem., 281, 2006
1QS4
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BU of 1qs4 by Molmil
Core domain of HIV-1 integrase complexed with Mg++ and 1-(5-chloroindol-3-yl)-3-hydroxy-3-(2H-tetrazol-5-yl)-propenone
分子名称: 1-(5-CHLOROINDOL-3-YL)-3-HYDROXY-3-(2H-TETRAZOL-5-YL)-PROPENONE, MAGNESIUM ION, PROTEIN (HIV-1 INTEGRASE (E.C.2.7.7.49))
著者Goldgur, Y, Craigie, R, Fujiwara, T, Yoshinaga, T, Davies, D.R.
登録日1999-06-25
公開日1999-11-17
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of the HIV-1 integrase catalytic domain complexed with an inhibitor: a platform for antiviral drug design.
Proc.Natl.Acad.Sci.USA, 96, 1999
5WS3
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BU of 5ws3 by Molmil
Crystal structures of human orexin 2 receptor bound to the selective antagonist EMPA determined by serial femtosecond crystallography at SACLA
分子名称: N-ethyl-2-[(6-methoxypyridin-3-yl)-(2-methylphenyl)sulfonyl-amino]-N-(pyridin-3-ylmethyl)ethanamide, OLEIC ACID, Orexin receptor type 2,GlgA glycogen synthase,Orexin receptor type 2, ...
著者Suno, R, Kimura, K, Nakane, T, Yamashita, K, Wang, J, Fujiwara, T, Yamanaka, Y, Im, D, Tsujimoto, H, Sasanuma, M, Horita, S, Hirokawa, T, Nango, E, Tono, K, Kameshima, T, Hatsui, T, Joti, Y, Yabashi, M, Shimamoto, K, Yamamoto, M, Rosenbaum, D.M, Iwata, S, Shimamura, T, Kobayashi, T.
登録日2016-12-05
公開日2017-12-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structures of Human Orexin 2 Receptor Bound to the Subtype-Selective Antagonist EMPA.
Structure, 26, 2018
5JR0
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BU of 5jr0 by Molmil
Domain 4 Segment 6 of voltage-gated sodium channel Nav1.4
分子名称: Sodium channel protein type 4 subunit alpha
著者Niitsu, A, Egawa, A, Ikeda, K, Tachibana, K, Fujiwara, T.
登録日2016-05-05
公開日2017-05-17
実験手法SOLID-STATE NMR
主引用文献Veratridine binding to a transmembrane segment of mammalian sodium channel Nav1.4 determined by solid-state NMR
To Be Published
2ND5
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BU of 2nd5 by Molmil
Lysine dimethylated FKBP12
分子名称: Peptidyl-prolyl cis-trans isomerase FKBP1A
著者Hattori, Y, Sebera, J, Sychrovsky, V, Furuita, K, Sugiki, T, Ohki, I, Ikegami, T, Kobayashi, N, Tanaka, Y, Fujiwara, T, Kojima, C.
登録日2016-05-05
公開日2017-05-17
実験手法SOLUTION NMR
主引用文献NMR Observation of Protein Surface Salt Bridges at Neutral pH
To be Published
7BQN
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BU of 7bqn by Molmil
Solution NMR structure of fold-C Rei; de novo designed protein with an asymmetric all-alpha topology
分子名称: Rei
著者Kobayashi, N, Sugiki, T, Fujiwara, T, Sakuma, K, Kosugi, T, Koga, R, Koga, N.
登録日2020-03-25
公開日2021-04-07
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Design of complicated all-alpha protein structures
Nat.Struct.Mol.Biol., 2024

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件を2024-06-12に公開中

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