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Co-crystal structure of 3-ethyl-2-(isopropylamino)-7-(pyridin-3-yl)thieno[3,2-d]pyrimidin-4(3H)-one bound to PDE7A
分子名称:	3-ethyl-2-(propan-2-ylamino)-7-(pyridin-3-yl)thieno[3,2-d]pyrimidin-4(3H)-one, High affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A, MAGNESIUM ION, ...
著者	Endo, Y, Kawai, K, Asano, T, Amano, S, Asanuma, Y, Sawada, K, Onodera, Y, Ueo, N, Takahashi, N, Sonoda, Y, Kamei, N, Irie, T.
登録日	2015-02-09
公開日	2015-04-08
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (2.2 Å)
主引用文献	2-(Isopropylamino)thieno[3,2-d]pyrimidin-4(3H)-one derivatives as selective phosphodiesterase 7 inhibitors with potent in vivo efficacy Bioorg.Med.Chem.Lett., 25, 2015

4PM0

PDE7A catalytic domain in complex with 2-(Cyclopentylamino)thieno[3,2-d]pyrimidin-4(3H)-one derivative
分子名称:	2-(cyclopentylamino)-3-ethyl-7-ethynylthieno[3,2-d]pyrimidin-4(3H)-one, High affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A, MAGNESIUM ION, ...
著者	Kawai, K, Endo, Y, Asano, T, Amano, S, Sawada, K, Ueo, N, Takahashi, N, Sonoda, Y, Kamei, N, Nagata, N.
登録日	2014-05-20
公開日	2014-12-03
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (2.1 Å)
主引用文献	Discovery of 2-(Cyclopentylamino)thieno[3,2-d]pyrimidin-4(3H)-one Derivatives as a New Series of Potent Phosphodiesterase 7 Inhibitors. J.Med.Chem., 57, 2014

1V2X

TrmH
分子名称:	PHOSPHATE ION, S-ADENOSYLMETHIONINE, tRNA (Gm18) methyltransferase
著者	Nureki, O, Watanabe, K, Fukai, S, Ishii, R, Endo, Y, Hori, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日	2003-10-17
公開日	2004-05-04
最終更新日	2023-12-27
実験手法	X-RAY DIFFRACTION (1.5 Å)
主引用文献	Deep Knot Structure for Construction of Active Site and Cofactor Binding Site of tRNA Modification Enzyme STRUCTURE, 12, 2004

2DVY

Crystal structure of restriction endonucleases PabI
分子名称:	Restriction endonuclease PabI
著者	Miyazono, K, Watanabe, M, Kamo, M, Sawasaki, T, Nagata, K, Endo, Y, Tanokura, M, Kobayashi, I.
登録日	2006-08-01
公開日	2007-05-08
最終更新日	2024-03-13
実験手法	X-RAY DIFFRACTION (3 Å)
主引用文献	Novel protein fold discovered in the PabI family of restriction enzymes Nucleic Acids Res., 35, 2007

2J64

H-ficolin
分子名称:	CALCIUM ION, FICOLIN-3
著者	Garlatti, V, Gaboriaud, C.
登録日	2006-09-25
公開日	2007-01-23
最終更新日	2023-12-13
実験手法	X-RAY DIFFRACTION (2.2 Å)
主引用文献	Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins. Embo J., 26, 2007

2J3F

L-ficolin complexed to N-acetyl-D-galactosamine
分子名称:	2-acetamido-2-deoxy-alpha-D-galactopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, ...
著者	Garlatti, V, Gaboriaud, C.
登録日	2006-08-21
公開日	2007-01-23
最終更新日	2023-12-13
実験手法	X-RAY DIFFRACTION (2.8 Å)
主引用文献	Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins. Embo J., 26, 2007

2J60

H-ficolin complexed to D-fucose
分子名称:	ACETATE ION, CALCIUM ION, FICOLIN-3, ...
著者	Garlatti, V, Gaboriaud, C.
登録日	2006-09-21
公開日	2007-01-23
最終更新日	2023-12-13
実験手法	X-RAY DIFFRACTION (1.8 Å)
主引用文献	Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins. Embo J., 26, 2007

2J0H

L-ficolin complexed to acetyl-choline
分子名称:	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETYLCHOLINE, CALCIUM ION, ...
著者	Garlatti, V, Gaboriaud, C.
登録日	2006-08-03
公開日	2007-01-23
最終更新日	2023-12-13
実験手法	X-RAY DIFFRACTION (2.85 Å)
主引用文献	Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins. Embo J., 26, 2007

2J5Z

H-ficolin complexed to galactose
分子名称:	ACETATE ION, CALCIUM ION, FICOLIN-3, ...
著者	Garlatti, V, Gaboriaud, C.
登録日	2006-09-21
公開日	2007-01-23
最終更新日	2023-12-13
実験手法	X-RAY DIFFRACTION (1.73 Å)
主引用文献	Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins. Embo J., 26, 2007

2J2P

L-ficolin complexed to N-acetyl-cystein (150mM)
分子名称:	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, FICOLIN-2, ...
著者	Garlatti, V, Gaboriaud, C.
登録日	2006-08-17
公開日	2007-01-23
最終更新日	2020-07-29
実験手法	X-RAY DIFFRACTION (2.8 Å)
主引用文献	Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins. Embo J., 26, 2007

2J61

L-ficolin complexed to N-acetylglucosamine (forme C)
分子名称:	2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, FICOLIN-2
著者	Garlatti, V, Gaboriaud, C.
登録日	2006-09-21
公開日	2007-01-23
最終更新日	2023-12-13
実験手法	X-RAY DIFFRACTION (2.7 Å)
主引用文献	Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins. Embo J., 26, 2007

2J1G

L-ficolin complexed to N-acetyl-cystein
分子名称:	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, CALCIUM ION, ...
著者	Garlatti, V, Gaboriaud, C.
登録日	2006-08-11
公開日	2007-01-23
最終更新日	2023-12-13
実験手法	X-RAY DIFFRACTION (1.95 Å)
主引用文献	Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins. Embo J., 26, 2007

2J3G

L-ficolin
分子名称:	CALCIUM ION, FICOLIN-2, O-ACETALDEHYDYL-HEXAETHYLENE GLYCOL, ...
著者	Garlatti, V, Gaboriaud, C.
登録日	2006-08-21
公開日	2007-01-23
最終更新日	2023-12-13
実験手法	X-RAY DIFFRACTION (2.5 Å)
主引用文献	Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins. Embo J., 26, 2007

2J3U

L-ficolin complexed to galactose
分子名称:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
著者	Garlatti, V, Gaboriaud, C.
登録日	2006-08-23
公開日	2007-01-23
最終更新日	2023-12-13
実験手法	X-RAY DIFFRACTION (2.15 Å)
主引用文献	Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins. Embo J., 26, 2007

2J0Y

L-ficolin complexed to b-1,3-D-glucan
分子名称:	2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, CALCIUM ION, ...
著者	Garlatti, V, Gaboriaud, C.
登録日	2006-08-08
公開日	2007-01-23
最終更新日	2020-07-29
実験手法	X-RAY DIFFRACTION (2.35 Å)
主引用文献	Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins. Embo J., 26, 2007

2J3O

L-ficolin complexed to N-acetyl-D-glucosamine
分子名称:	2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, CALCIUM ION, ...
著者	Garlatti, V, Gaboriaud, C.
登録日	2006-08-22
公開日	2007-01-23
最終更新日	2023-12-13
実験手法	X-RAY DIFFRACTION (2.65 Å)
主引用文献	Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins. Embo J., 26, 2007

2J0G

L-ficolin complexed to N-acetyl-mannosamine
分子名称:	2-acetamido-2-deoxy-alpha-D-mannopyranose, CALCIUM ION, FICOLIN-2, ...
著者	Garlatti, V, Gaboriaud, C.
登録日	2006-08-03
公開日	2007-01-23
最終更新日	2020-07-29
実験手法	X-RAY DIFFRACTION (2.85 Å)
主引用文献	Structural Insights Into the Innate Immune Recognition Specificities of L- and H-Ficolins. Embo J., 26, 2007

3VLE

Crystal structure of yeast proteasome interacting protein
分子名称:	DNA mismatch repair protein HSM3
著者	Takagi, K, Kim, S, Kato, K, Tanaka, K, Saeki, Y, Mizushima, T.
登録日	2011-12-01
公開日	2012-02-22
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (2.41 Å)
主引用文献	Structural basis for specific recognition of Rpt1, an ATPase subunit of the 26S proteasome, by a proteasome-dedicated chaperone Hsm3 J.Biol.Chem., 287, 2012

3VLD

Crystal structure of yeast proteasome interacting protein
分子名称:	DNA mismatch repair protein HSM3
著者	Takagi, K, Kim, S, Kato, K, Tanaka, K, Saeki, Y, Mizushima, T.
登録日	2011-12-01
公開日	2012-02-22
最終更新日	2012-04-18
実験手法	X-RAY DIFFRACTION (2.05 Å)
主引用文献	Structural basis for specific recognition of Rpt1, an ATPase subunit of the 26S proteasome, by a proteasome-dedicated chaperone Hsm3 J.Biol.Chem., 287, 2012

3VLF

Crystal structure of yeast proteasome interacting protein
分子名称:	26S protease regulatory subunit 7 homolog, DNA mismatch repair protein HSM3
著者	Takagi, K, Kim, S, Kato, K, Tanaka, K, Saeki, Y, Mizushima, T.
登録日	2011-12-01
公開日	2012-02-22
最終更新日	2023-12-06
実験手法	X-RAY DIFFRACTION (3.8 Å)
主引用文献	Structural basis for specific recognition of Rpt1, an ATPase subunit of the 26S proteasome, by a proteasome-dedicated chaperone Hsm3 J.Biol.Chem., 287, 2012

3VJT

Vitamin D receptor complex with a carborane compound
分子名称:	1-(2-[(R)-2,4-Dihydroxybutoxy]ethyl)-12-(5-ethyl-5-hydroxyheptyl)-1,12-dicarba-closo-dodecaborane, Vitamin D3 receptor, peptide from Mediator of RNA polymerase II transcription subunit 1
著者	Fujii, S, Masuno, M, Kagechika, H, Nakabayashi, M, Ito, N.
登録日	2011-10-31
公開日	2012-02-08
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (2 Å)
主引用文献	Boron Cluster-based Development of Potent Nonsecosteroidal Vitamin D Receptor Ligands: Direct Observation of Hydrophobic Interaction between Protein Surface and Carborane J.Am.Chem.Soc., 133, 2011

3VJS

Vitamin D receptor complex with a carborane compound
分子名称:	1-(2-[(S)-2,4-Dihydroxybutoxy]ethyl)-12-(5-ethyl-5-hydroxyheptyl)-1,12-dicarba-closo-dodecaborane, Vitamin D3 receptor, peptide from Mediator of RNA polymerase II transcription subunit 1
著者	Fujii, S, Masuno, M, Kagechika, H, Nakabayashi, M, Ito, N.
登録日	2011-10-31
公開日	2012-02-08
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (1.93 Å)
主引用文献	Boron Cluster-based Development of Potent Nonsecosteroidal Vitamin D Receptor Ligands: Direct Observation of Hydrophobic Interaction between Protein Surface and Carborane J.Am.Chem.Soc., 133, 2011

6J5L

Crystal structure of Trk-A in complex with the Pan-Trk Kinase Inhibitor, compound 10e
分子名称:	High affinity nerve growth factor receptor, N-{2-[({3-[6-(piperazin-1-yl)pyridin-3-yl]-1H-indazol-5-yl}amino)methyl]phenyl}methanesulfonamide
著者	Kensuke, A, Kazutaka, I.
登録日	2019-01-11
公開日	2019-07-17
最終更新日	2023-11-22
実験手法	X-RAY DIFFRACTION (2.3 Å)
主引用文献	The discovery of novel 3-aryl-indazole derivatives as peripherally restricted pan-Trk inhibitors for the treatment of pain. Bioorg.Med.Chem.Lett., 29, 2019

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