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3BP2
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BU of 3bp2 by Molmil
ROLE OF THE N-TERMINUS IN THE INTERACTION OF PANCREATIC PHOSPHOLIPASE A2 WITH AGGREGATED SUBSTRATES. PROPERTIES AND CRYSTAL STRUCTURE OF TRANSAMINATED PHOSPHOLIPASE A2
分子名称: CALCIUM ION, PHOSPHOLIPASE A2
著者Dijkstra, B.W, Drenth, J.
登録日1983-06-27
公開日1983-09-15
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Role of the N-terminus in the interaction of pancreatic phospholipase A2 with aggregated substrates. Properties and crystal structure of transaminated phospholipase A2
Biochemistry, 23, 1984
2BP2
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THE STRUCTURE OF BOVINE PANCREATIC PROPHOSPHOLIPASE A2 AT 3.0 ANGSTROMS RESOLUTION
分子名称: PHOSPHOLIPASE A2
著者Dijkstra, B.W, Vannes, G.J.H, Kalk, K.H, Brandenburg, N.P, Hol, W.G.J, Drenth, J.
登録日1981-06-05
公開日1981-07-16
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The Structure of Bovine Pancreatic Prophospholipase A2 at 3.0 Angstroms Resolution
Acta Crystallogr.,Sect.B, 38, 1982
1BP2
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STRUCTURE OF BOVINE PANCREATIC PHOSPHOLIPASE A2 AT 1.7 ANGSTROMS RESOLUTION
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, PHOSPHOLIPASE A2
著者Dijkstra, B.W, Kalk, K.H, Hol, W.G.J, Drenth, J.
登録日1981-04-06
公開日1981-05-21
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of bovine pancreatic phospholipase A2 at 1.7A resolution.
J.Mol.Biol., 147, 1981
1P2P
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STRUCTURE OF PORCINE PANCREATIC PHOSPHOLIPASE A2 AT 2.6 ANGSTROMS RESOLUTION AND COMPARISON WITH BOVINE PHOSPHOLIPASE A2
分子名称: CALCIUM ION, PHOSPHOLIPASE A2
著者Dijkstra, B.W, Renetseder, R, Kalk, K.H, Hol, W.G.J, Drenth, J.
登録日1983-06-27
公開日1983-09-15
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of porcine pancreatic phospholipase A2 at 2.6 A resolution and comparison with bovine phospholipase A2.
J.Mol.Biol., 168, 1983
5P2P
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X-RAY STRUCTURE OF PHOSPHOLIPASE A2 COMPLEXED WITH A SUBSTRATE-DERIVED INHIBITOR
分子名称: CALCIUM ION, PHOSPHOLIPASE A2, PHOSPHONIC ACID 2-DODECANOYLAMINO-HEXYL ESTER PROPYL ESTER
著者Dijkstra, B.W, Thunnissen, M.M.G.M, Kalk, K.H, Drenth, J.
登録日1990-09-01
公開日1991-10-15
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献X-ray structure of phospholipase A2 complexed with a substrate-derived inhibitor.
Nature, 347, 1990
3P2P
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ENHANCED ACTIVITY AND ALTERED SPECIFICITY OF PHOSPHOLIPASE A2 BY DELETION OF A SURFACE LOOP
分子名称: CALCIUM ION, PHOSPHOLIPASE A2
著者Dijkstra, B.W, Thunnissen, M.M.G.M, Kalk, K.H, Drenth, J.
登録日1989-11-29
公開日1990-01-15
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Enhanced activity and altered specificity of phospholipase A2 by deletion of a surface loop.
Science, 244, 1989
2PHI
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A LARGE CONFORMATIONAL CHANGE IS FOUND IN THE CRYSTAL STRUCTURE OF THE PORCINE PANCREATIC PHOSPHOLIPASE A2 POINT MUTANT F63V
分子名称: CALCIUM ION, PHOSPHOLIPASE A2
著者Dijkstra, B.W, Thunnissen, M.M.G.M, Kalk, K.H, Drenth, J.
登録日1993-04-08
公開日1993-07-15
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of a porcine pancreatic phospholipase A2 mutant. A large conformational change caused by the F63V point mutation.
J.Mol.Biol., 232, 1993
3JUR
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The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima
分子名称: Exo-poly-alpha-D-galacturonosidase
著者Pijning, T, van Pouderoyen, G, Kluskens, L.D, van der Oost, J, Dijkstra, B.W.
登録日2009-09-15
公開日2009-11-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献The crystal structure of a hyperthermoactive exopolygalacturonase from Thermotoga maritima reveals a unique tetramer
Febs Lett., 2009
4LIP
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BU of 4lip by Molmil
PSEUDOMONAS LIPASE COMPLEXED WITH RC-(RP, SP)-DIBUTYLCARBAMOYLGLYCERO-3-O-BUTYLPHOSPHONATE
分子名称: BUTYLPHOSPHONATE, CALCIUM ION, TRIACYL-GLYCEROL-HYDROLASE
著者Lang, D.A, Dijkstra, B.W.
登録日1997-08-18
公開日1998-08-19
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural basis of the chiral selectivity of Pseudomonas cepacia lipase
Eur.J.Biochem., 254, 1998
2DIJ
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BU of 2dij by Molmil
COMPLEX OF A Y195F MUTANT CGTASE FROM B. CIRCULANS STRAIN 251 COMPLEXED WITH A MALTONONAOSE INHIBITOR AT PH 9.8 OBTAINED AFTER SOAKING THE CRYSTAL WITH ACARBOSE AND MALTOHEXAOSE
分子名称: 1-AMINO-2,3-DIHYDROXY-5-HYDROXYMETHYL CYCLOHEX-5-ENE, CALCIUM ION, CYCLODEXTRIN GLYCOSYLTRANSFERASE, ...
著者Strokopytov, B.V, Knegtel, R.M.A, Uitdehaag, J.C.M, Dijkstra, B.W.
登録日1998-05-27
公開日1998-12-09
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of cyclodextrin glycosyltransferase complexed with a maltononaose inhibitor at 2.6 angstrom resolution. Implications for product specificity.
Biochemistry, 35, 1996
4V2R
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Ironing out their differences: Dissecting the structural determinants of a phenylalanine aminomutase and ammonia lyase
分子名称: PHENYLALANINE AMINOMUTASE (L-BETA-PHENYLALANINE FORMING)
著者Heberling, M, Masman, M, Bartsch, S, Wybenga, G.G, Dijkstra, B.W, Marrink, S, Janssen, D.
登録日2014-10-14
公開日2014-12-10
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Ironing out their differences: dissecting the structural determinants of a phenylalanine aminomutase and ammonia lyase.
ACS Chem. Biol., 10, 2015
4CVB
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BU of 4cvb by Molmil
Crystal structure of quinone-dependent alcohol dehydrogenase from Pseudogluconobacter saccharoketogenenes
分子名称: ALCOHOL DEHYDROGENASE, CALCIUM ION, CHLORIDE ION, ...
著者Rozeboom, H.J, Yu, S, Mikkelsen, R, Nikolaev, I, Mulder, H, Dijkstra, B.W.
登録日2014-03-25
公開日2015-03-25
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Crystal Structure of Quinone-Dependent Alcohol Dehydrogenase from Pseudogluconobacter Saccharoketogenes. A Versatile Dehydrogenase Oxidizing Alcohols and Carbohydrates.
Protein Sci., 24, 2015
4CVC
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BU of 4cvc by Molmil
Crystal structure of quinone-dependent alcohol dehydrogenase from Pseudogluconobacter saccharoketogenenes with zinc in the active site
分子名称: ALCOHOL DEHYDROGENASE, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Rozeboom, H.J, Yu, S, Mikkelsen, R, Nikolaev, I, Mulder, H, Dijkstra, B.W.
登録日2014-03-25
公開日2015-03-25
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Crystal Structure of Quinone-Dependent Alcohol Dehydrogenase from Pseudogluconobacter Saccharoketogenes. A Versatile Dehydrogenase Oxidizing Alcohols and Carbohydrates.
Protein Sci., 24, 2015
4V2Q
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BU of 4v2q by Molmil
Ironing out their differences: Dissecting the structural determinants of a phenylalanine aminomutase and ammonia lyase
分子名称: PHENYLALANINE AMMONIA-LYASE
著者Heberling, M, Masman, M, Bartsch, S, Wybenga, G.G, Dijkstra, B.W, Marrink, S, Janssen, D.
登録日2014-10-14
公開日2014-12-10
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Ironing Out Their Differences: Dissecting the Structural Determinants of a Phenylalanine Aminomutase and Ammonia Lyase.
Acs Chem.Biol., 10, 2015
2PJJ
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E. coli lytic transglycosylase MltA-D308A in apo-1 form
分子名称: Membrane-bound lytic murein transglycosylase A
著者van Straaten, K.E, Dijkstra, B.W, Thunnissen, A.M.W.H.
登録日2007-04-16
公開日2007-05-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Structure of Escherichia coli Lytic transglycosylase MltA with bound chitohexaose: implications for peptidoglycan binding and cleavage
J.Biol.Chem., 282, 2007
3BMV
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Cyclodextrin glycosyl transferase from Thermoanerobacterium thermosulfurigenes EM1 mutant S77P
分子名称: CALCIUM ION, Cyclomaltodextrin glucanotransferase, GLYCEROL, ...
著者Rozeboom, H.J, van Oosterwijk, N, Dijkstra, B.W.
登録日2007-12-13
公開日2008-05-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Elimination of competing hydrolysis and coupling side reactions of a cyclodextrin glucanotransferase by directed evolution.
Biochem.J., 413, 2008
3BMW
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Cyclodextrin glycosyl transferase from Thermoanerobacterium thermosulfurigenes EM1 mutant S77P complexed with a maltoheptaose inhibitor
分子名称: 6-AMINO-4-HYDROXYMETHYL-CYCLOHEX-4-ENE-1,2,3-TRIOL, CALCIUM ION, CHLORIDE ION, ...
著者Rozeboom, H.J, van Oosterwijk, N, Dijkstra, B.W.
登録日2007-12-13
公開日2008-05-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Elimination of competing hydrolysis and coupling side reactions of a cyclodextrin glucanotransferase by directed evolution.
Biochem.J., 413, 2008
2PI8
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Crystal structure of E. coli MltA with bound chitohexaose
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Membrane-bound lytic murein transglycosylase A, PHOSPHATE ION
著者van Straaten, K.E, Barends, T.R.M, Dijkstra, B.W, Thunnissen, A.M.W.H.
登録日2007-04-13
公開日2007-05-08
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure of Escherichia coli Lytic transglycosylase MltA with bound chitohexaose: implications for peptidoglycan binding and cleavage
J.Biol.Chem., 282, 2007
2PIC
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E. coli lytic transglycosylase MltA-D308A in apo-2 form
分子名称: Membrane-bound lytic murein transglycosylase A
著者van Straaten, K.E, Dijkstra, B.W, Thunnissen, A.M.W.H.
登録日2007-04-13
公開日2007-05-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structure of Escherichia coli Lytic transglycosylase MltA with bound chitohexaose: implications for peptidoglycan binding and cleavage
J.Biol.Chem., 282, 2007
1B6G
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HALOALKANE DEHALOGENASE AT PH 5.0 CONTAINING CHLORIDE
分子名称: CHLORIDE ION, GLYCEROL, HALOALKANE DEHALOGENASE, ...
著者Ridder, I.S, Rozeboom, H.J, Dijkstra, B.W.
登録日1999-01-14
公開日1999-07-13
最終更新日2024-12-25
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Haloalkane dehalogenase from Xanthobacter autotrophicus GJ10 refined at 1.15 A resolution.
Acta Crystallogr.,Sect.D, 55, 1999
8BBX
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Structure of prolyl endoprotease from Aspergillus niger CBS 109712 in space group C222(1)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Endoprotease endo-Pro, TETRAETHYLENE GLYCOL, ...
著者Pijning, T, Vujicic-Zagar, A, Van der Laan, J.M, De Jong, R.M, Dijkstra, B.W.
登録日2022-10-14
公開日2023-12-20
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and time-resolved mechanistic investigations of protein hydrolysis by the acidic proline-specific endoprotease from Aspergillus niger.
Protein Sci., 33, 2024
8B57
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Structure of prolyl endoprotease from Aspergillus niger CBS 109712
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
著者Pijning, T, Vujicic-Zagar, A, Van der Laan, J.M, De Jong, R.M, Dijkstra, B.W.
登録日2022-09-22
公開日2023-12-20
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Structural and time-resolved mechanistic investigations of protein hydrolysis by the acidic proline-specific endoprotease from Aspergillus niger.
Protein Sci., 33, 2024
5Z5H
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Crystal structure of a thermostable glycoside hydrolase family 43 {beta}-1,4-xylosidase from Geobacillus thermoleovorans IT-08 in complex with D-xylose
分子名称: Beta-xylosidase, CALCIUM ION, alpha-D-xylopyranose
著者Rohman, A, van Oosterwijk, N, Puspaningsih, N.N.T, Dijkstra, B.W.
登録日2018-01-18
公開日2018-04-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis of product inhibition by arabinose and xylose of the thermostable GH43 beta-1,4-xylosidase from Geobacillus thermoleovorans IT-08.
PLoS ONE, 13, 2018
5Z5I
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Crystal structure of a thermostable glycoside hydrolase family 43 {beta}-1,4-xylosidase from Geobacillus thermoleovorans IT-08 in complex with L-arabinose and D-xylose
分子名称: Beta-xylosidase, CALCIUM ION, alpha-D-xylopyranose, ...
著者Rohman, A, van Oosterwijk, N, Puspaningsih, N.N.T, Dijkstra, B.W.
登録日2018-01-18
公開日2018-04-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis of product inhibition by arabinose and xylose of the thermostable GH43 beta-1,4-xylosidase from Geobacillus thermoleovorans IT-08.
PLoS ONE, 13, 2018
5Z5D
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Crystal structure of a thermostable glycoside hydrolase family 43 {beta}-1,4-xylosidase from Geobacillus thermoleovorans IT-08
分子名称: Beta-xylosidase, CALCIUM ION, GLYCEROL
著者Rohman, A, van Oosterwijk, N, Puspaningsih, N.N.T, Dijkstra, B.W.
登録日2018-01-17
公開日2018-04-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis of product inhibition by arabinose and xylose of the thermostable GH43 beta-1,4-xylosidase from Geobacillus thermoleovorans IT-08.
PLoS ONE, 13, 2018

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