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9J4Y
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BU of 9j4y by Molmil
Crystal Structure of the L322F mutant of Omega Transaminase TA_2799 from Pseudomonas putida KT2440
分子名称: 1,2-ETHANEDIOL, Aminotransferase, class III, ...
著者Das, P, Bhaumik, P.
登録日2024-08-10
公開日2025-06-04
最終更新日2025-06-11
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural insights and rational design of Pseudomonas putida KT2440 Omega transaminases for enhanced biotransformation of (R)-PAC to (1R, 2S)-Norephedrine.
J.Biol.Chem., 2025
9J4Z
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BU of 9j4z by Molmil
Crystal structure of the open state of omega transaminase TA_5182 from Pseudomonas putida KT2440
分子名称: Polyamine:pyruvate transaminase, SULFATE ION
著者Das, P, Bhaumik, P.
登録日2024-08-10
公開日2025-06-04
最終更新日2025-06-11
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structural insights and rational design of Pseudomonas putida KT2440 Omega transaminases for enhanced biotransformation of (R)-PAC to (1R, 2S)-Norephedrine.
J.Biol.Chem., 2025
9J50
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BU of 9j50 by Molmil
Crystal structure of the closed state of the omega transaminase TA_5182 from Pseudomonas putida KT2440
分子名称: 1,2-ETHANEDIOL, PHOSPHATE ION, Polyamine:pyruvate transaminase
著者Das, P, Bhaumik, P.
登録日2024-08-10
公開日2025-06-04
最終更新日2025-06-11
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights and rational design of Pseudomonas putida KT2440 Omega transaminases for enhanced biotransformation of (R)-PAC to (1R, 2S)-Norephedrine.
J.Biol.Chem., 2025
9J2K
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BU of 9j2k by Molmil
Crystal structure of Omega Transaminase TA_2799 from Pseudomonas putida KT2440
分子名称: 1,2-ETHANEDIOL, Aminotransferase, class III, ...
著者Das, P, Bhaumik, P.
登録日2024-08-07
公開日2025-06-04
最終更新日2025-06-11
実験手法X-RAY DIFFRACTION (1.76 Å)
主引用文献Structural insights and rational design of Pseudomonas putida KT2440 Omega transaminases for enhanced biotransformation of (R)-PAC to (1R, 2S)-Norephedrine.
J.Biol.Chem., 2025
7DFY
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BU of 7dfy by Molmil
Novel motif for left-handed G-quadruplex formation
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2xMotif2, POTASSIUM ION, ...
著者Das, P, Winnerdy, F.R, Maity, A, Mechulam, Y, Phan, A.T.
登録日2020-11-10
公開日2021-09-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献A novel minimal motif for left-handed G-quadruplex formation.
Chem.Commun.(Camb.), 57, 2021
7D5D
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BU of 7d5d by Molmil
Left-handed G-quadruplex containing one bulge
分子名称: 1xBulge-LHG4motif, POTASSIUM ION, SPERMINE
著者Das, P, Ngo, K.H, Winnerdy, F.R, Maity, A, Bakalar, B, Mechulam, Y, Schmitt, E, Phan, A.T.
登録日2020-09-25
公開日2021-02-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Bulges in left-handed G-quadruplexes.
Nucleic Acids Res., 49, 2021
7D5E
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BU of 7d5e by Molmil
Left-handed G-quadruplex containing two bulges
分子名称: 2xBulge-LHG4motif, POTASSIUM ION, SODIUM ION, ...
著者Das, P, Maity, A, Ngo, K.H, Winnerdy, F.R, Bakalar, B, Mechulam, Y, Schmitt, E, Phan, A.T.
登録日2020-09-25
公開日2021-02-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.296 Å)
主引用文献Bulges in left-handed G-quadruplexes.
Nucleic Acids Res., 49, 2021
7XTF
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BU of 7xtf by Molmil
Crystal Structure of PL-5 family polysaccharide lyase PanPL-Y226F mutant from Pandoraea apista in apo form at pH5.5
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Poly(Beta-D-mannuronate) lyase
著者Dash, P, Acharya, R.
登録日2022-05-17
公開日2022-08-10
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Distinct Modes of Hidden Structural Dynamics in the Functioning of an Allosteric Polysaccharide Lyase.
Acs Cent.Sci., 8, 2022
7XTE
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Crystal Structure of PL-5 family polysaccharide lyase PanPL-N171L mutant from Pandoraea apista in apo form at pH3.5
分子名称: Poly(Beta-D-mannuronate) lyase
著者Dash, P, Acharya, R.
登録日2022-05-17
公開日2022-08-10
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Distinct Modes of Hidden Structural Dynamics in the Functioning of an Allosteric Polysaccharide Lyase.
Acs Cent.Sci., 8, 2022
7WXM
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BU of 7wxm by Molmil
Crystal Structure of PL-5 family polysaccharide lyase PanPL from Pandoraea apista at pH6.5 in apo form
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, poly(beta-D-mannuronate) lyase
著者Dash, P, Acharya, R.
登録日2022-02-15
公開日2022-08-10
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献Distinct Modes of Hidden Structural Dynamics in the Functioning of an Allosteric Polysaccharide Lyase.
Acs Cent.Sci., 8, 2022
7WXR
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BU of 7wxr by Molmil
Crystal Structure of PL-5 family polysaccharide lyase PanPL-N171L mutant from Pandoraea apista in apo form
分子名称: poly(beta-D-mannuronate) lyase
著者Dash, P, Acharya, R.
登録日2022-02-15
公開日2022-08-10
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Distinct Modes of Hidden Structural Dynamics in the Functioning of an Allosteric Polysaccharide Lyase.
Acs Cent.Sci., 8, 2022
7WXN
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BU of 7wxn by Molmil
Crystal Structure of PL-5 family polysaccharide lyase PanPL from Pandoraea apista at pH7.5 in apo form
分子名称: poly(beta-D-mannuronate) lyase
著者Dash, P, Acharya, R.
登録日2022-02-15
公開日2022-08-10
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Distinct Modes of Hidden Structural Dynamics in the Functioning of an Allosteric Polysaccharide Lyase.
Acs Cent.Sci., 8, 2022
7WXP
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BU of 7wxp by Molmil
Crystal Structure of PL-5 family polysaccharide lyase PanPL-H172A mutant from Pandoraea apista in ManA bound form
分子名称: beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid, poly(beta-D-mannuronate) lyase
著者Dash, P, Acharya, R.
登録日2022-02-15
公開日2022-08-10
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Distinct Modes of Hidden Structural Dynamics in the Functioning of an Allosteric Polysaccharide Lyase.
Acs Cent.Sci., 8, 2022
7WXL
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BU of 7wxl by Molmil
Crystal Structure of PL-5 family polysaccharide lyase PanPL from Pandoraea apista at pH5.5 in apo form
分子名称: CHLORIDE ION, poly(beta-D-mannuronate) lyase
著者Dash, P, Acharya, R.
登録日2022-02-15
公開日2022-08-10
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Distinct Modes of Hidden Structural Dynamics in the Functioning of an Allosteric Polysaccharide Lyase.
Acs Cent.Sci., 8, 2022
7WXO
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BU of 7wxo by Molmil
Crystal Structure of PL-5 family polysaccharide lyase PanPL from Pandoraea apista at pH8.5 in apo form
分子名称: poly(beta-D-mannuronate) lyase
著者Dash, P, Acharya, R.
登録日2022-02-15
公開日2022-08-10
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Distinct Modes of Hidden Structural Dynamics in the Functioning of an Allosteric Polysaccharide Lyase.
Acs Cent.Sci., 8, 2022
7WXQ
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BU of 7wxq by Molmil
Crystal Structure of PL-5 family polysaccharide lyase PanPL-H172A mutant from Pandoraea apista in apo form
分子名称: CHLORIDE ION, poly(beta-D-mannuronate) lyase
著者Dash, P, Acharya, R.
登録日2022-02-15
公開日2022-08-10
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Distinct Modes of Hidden Structural Dynamics in the Functioning of an Allosteric Polysaccharide Lyase.
Acs Cent.Sci., 8, 2022
7WXK
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BU of 7wxk by Molmil
Crystal Structure of PL-5 family polysaccharide lyase PanPL from Pandoraea apista at pH4.5 in apo form
分子名称: poly(beta-D-mannuronate) lyase
著者Dash, P, Acharya, R.
登録日2022-02-15
公開日2022-08-10
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Distinct Modes of Hidden Structural Dynamics in the Functioning of an Allosteric Polysaccharide Lyase.
Acs Cent.Sci., 8, 2022
7WXJ
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BU of 7wxj by Molmil
Crystal Structure of PL-5 family polysaccharide lyase PanPL from Pandoraea apista at pH3.5 in apo form
分子名称: poly(beta-D-mannuronate) lyase
著者Dash, P, Acharya, R.
登録日2022-02-15
公開日2022-08-10
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Distinct Modes of Hidden Structural Dynamics in the Functioning of an Allosteric Polysaccharide Lyase.
Acs Cent.Sci., 8, 2022
5Z19
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BU of 5z19 by Molmil
The crystal structure of Ruminococcus gnavus beta-glucuronidase in complex with uronic isofagomine
分子名称: (3S,4R,5R)-4,5-dihydroxypiperidine-3-carboxylic acid, Beta-glucuronidase
著者Dashnyam, P, Lin, H.Y, Lin, C.H.
登録日2017-12-25
公開日2018-12-12
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.503 Å)
主引用文献Dissection of the substrate preference and structure of gut microbial beta-glucuronidases identifies the major bacteria causing xenobiotic toxicity
To Be Published
5Z1A
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BU of 5z1a by Molmil
The crystal structure of Bacteroides fragilis beta-glucuronidase in complex with uronic isofagomine
分子名称: (3S,4R,5R)-4,5-dihydroxypiperidine-3-carboxylic acid, Putative beta-galactosidase
著者Dashnyam, P, Lin, H.Y, Lin, C.H.
登録日2017-12-25
公開日2018-12-12
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.859 Å)
主引用文献Dissection of the substrate preference and structure of gut microbial-glucuronidases identifies the major bacteria causing xenobiotic toxicity
To Be Published
5Z18
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BU of 5z18 by Molmil
The crystal structure of Ruminococcus gnavus beta-glucuronidase
分子名称: Beta-glucuronidase
著者Dashnyam, P, Lin, H.Y, Lin, C.H.
登録日2017-12-25
公開日2018-12-12
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.495 Å)
主引用文献Dissection of the substrate preference and structure of gut microbial beta-glucuronidases identifies the major bacteria causing xenobiotic toxicity
To Be Published
5Z1B
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BU of 5z1b by Molmil
Structure of Bifidobacterium dentium beta-glucuronidase complexed with coumarin-3-O-glucuronide
分子名称: 3-HYDROXY-2H-CHROMEN-2-ONE, Glycosyl hydrolase family 2, TIM barrel domain protein, ...
著者Dashnyam, P, Lin, H.Y, Lin, C.H.
登録日2017-12-25
公開日2018-12-12
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Dissection of the substrate preference and structure of gut microbial-glucuronidases identifies the major bacteria causing xenobiotic toxicity
To Be Published
6JZ2
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BU of 6jz2 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with uronic isofagomine at 1.3 Angstroms resolution
分子名称: (3S,4R,5R)-4,5-dihydroxypiperidine-3-carboxylic acid, (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, ...
著者Dashnyam, P, Lin, H.Y.
登録日2019-04-30
公開日2020-06-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
6JZ4
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BU of 6jz4 by Molmil
b-glucuronidase from Ruminococcus gnavus in complex with D-glucaro-d-lactam
分子名称: (2S,3R,4S,5R)-3,4,5-trihydroxy-6-oxopiperidine-2-carboxylic acid, (4R)-2-METHYLPENTANE-2,4-DIOL, Beta-glucuronidase
著者Dashnyam, P, Lin, H.Y.
登録日2019-04-30
公開日2020-06-03
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.712 Å)
主引用文献Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020
6JZ1
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BU of 6jz1 by Molmil
Apo structure of b-glucuronidase from Ruminococcus gnavus at 1.7 Angstrom resolution
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, Beta-glucuronidase
著者Dashnyam, P, Lin, H.Y.
登録日2019-04-30
公開日2020-06-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Substituent Position of Iminocyclitols Determines the Potency and Selectivity for Gut Microbial Xenobiotic-Reactivating Enzymes.
J.Med.Chem., 63, 2020

 

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