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2XOM
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BU of 2xom by Molmil
Atomic resolution structure of TmCBM61 in complex with beta-1,4- galactotriose
分子名称: ARABINOGALACTAN ENDO-1,4-BETA-GALACTOSIDASE, CALCIUM ION, beta-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-galactopyranose
著者Cid, M, Lodberg-Pedersen, H, Kaneko, S, Coutinho, P.M, Henrissat, B, Willats, W.G.T, Boraston, A.B.
登録日2010-08-20
公開日2010-09-08
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献Recognition of the Helical Structure of Beta-1,4-Galactan by a New Family of Carbohydrate-Binding Modules.
J.Biol.Chem., 285, 2010
2XON
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BU of 2xon by Molmil
Structure of TmCBM61 in complex with beta-1,4-galactotriose at 1.4 A resolution
分子名称: 1,2-ETHANEDIOL, ARABINOGALACTAN ENDO-1,4-BETA-GALACTOSIDASE, CALCIUM ION, ...
著者Cid, M, Lodberg-Pedersen, H, Kaneko, S, Coutinho, P.M, Henrissat, B, Willats, W.G.T, Boraston, A.B.
登録日2010-08-20
公開日2010-09-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Recognition of the Helical Structure of Beta-1,4-Galactan by a New Family of Carbohydrate-Binding Modules.
J.Biol.Chem., 285, 2010
6YSZ
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BU of 6ysz by Molmil
Cryo-EM structure of T7 bacteriophage DNA translocation gp15 core protein intermediate assembly
分子名称: Internal virion protein gp15
著者Perez-Ruiz, M, Pulido-Cid, M, Luque-Ortega, J.R, Cuervo, A, Carrascosa, J.L.
登録日2020-04-23
公開日2021-09-08
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Assisted assembly of bacteriophage T7 core components for genome translocation across the bacterial envelope.
Proc.Natl.Acad.Sci.USA, 118, 2021
6YT5
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BU of 6yt5 by Molmil
Cryo-EM structure of T7 bacteriophage DNA translocation gp15-gp16 core complex intermediate assembly
分子名称: Internal virion protein gp15, Peptidoglycan transglycosylase gp16
著者Perez-Ruiz, M, Pulido-Cid, M, Luque-Ortega, J.R, Cuervo, A, Carrascosa, J.L.
登録日2020-04-23
公開日2021-09-08
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Assisted assembly of bacteriophage T7 core components for genome translocation across the bacterial envelope.
Proc.Natl.Acad.Sci.USA, 118, 2021
3J4A
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BU of 3j4a by Molmil
Structure of gp8 connector protein
分子名称: Head-to-tail joining protein
著者Cuervo, A, Pulido-Cid, M, Chagoyen, M, Arranz, R, Gonzalez-Garcia, V.A, Garcia-Doval, C, Caston, J.R, Valpuesta, J.M, van Raaij, M.J, Martin-Benito, J, Carrascosa, J.L.
登録日2013-07-09
公開日2013-08-07
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献Structural characterization of the bacteriophage t7 tail machinery.
J.Biol.Chem., 288, 2013
3J4B
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BU of 3j4b by Molmil
Structure of T7 gatekeeper protein (gp11)
分子名称: Tail tubular protein A
著者Cuervo, A, Pulido-Cid, M, Chagoyen, M, Arranz, R, Gonzalez-Garcia, V.A, Garcia-Doval, C, Caston, J.R, Valpuesta, J.M, van Raaij, M.J, Martin-Benito, J, Carrascosa, J.L.
登録日2013-07-09
公開日2013-08-07
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献Structural characterization of the bacteriophage t7 tail machinery.
J.Biol.Chem., 288, 2013
4BIJ
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Threading model of T7 large terminase
分子名称: DNA MATURASE B
著者Dauden, M.I, Martin-Benito, J, Sanchez-Ferrero, J.C, Pulido-Cid, M, Valpuesta, J.M, Carrascosa, J.L.
登録日2013-04-10
公開日2013-05-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (16 Å)
主引用文献Large Terminase Conformational Change Induced by Connector Binding in Bacteriophage T7
J.Biol.Chem., 288, 2013
4BIL
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BU of 4bil by Molmil
Threading model of the T7 large terminase within the gp8gp19 complex
分子名称: DNA MATURASE B
著者Dauden, M.I, Martin-Benito, J, Sanchez-Ferrero, J.C, Pulido-Cid, M, Valpuesta, J.M, Carrascosa, J.L.
登録日2013-04-10
公開日2013-05-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (29 Å)
主引用文献Large Terminase Conformational Change Induced by Connector Binding in Bacteriophage T7
J.Biol.Chem., 288, 2013
4A6O
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BU of 4a6o by Molmil
CpGH89CBM32-4, produced by Clostridium perfringens, in complex with glcNAc-alpha-1,4-galactose
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-beta-D-galactopyranose, ALPHA-N-ACETYLGLUCOSAMINIDASE FAMILY PROTEIN, CALCIUM ION
著者Ficko-Blean, E, Stuart, C.P, Suits, M.D, Cid, M, Tessier, M, Woods, R.J, Boraston, A.B.
登録日2011-11-07
公開日2012-04-04
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Carbohydrate Recognition by an Architecturally Complex Alpha-N-Acetylglucosaminidase from Clostridium Perfringens.
Plos One, 7, 2012
4A3Z
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CpGH89CBM32-4 (seleno-methionine labeled) produced by Clostridium perfringens
分子名称: ALPHA-N-ACETYLGLUCOSAMINIDASE FAMILY PROTEIN, CALCIUM ION
著者Ficko-Blean, E, Stuart, C.P, Suits, M.D, Cid, M, Tessier, M, Woods, R.J, Boraston, A.B.
登録日2011-10-06
公開日2012-04-04
最終更新日2012-04-18
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Carbohydrate Recognition by an Architecturally Complex Alpha-N-Acetylglucosaminidase from Clostridium Perfringens.
Plos One, 7, 2012
4A45
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CpGH89CBM32-5, from Clostridium perfringens, in complex with GalNAc- beta-1,3-galactose
分子名称: 2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-beta-D-galactopyranose, ALPHA-N-ACETYLGLUCOSAMINIDASE FAMILY PROTEIN, CALCIUM ION, ...
著者Ficko-Blean, E, Stuart, C.P, Suits, M.D, Cid, M, Tessier, M, Woods, R.J, Boraston, A.B.
登録日2011-10-06
公開日2012-04-04
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Carbohydrate Recognition by an Architecturally Complex Alpha-N-Acetylglucosaminidase from Clostridium Perfringens.
Plos One, 7, 2012
4A41
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CpGH89CBM32-5, from Clostridium perfringens, in complex with galactose
分子名称: ALPHA-N-ACETYLGLUCOSAMINIDASE FAMILY PROTEIN, CALCIUM ION, SODIUM ION, ...
著者Ficko-Blean, E, Stuart, C.P, Suits, M.D, Cid, M, Tessier, M, Woods, R.J, Boraston, A.B.
登録日2011-10-06
公開日2012-04-04
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Carbohydrate Recognition by an Architecturally Complex Alpha-N-Acetylglucosaminidase from Clostridium Perfringens.
Plos One, 7, 2012
4A44
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CpGH89CBM32-5, from Clostridium perfringens, in complex with the Tn Antigen
分子名称: 2-acetamido-2-deoxy-alpha-D-galactopyranose, Alpha-N-acetylglucosaminidase, CALCIUM ION, ...
著者Ficko-Blean, E, Stuart, C.P, Suits, M.D, Cid, M, Tessier, M, Woods, R.J, Boraston, A.B.
登録日2011-10-06
公開日2012-04-04
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Carbohydrate Recognition by an Architecturally Complex Alpha-N-Acetylglucosaminidase from Clostridium Perfringens.
Plos One, 7, 2012
4AAX
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CpGH89CBM32-5, from Clostridium perfringens, in complex with N- acetylgalactosamine
分子名称: 2-acetamido-2-deoxy-beta-D-galactopyranose, ALPHA-N-ACETYLGLUCOSAMINIDASE, CALCIUM ION, ...
著者Ficko-Blean, E, Stuart, C.P, Suits, M.D, Cid, M, Tessier, M, Woods, R.J, Boraston, A.B.
登録日2011-12-05
公開日2012-04-04
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Carbohydrate Recognition by an Architecturally Complex Alpha-N-Acetylglucosaminidase from Clostridium Perfringens.
Plos One, 7, 2012
4A42
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CpGH89CBM32-6 produced by Clostridium perfringens
分子名称: ALPHA-N-ACETYLGLUCOSAMINIDASE FAMILY PROTEIN, CALCIUM ION
著者Ficko-Blean, E, Stuart, C.P, Suits, M.D, Cid, M, Tessier, M, Woods, R.J, Boraston, A.B.
登録日2011-10-06
公開日2012-04-04
最終更新日2012-04-18
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Carbohydrate Recognition by an Architecturally Complex Alpha-N-Acetylglucosaminidase from Clostridium Perfringens.
Plos One, 7, 2012
7Z38
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BU of 7z38 by Molmil
Structure of the RAF1-HSP90-CDC37 complex (RHC-I)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Heat shock protein HSP 90-beta, Hsp90 co-chaperone Cdc37, ...
著者Mesa, P, Garcia-Alonso, S, Barbacid, M, Montoya, G.
登録日2022-03-01
公開日2022-09-14
最終更新日2022-09-28
実験手法ELECTRON MICROSCOPY (3.16 Å)
主引用文献Structure of the RAF1-HSP90-CDC37 complex reveals the basis of RAF1 regulation.
Mol.Cell, 82, 2022
7Z37
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Structure of the RAF1-HSP90-CDC37 complex (RHC-II)
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Heat shock protein HSP 90-beta, Hsp90 co-chaperone Cdc37, ...
著者Mesa, P, Garcia-Alonso, S, Barbacid, M, Montoya, G.
登録日2022-03-01
公開日2022-09-14
最終更新日2022-09-28
実験手法ELECTRON MICROSCOPY (3.67 Å)
主引用文献Structure of the RAF1-HSP90-CDC37 complex reveals the basis of RAF1 regulation.
Mol.Cell, 82, 2022
1GBR
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BU of 1gbr by Molmil
ORIENTATION OF PEPTIDE FRAGMENTS FROM SOS PROTEINS BOUND TO THE N-TERMINAL SH3 DOMAIN OF GRB2 DETERMINED BY NMR SPECTROSCOPY
分子名称: GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2, SOS-A PEPTIDE
著者Wittekind, M, Mapelli, C, Farmer, B.T, Suen, K.-L, Goldfarb, V, Tsao, J, Lavoie, T, Barbacid, M, Meyers, C.A, Mueller, L.
登録日1994-08-12
公開日1995-01-26
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Orientation of peptide fragments from Sos proteins bound to the N-terminal SH3 domain of Grb2 determined by NMR spectroscopy.
Biochemistry, 33, 1994
5A6J
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GH20C, Beta-hexosaminidase from Streptococcus pneumoniae
分子名称: 1,2-ETHANEDIOL, N-ACETYL-BETA-D-GLUCOSAMINIDASE
著者Cid, M, Robb, C.S, Higgins, M.A, Boraston, A.B.
登録日2015-06-26
公開日2015-09-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献A Second beta-Hexosaminidase Encoded in the Streptococcus pneumoniae Genome Provides an Expanded Biochemical Ability to Degrade Host Glycans.
J. Biol. Chem., 290, 2015
5A6K
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GH20C, Beta-hexosaminidase from Streptococcus pneumoniae in complex with Gal-NGT
分子名称: (2S,3aR,5R,6R,7R,7aR)-5-(hydroxymethyl)-2-methyl-2,3a,5,6,7,7a-hexahydro-1H-pyrano[3,2-d][1,3]thiazole-6,7-diol, GH20C
著者Cid, M, Robb, C.S, Higgins, M.A, Boraston, A.B.
登録日2015-06-26
公開日2015-09-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献A Second Beta-Hexosaminidase Encoded in the Streptococcus Pneumoniae Genome Provides an Expanded Biochemical Ability to Degrade Host Glycans
J.Biol.Chem., 290, 2015
5AC4
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GH20C, Beta-hexosaminidase from Streptococcus pneumoniae in complex with GalNAc
分子名称: 2-acetamido-2-deoxy-beta-D-galactopyranose, N-ACETYL-BETA-D-GLUCOSAMINIDASE
著者Cid, M, Robb, C.S, Higgins, M.A, Boraston, A.B.
登録日2015-08-11
公開日2015-09-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献A Second beta-Hexosaminidase Encoded in the Streptococcus pneumoniae Genome Provides an Expanded Biochemical Ability to Degrade Host Glycans.
J. Biol. Chem., 290, 2015
5A69
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GH20C, Beta-hexosaminidase from Streptococcus pneumoniae in complex with Gal-PUGNAc
分子名称: N-ACETYL-BETA-D-GLUCOSAMINIDASE, [(Z)-[(3R,4R,5R,6R)-3-acetamido-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-2-ylidene]amino] N-phenylcarbamate
著者Cid, M, Robb, C.S, Higgins, M.A, Boraston, A.B.
登録日2015-06-24
公開日2015-09-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A Second beta-Hexosaminidase Encoded in the Streptococcus pneumoniae Genome Provides an Expanded Biochemical Ability to Degrade Host Glycans.
J. Biol. Chem., 290, 2015
5A6B
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GH20C, Beta-hexosaminidase from Streptococcus pneumoniae in complex with PUGNAc
分子名称: MAGNESIUM ION, N-ACETYL-BETA-D-GLUCOSAMINIDASE, O-(2-ACETAMIDO-2-DEOXY D-GLUCOPYRANOSYLIDENE) AMINO-N-PHENYLCARBAMATE
著者Cid, M, Robb, C.S, Higgins, M.A, Boraston, A.B.
登録日2015-06-24
公開日2015-09-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献A Second beta-Hexosaminidase Encoded in the Streptococcus pneumoniae Genome Provides an Expanded Biochemical Ability to Degrade Host Glycans.
J. Biol. Chem., 290, 2015
5AC5
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GH20C, Beta-hexosaminidase from Streptococcus pneumoniae in complex with GlcNAc
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
著者Cid, M, Robb, C.S, Higgins, M.A, Boraston, A.B.
登録日2015-08-11
公開日2015-09-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献A Second beta-Hexosaminidase Encoded in the Streptococcus pneumoniae Genome Provides an Expanded Biochemical Ability to Degrade Host Glycans.
J. Biol. Chem., 290, 2015
5A6A
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GH20C, Beta-hexosaminidase from Streptococcus pneumoniae in complex with NGT
分子名称: 1,2-ETHANEDIOL, 3AR,5R,6S,7R,7AR-5-HYDROXYMETHYL-2-METHYL-5,6,7,7A-TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-DIOL, N-ACETYL-BETA-D-GLUCOSAMINIDASE
著者Cid, M, Robb, C.S, Higgins, M.A, Boraston, A.B.
登録日2015-06-24
公開日2015-09-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献A Second beta-Hexosaminidase Encoded in the Streptococcus pneumoniae Genome Provides an Expanded Biochemical Ability to Degrade Host Glycans.
J. Biol. Chem., 290, 2015

 

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