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2KH7
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BU of 2kh7 by Molmil
Solution Structure of cis-5R,6S-thymine glycol opposite complementary guanine in duplex DNA
分子名称: 5'-D(*AP*CP*AP*AP*AP*CP*GP*CP*GP*CP*AP*C)-3', 5'-D(*GP*TP*GP*CP*GP*(CTG)P*GP*TP*TP*TP*GP*T)-3'
著者Brown, K.L.
登録日2009-03-24
公開日2009-12-01
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献The cis-(5R,6S)-thymine glycol lesion occupies the wobble position when mismatched with deoxyguanosine in DNA
Biochemistry, 48, 2009
2KH8
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BU of 2kh8 by Molmil
Solution Structure of cis-5R,6S-thymine glycol opposite complementary guanine in duplex DNA
分子名称: 5'-D(*AP*CP*AP*AP*AP*CP*GP*CP*GP*CP*AP*C)-3', 5'-D(*GP*TP*GP*CP*GP*(CTG)P*GP*TP*TP*TP*GP*T)-3'
著者Brown, K.L.
登録日2009-03-24
公開日2009-12-01
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The cis-(5R,6S)-thymine glycol lesion occupies the wobble position when mismatched with deoxyguanosine in DNA
Biochemistry, 48, 2009
2KH3
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BU of 2kh3 by Molmil
NMR Structure of Aflatoxin Formamidopyrimidine alpha-anomer in duplex DNA
分子名称: 5'-D(*CP*TP*AP*TP*(FAG)P*AP*TP*TP*CP*A)-3', 5'-D(*TP*GP*AP*AP*TP*CP*AP*TP*AP*G)-3'
著者Brown, K.L.
登録日2009-03-24
公開日2009-12-15
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural perturbations induced by the alpha-anomer of the aflatoxin B(1) formamidopyrimidine adduct in duplex and single-strand DNA
J.Am.Chem.Soc., 131, 2009
2KH5
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BU of 2kh5 by Molmil
Solution Structure of cis-5R,6S-thymine glycol opposite complementary adenine in duplex DNA
分子名称: 5'-D(*AP*CP*AP*AP*AP*CP*AP*CP*GP*CP*AP*C)-3', 5'-D(*GP*TP*GP*CP*GP*(CTG)P*GP*TP*TP*TP*GP*T)-3'
著者Brown, K.L.
登録日2009-03-24
公開日2010-03-02
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Binding of the human nucleotide excision repair proteins XPA and XPC/HR23B to the 5R-thymine glycol lesion and structure of the cis-(5R,6S) thymine glycol epimer in the 5'-GTgG-3' sequence: destabilization of two base pairs at the lesion site
Nucleic Acids Res., 38, 2010
2KH4
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BU of 2kh4 by Molmil
Aflatoxin Formamidopyrimidine alpha anomer in single strand DNA
分子名称: 5'-D(*CP*TP*(FAG)P*A)-3'
著者Brown, K.L.
登録日2009-03-24
公開日2009-12-15
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural perturbations induced by the alpha-anomer of the aflatoxin B(1) formamidopyrimidine adduct in duplex and single-strand DNA
J.Am.Chem.Soc., 131, 2009
2KH6
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BU of 2kh6 by Molmil
Solution Structure of cis-5R,6S-thymine glycol opposite complementary adenine in duplex DNA
分子名称: 5'-D(*AP*CP*AP*AP*AP*CP*AP*CP*GP*CP*AP*C)-3', 5'-D(*GP*TP*GP*CP*GP*(CTG)P*GP*TP*TP*TP*GP*T)-3'
著者Brown, K.L.
登録日2009-03-24
公開日2010-03-02
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Binding of the human nucleotide excision repair proteins XPA and XPC/HR23B to the 5R-thymine glycol lesion and structure of the cis-(5R,6S) thymine glycol epimer in the 5'-GTgG-3' sequence: destabilization of two base pairs at the lesion site
Nucleic Acids Res., 38, 2010
5HGJ
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BU of 5hgj by Molmil
Structure of integrin alpha1beta1 and alpha2beta1 I-domains explain differential calcium-mediated ligand recognition
分子名称: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
著者Brown, K.L, Banerjee, S, Feigley, A, Abe, H, Blackwell, T, Zent, R, Pozzi, A, Hudson, B.H.
登録日2016-01-08
公開日2017-04-12
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.399 Å)
主引用文献Salt-bridge modulates differential calcium-mediated ligand binding to integrin alpha 1- and alpha 2-I domains.
Sci Rep, 8, 2018
5HJ2
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BU of 5hj2 by Molmil
Integrin alpha2beta1 I-domain
分子名称: CALCIUM ION, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Brown, K.L, Banerjee, S.
登録日2016-01-12
公開日2017-04-12
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.153 Å)
主引用文献Salt-bridge modulates differential calcium-mediated ligand binding to integrin alpha 1- and alpha 2-I domains.
Sci Rep, 8, 2018
2MMF
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BU of 2mmf by Molmil
Solution structure of AGA modified
分子名称: DNA_(5'-D(*CP*TP*AP*AP*(FAG)P*AP*TP*TP*CP*A)-3'), DNA_(5'-D(*TP*GP*AP*AP*TP*CP*TP*TP*AP*G)-3')
著者Li, L, Stone, M.
登録日2014-03-14
公開日2015-02-25
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献DNA Sequence Modulates Geometrical Isomerism of the trans-8,9-Dihydro-8-(2,6-diamino-4-oxo-3,4-dihydropyrimid-5-yl-formamido)-9-hydroxy Aflatoxin B1 Adduct.
Chem.Res.Toxicol., 28, 2015
2MMR
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BU of 2mmr by Molmil
AGC FAPY modified duplex Major isomer
分子名称: DNA_(5'-D(*CP*TP*AP*AP*(FAG)P*CP*TP*TP*CP*A)-3'), DNA_(5'-D(*TP*GP*AP*AP*GP*CP*TP*TP*AP*G)-3')
著者Li, L, Stone, M.
登録日2014-03-17
公開日2015-02-25
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献DNA Sequence Modulates Geometrical Isomerism of the trans-8,9-Dihydro-8-(2,6-diamino-4-oxo-3,4-dihydropyrimid-5-yl-formamido)-9-hydroxy Aflatoxin B1 Adduct.
Chem.Res.Toxicol., 28, 2015
2MMS
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BU of 2mms by Molmil
AG(7-deaza)G FAPY modified duplex
分子名称: DNA_(5'-D(*CP*TP*AP*AP*(FAG)P*(7GU)P*TP*TP*CP*A)-3'), DNA_(5'-D(*TP*GP*AP*AP*CP*CP*TP*TP*AP*G)-3')
著者Li, L, Stone, M.
登録日2014-03-17
公開日2015-02-25
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献DNA Sequence Modulates Geometrical Isomerism of the trans-8,9-Dihydro-8-(2,6-diamino-4-oxo-3,4-dihydropyrimid-5-yl-formamido)-9-hydroxy Aflatoxin B1 Adduct.
Chem.Res.Toxicol., 28, 2015
2MMQ
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BU of 2mmq by Molmil
Solution structure of AGT FAPY Modified duplex
分子名称: DNA_(5'-D(*CP*TP*AP*AP*(FAG)P*TP*TP*TP*CP*A)-3'), DNA_(5'-D(*TP*GP*AP*AP*AP*CP*TP*TP*AP*G)-3')
著者Li, L, Stone, M.
登録日2014-03-17
公開日2015-02-25
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献DNA Sequence Modulates Geometrical Isomerism of the trans-8,9-Dihydro-8-(2,6-diamino-4-oxo-3,4-dihydropyrimid-5-yl-formamido)-9-hydroxy Aflatoxin B1 Adduct.
Chem.Res.Toxicol., 28, 2015
3PVX
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BU of 3pvx by Molmil
Binary complex of Aflatoxin B1 Adduct modified DNA (AFB1-FAPY) with DNA Polymerase IV
分子名称: CALCIUM ION, DNA (5'-D(*AP*TP*TP*(PVX)P*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3'), DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3'), ...
著者Banerjee, S.
登録日2010-12-07
公開日2011-08-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.03 Å)
主引用文献Bypass of Aflatoxin B(1) Adducts by the Sulfolobus solfataricus DNA Polymerase IV.
J.Am.Chem.Soc., 133, 2011
3PW0
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BU of 3pw0 by Molmil
Ternary complex of Aflatoxin B1 Adduct modified DNA (AFB1-FAPY) with DNA Polymerase IV and incoming dATP
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3'), ...
著者Banerjee, S.
登録日2010-12-07
公開日2011-08-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Bypass of Aflatoxin B(1) Adducts by the Sulfolobus solfataricus DNA Polymerase IV.
J.Am.Chem.Soc., 133, 2011
3PW7
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BU of 3pw7 by Molmil
Ternary complex of Aflatoxin B1 Adduct modified DNA (AFB1-N7-Gua) with DNA Polymerase IV and incoming dCTP
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 8,9-DIHYDRO-9-HYDROXY-AFLATOXIN B1, CALCIUM ION, ...
著者Banerjee, S.
登録日2010-12-07
公開日2011-08-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Bypass of Aflatoxin B(1) Adducts by the Sulfolobus solfataricus DNA Polymerase IV.
J.Am.Chem.Soc., 133, 2011
3PW2
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BU of 3pw2 by Molmil
Ternary complex of Aflatoxin B1 Adduct modified DNA (AFB1-FAPY) with DNA Polymerase IV and incoming dTTP
分子名称: CALCIUM ION, DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3'), DNA (5'-D(*TP*TP*(PVX)P*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3'), ...
著者Banerjee, S.
登録日2010-12-07
公開日2011-08-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.74 Å)
主引用文献Bypass of Aflatoxin B(1) Adducts by the Sulfolobus solfataricus DNA Polymerase IV.
J.Am.Chem.Soc., 133, 2011
3PW5
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BU of 3pw5 by Molmil
Ternary complex of Aflatoxin B1 Adduct modified DNA (AFB1-N7-Gua) with DNA Polymerase IV and incoming dTTP
分子名称: 8,9-DIHYDRO-9-HYDROXY-AFLATOXIN B1, CALCIUM ION, DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3'), ...
著者Banerjee, S.
登録日2010-12-07
公開日2011-08-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Bypass of Aflatoxin B(1) Adducts by the Sulfolobus solfataricus DNA Polymerase IV.
J.Am.Chem.Soc., 133, 2011
3PW4
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BU of 3pw4 by Molmil
Ternary complex of Aflatoxin B1 Adduct modified DNA (AFB1-N7-Gua) with DNA Polymerase IV and incoming dATP
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 8,9-DIHYDRO-9-HYDROXY-AFLATOXIN B1, CALCIUM ION, ...
著者Banerjee, S.
登録日2010-12-07
公開日2011-08-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Bypass of Aflatoxin B(1) Adducts by the Sulfolobus solfataricus DNA Polymerase IV.
J.Am.Chem.Soc., 133, 2011
5UJE
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BU of 5uje by Molmil
SbnI with C-terminal truncation from Staphylococcus aureus
分子名称: GLYCEROL, SbnI protein
著者Murphy, M.E.P, Verstraete, M.M.
登録日2017-01-17
公開日2018-01-24
最終更新日2020-12-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献SbnI is a free serine kinase that generates O -phospho-l-serine for staphyloferrin B biosynthesis in Staphylococcus aureus .
J.Biol.Chem., 293, 2018

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件を2024-10-09に公開中

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