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6DFE
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BU of 6dfe by Molmil
The structure of a ternary complex of E. coli WaaC
分子名称: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-4)-3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid-(2-6)-2-acetamido-2-deoxy-4-O-phosphono-beta-D-glucopyranose-(1-6)-2-acetamido-2-deoxy-1-O-phosphono-alpha-D-glucopyranose, ADP-heptose--LPS heptosyltransferase, [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl (2R)-1-{(2S,3S,4R,5S,6R)-6-[(1S)-1,2-dihydroxyethyl]-3,4,5-trihydroxytetrahydro-2H-pyran-2-yl}propan-2-yl hydrogen (R)-phosphate (non-preferred name)
著者Worrall, L.J, Blaukopf, M, Withers, S.G, Strynadka, N.C.J.
登録日2018-05-14
公開日2018-09-05
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Insights into Heptosyltransferase I Catalysis and Inhibition through the Structure of Its Ternary Complex.
Structure, 26, 2018
2X7N
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BU of 2x7n by Molmil
Mechanism of eIF6s anti-association activity
分子名称: 60S RIBOSOMAL PROTEIN L23, 60S RIBOSOMAL PROTEIN L24-A, EUKARYOTIC TRANSLATION INITIATION FACTOR 6, ...
著者Gartmann, M, Blau, M, Armache, J.-P, Mielke, T, Topf, M, Beckmann, R.
登録日2010-03-02
公開日2010-03-31
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (11.8 Å)
主引用文献Mechanism of Eif6-Mediated Inhibition of Ribosomal Subunit Joining.
J.Biol.Chem., 285, 2010
2IX8
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BU of 2ix8 by Molmil
MODEL FOR EEF3 BOUND TO AN 80S RIBOSOME
分子名称: ELONGATION FACTOR 3A
著者Andersen, C.B.F, Becker, T, Blau, M, Anand, M, Halic, M, Balar, B, Mielke, T, Boesen, T, Pedersen, J.S, Spahn, C.M.T, Kinzy, T.G, Andersen, G.R, Beckmann, R.
登録日2006-07-07
公開日2007-07-10
最終更新日2017-08-23
実験手法ELECTRON MICROSCOPY (6 Å)
主引用文献Structure of Eef3 and the Mechanism of Transfer RNA Release from the E-Site.
Nature, 443, 2006
2IX3
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BU of 2ix3 by Molmil
Structure of yeast Elongation Factor 3
分子名称: ELONGATION FACTOR 3, SULFATE ION
著者Andersen, C.B.F, Becker, T, Blau, M, Anand, M, Halic, M, Balar, B, Mielke, T, Boesen, T, Pedersen, J.S, Spahn, C.M.T, Kinzy, T.G, Andersen, G.R, Beckmann, R.
登録日2006-07-06
公開日2006-08-08
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of Eef3 and the Mechanism of Transfer RNA Release from the E-Site.
Nature, 443, 2006
2IWH
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BU of 2iwh by Molmil
Structure of yeast Elongation Factor 3 in complex with ADPNP
分子名称: ELONGATION FACTOR 3A, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, SULFATE ION
著者Andersen, C.B.F, Becker, T, Blau, M, Anand, M, Halic, M, Balar, B, Mielke, T, Boesen, T, Pedersen, J.S, Spahn, C.M.T, Kinzy, T.G, Andersen, G.R, Beckmann, R.
登録日2006-06-30
公開日2006-08-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure of Eef3 and the Mechanism of Transfer RNA Release from the E-Site.
Nature, 443, 2006
2IW3
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BU of 2iw3 by Molmil
Elongation Factor 3 in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, ELONGATION FACTOR 3A, SULFATE ION
著者Andersen, C.B.F, Becker, T, Blau, M, Anand, M, Halic, M, Balar, B, Mielke, T, Boesen, T, Pedersen, J.S, Spahn, C.M.T, Kinzy, T.G, Andersen, G.R, Beckmann, R.
登録日2006-06-26
公開日2006-08-17
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of Eef3 and the Mechanism of Transfer RNA Release from the E-Site.
Nature, 443, 2006
2J28
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BU of 2j28 by Molmil
MODEL OF E. COLI SRP BOUND TO 70S RNCS
分子名称: 23S RIBOSOMAL RNA, 4.5S SIGNAL RECOGNITION PARTICLE RNA, 50S ribosomal protein L11, ...
著者Halic, M, Blau, M, Becker, T, Mielke, T, Pool, M.R, Wild, K, Sinning, I, Beckmann, R.
登録日2006-08-16
公開日2006-11-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (9.5 Å)
主引用文献Following the Signal Sequence from Ribosomal Tunnel Exit to Signal Recognition Particle
Nature, 444, 2006
2J37
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BU of 2j37 by Molmil
MODEL OF MAMMALIAN SRP BOUND TO 80S RNCS
分子名称: 60S RIBOSOMAL PROTEIN L23, RIBOSOMAL PROTEIN L31, RIBOSOMAL PROTEIN L35, ...
著者Halic, M, Blau, M, Becker, T, Mielke, T, Pool, M.R, Wild, K, Sinning, I, Beckmann, R.
登録日2006-08-18
公開日2006-11-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (8.7 Å)
主引用文献Following the signal sequence from ribosomal tunnel exit to signal recognition particle.
Nature, 444, 2006
5A53
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BU of 5a53 by Molmil
Crystal Structure of the Rpf2-Rrs1 complex
分子名称: REGULATOR OF RIBOSOME BIOSYNTHESIS, RIBOSOME BIOGENESIS PROTEIN RPF2, SULFATE ION
著者Madru, C, Lebaron, S, Blaud, M, Delbos, L, Rety, S, Leulliot, N.
登録日2015-06-16
公開日2015-10-21
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.401 Å)
主引用文献Chaperoning 5S RNA Assembly.
Genes Dev., 29, 2015
3ZUZ
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BU of 3zuz by Molmil
Structure of Shq1p C-terminal domain
分子名称: ISOPROPYL ALCOHOL, PROTEIN SHQ1
著者Walbott, H, Machado-Pinilla, R, Liger, D, Blaud, M, Rety, S, Grozdanov, P.N, Godin, K, vanTilbeurgh, H, Varani, G, Meier, U.T, Leulliot, N.
登録日2011-07-22
公開日2011-11-30
最終更新日2019-02-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The H/Aca Rnp Assembly Factor Shq1 Functions as an RNA Mimic.
Genes Dev., 25, 2011
3ZV0
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BU of 3zv0 by Molmil
Structure of the SHQ1P-CBF5P complex
分子名称: GLYCEROL, H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 4, PROTEIN SHQ1
著者Walbott, H, Machado-Pinilla, R, Liger, D, Blaud, M, Rety, S, Grozdanov, P.N, Godin, K, vanTilbeurgh, H, Varani, G, Meier, U.T, Leulliot, N.
登録日2011-07-22
公開日2011-11-30
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The H/Aca Rnp Assembly Factor Shq1 Functions as an RNA Mimic.
Genes Dev., 25, 2011
4CVN
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BU of 4cvn by Molmil
Structure of the Fap7-Rps14 complex
分子名称: 30S RIBOSOMAL PROTEIN S11, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Loch, J, Blaud, M, Rety, S, Lebaron, S, Deschamps, P, Bareille, J, Jombart, J, Robert-Paganin, J, Delbos, L, Chardon, F, Zhang, E, Charenton, C, Tollervey, D, Leulliot, N.
登録日2014-03-28
公開日2014-05-28
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.121 Å)
主引用文献RNA Mimicry by the Fap7 Adenylate Kinase in Ribosome Biogenesis
Plos Biol., 12, 2014
4CW7
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BU of 4cw7 by Molmil
Structure of the Fap7-Rps14 complex in complex with ATP
分子名称: 30S RIBOSOMAL PROTEIN S11, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Loc'h, J, Blaud, M, Rety, S, Lebaron, S, Deschamps, P, Bareille, J, Jombart, J, Robert-Paganin, J, Delbos, L, Chardon, F, Zhang, E, Charenton, C, Tollervey, D, Leulliot, N.
登録日2014-04-01
公開日2014-05-28
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献RNA Mimicry by the Fap7 Adenylate Kinase in Ribosome Biogenesis
Plos Biol., 12, 2014
3KL4
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BU of 3kl4 by Molmil
Recognition of a signal peptide by the signal recognition particle
分子名称: Signal peptide of yeast dipeptidyl aminopeptidase B, Signal recognition 54 kDa protein
著者Janda, C.Y, Nagai, K, Li, J, Oubridge, C.
登録日2009-11-06
公開日2010-03-31
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Recognition of a signal peptide by the signal recognition particle.
Nature, 465, 2010
4X6L
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Crystal structure of S. aureus TarM in complex with UDP
分子名称: TarM, URIDINE-5'-DIPHOSPHATE
著者Worrall, L.J, Sobhanifar, S, Gruninger, R.J, Strynadka, N.C.
登録日2014-12-08
公開日2015-02-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.19 Å)
主引用文献Structure and mechanism of Staphylococcus aureus TarM, the wall teichoic acid alpha-glycosyltransferase.
Proc.Natl.Acad.Sci.USA, 112, 2015
4X7P
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BU of 4x7p by Molmil
Crystal structure of apo S. aureus TarM
分子名称: SULFATE ION, TarM
著者Worrall, L.J, Sobhanifar, S, Gruninger, R.J, Strynadka, N.C.
登録日2014-12-09
公開日2015-02-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structure and mechanism of Staphylococcus aureus TarM, the wall teichoic acid alpha-glycosyltransferase.
Proc.Natl.Acad.Sci.USA, 112, 2015
8V2T
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BU of 8v2t by Molmil
Phosphoheptose isomerase GMHA from Burkholderia pseudomallei bound to inhibitor Mut148591
分子名称: 1,5,6-trideoxy-6,6-difluoro-1-(N-hydroxyformamido)-6-phosphono-D-ribo-hexitol, CHLORIDE ION, Phosphoheptose isomerase, ...
著者Junop, M.S, Brown, C, Szabla, R.
登録日2023-11-23
公開日2023-12-06
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.402 Å)
主引用文献Potentiating Activity of GmhA Inhibitors on Gram-Negative Bacteria.
J.Med.Chem., 67, 2024
8V4J
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BU of 8v4j by Molmil
Phosphoheptose isomerase GMHA from Burkholderia pseudomallei bound to inhibitor Mut148233
分子名称: 1-deoxy-1-[formyl(hydroxy)amino]-5-O-phosphono-D-ribitol, CHLORIDE ION, Phosphoheptose isomerase, ...
著者Junop, M.S, Brown, C, Szabla, R.
登録日2023-11-29
公開日2023-12-13
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.31 Å)
主引用文献Potentiating Activity of GmhA Inhibitors on Gram-Negative Bacteria.
J.Med.Chem., 67, 2024
5JPT
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BU of 5jpt by Molmil
CRYSTAL STRUCTURE OF THE PRP43P DEAH-BOX RNA HELICASE IN COMPLEX WITH CDP
分子名称: ACETATE ION, CYTIDINE-5'-DIPHOSPHATE, GLYCEROL, ...
著者Robert-Paganin, J, Rety, S, Leulliot, N.
登録日2016-05-04
公開日2017-02-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.935 Å)
主引用文献Functional link between DEAH/RHA helicase Prp43 activation and ATP base binding.
Nucleic Acids Res., 45, 2017
2M3F
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BU of 2m3f by Molmil
NMR structure of Rsa1p238-259 from S. Cerevisiae
分子名称: Ribosome assembly 1 protein
著者Quinternet, M, Manival, X.
登録日2013-01-17
公開日2013-11-27
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Characterization of the interaction between protein Snu13p/15.5K and the Rsa1p/NUFIP factor and demonstration of its functional importance for snoRNP assembly.
Nucleic Acids Res., 42, 2014
3ZPH
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BU of 3zph by Molmil
Bacterial chalcone isomerase in closed conformation from Eubacterium ramulus at 2.8 A resolution
分子名称: CHALCONE ISOMERASE, CHLORIDE ION, GLYCEROL
著者Thomsen, M, Palm, G.J, Hinrichs, W.
登録日2013-02-27
公開日2014-01-15
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Enzymatic conversion of flavonoids using bacterial chalcone isomerase and enoate reductase.
Angew.Chem.Int.Ed.Engl., 53, 2014
4X7M
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Crystal structure of S. aureus TarM G117R mutant in complex with UDP and UDP-GlcNAc
分子名称: TarM, URIDINE-5'-DIPHOSPHATE, URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE
著者Worrall, L.J, Sobhanifar, S, Strynadka, N.C.
登録日2014-12-09
公開日2015-03-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure and mechanism of Staphylococcus aureus TarM, the wall teichoic acid alpha-glycosyltransferase.
Proc.Natl.Acad.Sci.USA, 112, 2015
4X7R
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Crystal structure of S. aureus TarM G117R mutant in complex with Fondaparinux, alpha-GlcNAc-glycerol and UDP
分子名称: (2S)-2,3-dihydroxypropyl 2-acetamido-2-deoxy-alpha-D-glucopyranoside, 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-4)-2-deoxy-3,6-di-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-methyl 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranoside, TarM, ...
著者Worrall, L.J, Sobhanifar, S, Strynadka, N.C.
登録日2014-12-09
公開日2015-02-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structure and mechanism of Staphylococcus aureus TarM, the wall teichoic acid alpha-glycosyltransferase.
Proc.Natl.Acad.Sci.USA, 112, 2015
4C9S
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BACTERIAL CHALCONE ISOMERASE IN open CONFORMATION FROM EUBACTERIUM RAMULUS AT 1.8 A RESOLUTION
分子名称: CHALCONE ISOMERASE, CHLORIDE ION, GLYCEROL, ...
著者Thomsen, M, Palm, G.J, Hinrichs, W.
登録日2013-10-03
公開日2014-10-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure and Catalytic Mechanism of the Evolutionarily Unique Bacterial Chalcone Isomerase
Acta Crystallogr.,Sect.D, 71, 2015
4C9T
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BACTERIAL CHALCONE ISOMERASE IN open CONFORMATION FROM EUBACTERIUM RAMULUS AT 2.0 A RESOLUTION, SelenoMet derivative
分子名称: CHALCONE ISOMERASE, CHLORIDE ION, GLYCEROL, ...
著者Thomsen, M, Palm, G.J, Hinrichs, W.
登録日2013-10-03
公開日2014-10-22
最終更新日2015-04-22
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Structure and Catalytic Mechanism of the Evolutionarily Unique Bacterial Chalcone Isomerase
Acta Crystallogr.,Sect.D, 71, 2015

 

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