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BU of 7zxj by Molmil

K563A Mutant of Recombinant CODH-II
分子名称:	Carbon monoxide dehydrogenase 2, DI(HYDROXYETHYL)ETHER, FE (II) ION, ...
著者	Basak, Y, Jeoung, J.H, Dobbek, H.
登録日	2022-05-21
公開日	2023-03-15
最終更新日	2024-02-07
実験手法	X-RAY DIFFRACTION (1.249 Å)
主引用文献	Substrate Activation at the Ni,Fe Cluster of CO Dehydrogenases: The Influence of the Protein Matrix Acs Catalysis, 2022

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BU of 7zxx by Molmil

K563H Mutant of Recombinant CODH-II
分子名称:	Carbon monoxide dehydrogenase 2, DI(HYDROXYETHYL)ETHER, FE2/S2 (INORGANIC) CLUSTER, ...
著者	Basak, Y, Jeoung, J.H, Dobbek, H.
登録日	2022-05-23
公開日	2023-03-15
最終更新日	2024-02-07
実験手法	X-RAY DIFFRACTION (1.4 Å)
主引用文献	Substrate Activation at the Ni,Fe Cluster of CO Dehydrogenases: The Influence of the Protein Matrix Acs Catalysis, 2022

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BU of 7zy1 by Molmil

I567A Mutant of Recombinant CODH-II
分子名称:	Carbon monoxide dehydrogenase 2, FE (II) ION, FE(3)-NI(1)-S(4) CLUSTER, ...
著者	Basak, Y, Jeoung, J.H, Dobbek, H.
登録日	2022-05-23
公開日	2023-03-15
最終更新日	2024-02-07
実験手法	X-RAY DIFFRACTION (1.434 Å)
主引用文献	Substrate Activation at the Ni,Fe Cluster of CO Dehydrogenases: The Influence of the Protein Matrix Acs Catalysis, 2022

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BU of 7zxc by Molmil

H96D Mutant of Recombinant CODH-II
分子名称:	Carbon monoxide dehydrogenase 2, FE (III) ION, FE(3)-NI(1)-S(4) CLUSTER, ...
著者	Basak, Y, Jeoung, J.H, Dobbek, H.
登録日	2022-05-20
公開日	2023-03-15
最終更新日	2024-02-07
実験手法	X-RAY DIFFRACTION (1.696 Å)
主引用文献	Substrate Activation at the Ni,Fe Cluster of CO Dehydrogenases: The Influence of the Protein Matrix Acs Catalysis, 2022

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BU of 7zx5 by Molmil

I567T Mutant of Recombinant CODH-II
分子名称:	Carbon monoxide dehydrogenase 2, FE (II) ION, FE(3)-NI(1)-S(4) CLUSTER, ...
著者	Basak, Y, Jeoung, J.H, Dobbek, H.
登録日	2022-05-20
公開日	2023-03-15
最終更新日	2024-02-07
実験手法	X-RAY DIFFRACTION (1.544 Å)
主引用文献	Substrate Activation at the Ni,Fe Cluster of CO Dehydrogenases: The Influence of the Protein Matrix Acs Catalysis, 2022

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BU of 7zxl by Molmil

H93A Mutant of Recombinant CODH-II
分子名称:	Carbon monoxide dehydrogenase 2, FE (II) ION, FE(3)-NI(1)-S(4) CLUSTER, ...
著者	Basak, Y, Jeoung, J.-H, Dobbek, H.
登録日	2022-05-21
公開日	2023-03-15
最終更新日	2024-02-07
実験手法	X-RAY DIFFRACTION (1.2 Å)
主引用文献	Substrate Activation at the Ni,Fe Cluster of CO Dehydrogenases: The Influence of the Protein Matrix Acs Catalysis, 2022

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BU of 7zx6 by Molmil

I567L Mutant of Recombinant CODH-II
分子名称:	Carbon monoxide dehydrogenase 2, FE (II) ION, FE(3)-NI(1)-S(4) CLUSTER, ...
著者	Basak, Y, Jeoung, J.-H, Dobbek, H.
登録日	2022-05-20
公開日	2023-03-15
最終更新日	2024-02-07
実験手法	X-RAY DIFFRACTION (1.447 Å)
主引用文献	Substrate Activation at the Ni,Fe Cluster of CO Dehydrogenases: The Influence of the Protein Matrix Acs Catalysis, 2022

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BU of 7zx3 by Molmil

C295D Mutant of Recombinant CODH-II
分子名称:	Carbon monoxide dehydrogenase 2, DI(HYDROXYETHYL)ETHER, FE2/S2 (INORGANIC) CLUSTER, ...
著者	Basak, Y, Jeoung, J.H, Dobbek, H.
登録日	2022-05-20
公開日	2023-03-15
最終更新日	2024-02-07
実験手法	X-RAY DIFFRACTION (1.683 Å)
主引用文献	Substrate Activation at the Ni,Fe Cluster of CO Dehydrogenases: The Influence of the Protein Matrix Acs Catalysis, 2022

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BU of 8on2 by Molmil

NI,FE-CODH -600mV state : 24 h Dioxygen Exposure
分子名称:	Carbon monoxide dehydrogenase 2, FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者	Basak, Y, Jeoung, J.-H, Dobbek, H.
登録日	2023-03-31
公開日	2023-12-06
実験手法	X-RAY DIFFRACTION (1.58 Å)
主引用文献	Stepwise O 2 -Induced Rearrangement and Disassembly of the [NiFe 4 (OH)( mu 3 -S) 4 ] Active Site Cluster of CO Dehydrogenase. Angew.Chem.Int.Ed.Engl., 62, 2023

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BU of 8omx by Molmil

NI,FE-CODH -600mV state : 1 min Dioxygen Exposure
分子名称:	Carbon monoxide dehydrogenase 2, FE (II) ION, FE(4)-NI(1)-S(5) CLUSTER, ...
著者	Basak, Y, Jeoung, J.-H, Dobbek, H.
登録日	2023-03-31
公開日	2023-12-06
実験手法	X-RAY DIFFRACTION (1.5 Å)
主引用文献	Stepwise O 2 -Induced Rearrangement and Disassembly of the [NiFe 4 (OH)( mu 3 -S) 4 ] Active Site Cluster of CO Dehydrogenase. Angew.Chem.Int.Ed.Engl., 62, 2023

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BU of 8on1 by Molmil

NI,FE-CODH -600mV state : 4 h Dioxygen Exposure
分子名称:	Carbon monoxide dehydrogenase 2, FE (II) ION, FE (III) ION, ...
著者	Basak, Y, Jeoung, J.-H, Dobbek, H.
登録日	2023-03-31
公開日	2023-12-06
実験手法	X-RAY DIFFRACTION (1.37 Å)
主引用文献	Stepwise O 2 -Induced Rearrangement and Disassembly of the [NiFe 4 (OH)( mu 3 -S) 4 ] Active Site Cluster of CO Dehydrogenase. Angew.Chem.Int.Ed.Engl., 62, 2023

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BU of 8omy by Molmil

NI,FE-CODH -600mV state : 35 min Dioxygen Exposure
分子名称:	Carbon monoxide dehydrogenase 2, FE (II) ION, FE (III) ION, ...
著者	Basak, Y, Jeoung, J.-H, Dobbek, H.
登録日	2023-03-31
公開日	2023-12-06
実験手法	X-RAY DIFFRACTION (1.37 Å)
主引用文献	Stepwise O 2 -Induced Rearrangement and Disassembly of the [NiFe 4 (OH)( mu 3 -S) 4 ] Active Site Cluster of CO Dehydrogenase. Angew.Chem.Int.Ed.Engl., 62, 2023

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BU of 8on3 by Molmil

NI,FE-CODH -320mV + CN state : 24 h Dioxygen Exposure
分子名称:	Carbon monoxide dehydrogenase 2, DI(HYDROXYETHYL)ETHER, FE (II) ION, ...
著者	Basak, Y, Jeoung, J.-H, Dobbek, H.
登録日	2023-03-31
公開日	2023-12-06
実験手法	X-RAY DIFFRACTION (1.74 Å)
主引用文献	Stepwise O 2 -Induced Rearrangement and Disassembly of the [NiFe 4 (OH)( mu 3 -S) 4 ] Active Site Cluster of CO Dehydrogenase. Angew.Chem.Int.Ed.Engl., 62, 2023

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BU of 8on0 by Molmil

NI,FE-CODH -600mV state : 90 min Dioxygen Exposure
分子名称:	Carbon monoxide dehydrogenase 2, FE (II) ION, FE (III) ION, ...
著者	Basak, Y, Jeoung, J.-H, Dobbek, H.
登録日	2023-03-31
公開日	2023-12-06
実験手法	X-RAY DIFFRACTION (1.29 Å)
主引用文献	Stepwise O 2 -Induced Rearrangement and Disassembly of the [NiFe 4 (OH)( mu 3 -S) 4 ] Active Site Cluster of CO Dehydrogenase. Angew.Chem.Int.Ed.Engl., 62, 2023

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BU of 7zkj by Molmil

CODH/ACS complex of C. hydrogenoformans
分子名称:	(4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, ...
著者	Ruickoldt, J, Jeoung, J.-H, Basak, Y, Domnik, L, Dobbek, H.
登録日	2022-04-13
公開日	2022-11-02
最終更新日	2024-01-31
実験手法	X-RAY DIFFRACTION (2.04 Å)
主引用文献	On the Kinetics of CO2 Reduction by Ni, Fe-CO Dehydrogenases ACS Catal., 2022

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BU of 7zkk by Molmil

A216H variant of the CODH/ACS complex of C. hydrogenoformans
分子名称:	(4S)-2-METHYL-2,4-PENTANEDIOL, ACETATE ION, CO-methylating acetyl-CoA synthase, ...
著者	Ruickoldt, J, Jeoung, J.-H, Basak, Y, Domnik, L, Dobbek, H.
登録日	2022-04-13
公開日	2022-11-02
最終更新日	2024-01-31
実験手法	X-RAY DIFFRACTION (1.97 Å)
主引用文献	On the Kinetics of CO2 Reduction by Ni, Fe-CO Dehydrogenases Acs Catalysis, 2022

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BU of 7zkv by Molmil

F231A variant of the CODH/ACS complex of C. hydrogenoformans
分子名称:	(4R)-2-METHYLPENTANE-2,4-DIOL, ACETATE ION, CO-methylating acetyl-CoA synthase, ...
著者	Ruickoldt, J, Jeoung, J.-H, Basak, Y, Domnik, L, Dobbek, H.
登録日	2022-04-13
公開日	2022-11-02
最終更新日	2024-06-19
実験手法	X-RAY DIFFRACTION (2.066 Å)
主引用文献	Coupling CO2 Reduction and Acetyl-CoA Formation: The Role of a CO Capturing Tunnel in Enzymatic Catalysis. Angew.Chem.Int.Ed.Engl., 2024

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BU of 5az2 by Molmil

Crystal structure of the Fab fragment of 9E5, a murine monoclonal antibody specific for human epiregulin
分子名称:	anti-human epiregulin antibody 9E5 Fab heavy chain, anti-human epiregulin antibody 9E5 Fab light chain
著者	Kado, Y, Mizohata, E, Nagatoishi, S, Iijima, M, Shinoda, K, Miyafusa, T, Nakayama, T, Yoshizumi, T, Sugiyama, A, Kawamura, T, Lee, Y.H, Matsumura, H, Doi, H, Fujitani, H, Kodama, T, Shibasaki, Y, Tsumoto, K, Inoue, T.
登録日	2015-09-16
公開日	2015-12-09
最終更新日	2020-02-26
実験手法	X-RAY DIFFRACTION (1.603 Å)
主引用文献	Epiregulin Recognition Mechanisms by Anti-epiregulin Antibody 9E5: STRUCTURAL, FUNCTIONAL, AND MOLECULAR DYNAMICS SIMULATION ANALYSES J.Biol.Chem., 291, 2016

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BU of 5e8d by Molmil

Crystal structure of human epiregulin in complex with the Fab fragment of murine monoclonal antibody 9E5
分子名称:	CHLORIDE ION, GLYCEROL, Proepiregulin, ...
著者	Kado, Y, Mizohata, E, Nagatoishi, S, Iijima, M, Shinoda, K, Miyafusa, T, Nakayama, T, Yoshizumi, T, Sugiyama, A, Kawamura, T, Lee, Y.H, Matsumura, H, Doi, H, Fujitani, H, Kodama, T, Shibasaki, Y, Tsumoto, K, Inoue, T.
登録日	2015-10-14
公開日	2015-12-09
最終更新日	2020-02-19
実験手法	X-RAY DIFFRACTION (2.5 Å)
主引用文献	Epiregulin Recognition Mechanisms by Anti-epiregulin Antibody 9E5: STRUCTURAL, FUNCTIONAL, AND MOLECULAR DYNAMICS SIMULATION ANALYSES J.Biol.Chem., 291, 2016

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件を2024-07-17に公開中

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