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5YK9
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BU of 5yk9 by Molmil
Crystal structure of selenomethionine-labelled indole prenyltransferase AmbP1
分子名称: AmbP1
著者Awakawa, T, Nakashima, Y, Liu, X, Abe, I.
登録日2017-10-12
公開日2018-06-06
最終更新日2018-06-13
実験手法X-RAY DIFFRACTION (3.001 Å)
主引用文献Molecular Insight into the Mg2+-Dependent Allosteric Control of Indole Prenylation by Aromatic Prenyltransferase AmbP1
Angew. Chem. Int. Ed. Engl., 57, 2018
5Z43
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BU of 5z43 by Molmil
Crystal structure of prenyltransferase AmbP1 apo structure
分子名称: AmbP1, MAGNESIUM ION
著者Awakawa, T, Nakashima, Y, Mori, T, Abe, I.
登録日2018-01-10
公開日2018-06-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.361 Å)
主引用文献Molecular Insight into the Mg2+-Dependent Allosteric Control of Indole Prenylation by Aromatic Prenyltransferase AmbP1
Angew. Chem. Int. Ed. Engl., 57, 2018
5Z45
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BU of 5z45 by Molmil
Crystal structure of prenyltransferase AmbP1 pH6.5 complexed with GSPP and cis-indolyl vinyl isonitrile
分子名称: 3-[(Z)-2-isocyanoethenyl]-1H-indole, AmbP1, GERANYL S-THIOLODIPHOSPHATE, ...
著者Awakawa, T, Nakashima, Y, Mori, T, Abe, I.
登録日2018-01-10
公開日2018-06-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.601 Å)
主引用文献Molecular Insight into the Mg2+-Dependent Allosteric Control of Indole Prenylation by Aromatic Prenyltransferase AmbP1
Angew. Chem. Int. Ed. Engl., 57, 2018
5Z44
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BU of 5z44 by Molmil
Crystal structure of prenyltransferase AmbP1 complexed with GSPP
分子名称: AmbP1, GERANYL S-THIOLODIPHOSPHATE, MAGNESIUM ION
著者Awakawa, T, Nakashima, Y, Mori, T, Abe, I.
登録日2018-01-10
公開日2018-06-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.458 Å)
主引用文献Molecular Insight into the Mg2+-Dependent Allosteric Control of Indole Prenylation by Aromatic Prenyltransferase AmbP1
Angew. Chem. Int. Ed. Engl., 57, 2018
5Z46
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BU of 5z46 by Molmil
Crystal structure of prenyltransferase AmbP1 pH8 complexed with GSPP and cis-indolyl vinyl isonitrile
分子名称: 3-[(Z)-2-isocyanoethenyl]-1H-indole, AmbP1, GERANYL S-THIOLODIPHOSPHATE, ...
著者Awakawa, T, Nakashima, Y, Mori, T, Abe, I.
登録日2018-01-10
公開日2018-06-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.999 Å)
主引用文献Molecular Insight into the Mg2+-Dependent Allosteric Control of Indole Prenylation by Aromatic Prenyltransferase AmbP1
Angew. Chem. Int. Ed. Engl., 57, 2018
8K3H
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BU of 8k3h by Molmil
Cryo-EM structure of PseP with NAD at 2.86 angstrom resolution
分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PseP
著者Mori, T, Awakawa, T, Adachi, N, Abe, I.
登録日2023-07-15
公開日2024-07-17
実験手法ELECTRON MICROSCOPY (2.86 Å)
主引用文献Cryo-EM structure of PseP with NAD at 2.86 angstrom resolution
To Be Published
8K3I
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BU of 8k3i by Molmil
Cryo-EM structure of PseP apo
分子名称: PseP
著者Mori, T, Awakawa, T, Adachi, N, Abe, I.
登録日2023-07-15
公開日2024-07-17
実験手法ELECTRON MICROSCOPY (2.83 Å)
主引用文献Cryo-EM structure of PseP apo
To Be Published
7VBQ
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BU of 7vbq by Molmil
Heterodimer structure of Fe(II)/(alpha)ketoglutarate-dependent dioxygenase TlxIJ
分子名称: FE (III) ION, Fe(II)/(alpha)ketoglutarate-dependent dioxygenase TlxI, Fe(II)/(alpha)ketoglutarate-dependent dioxygenase TlxJ, ...
著者Li, X, Awakawa, T, Mori, T, Abe, I.
登録日2021-09-01
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Heterodimeric Non-heme Iron Enzymes in Fungal Meroterpenoid Biosynthesis.
J.Am.Chem.Soc., 143, 2021
7VBR
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BU of 7vbr by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase TlxI
分子名称: Fe(II)/(alpha)ketoglutarate-dependent dioxygenase TlxI
著者Li, X, Awakawa, T, Mori, T, Abe, I.
登録日2021-09-01
公開日2022-04-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Heterodimeric Non-heme Iron Enzymes in Fungal Meroterpenoid Biosynthesis.
J.Am.Chem.Soc., 143, 2021
7EEH
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BU of 7eeh by Molmil
Selenomethionine labeled Fe(II)/(alpha)ketoglutarate-dependent dioxygenase TqaL
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FE (III) ION, TqaL
著者Bunno, R, Mori, T, Awakawa, T, Abe, I.
登録日2021-03-18
公開日2021-05-26
最終更新日2021-07-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Aziridine Formation by a Fe II / alpha-Ketoglutarate Dependent Oxygenase and 2-Aminoisobutyrate Biosynthesis in Fungi.
Angew.Chem.Int.Ed.Engl., 60, 2021
5Y4G
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BU of 5y4g by Molmil
Apo Structure of AmbP3
分子名称: AmbP3
著者Wong, C.P, Awakawa, T, Nakashima, Y.
登録日2017-08-03
公開日2018-07-18
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Two Distinct Substrate Binding Modes for the Normal and Reverse Prenylation of Hapalindoles by the Prenyltransferase AmbP3
Angew. Chem. Int. Ed. Engl., 57, 2018
5Y72
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BU of 5y72 by Molmil
DMSPP Bound AmbP3
分子名称: AmbP3, DIMETHYLALLYL S-THIOLODIPHOSPHATE
著者Wong, C.P, Awakawa, T, Nakashima, Y.
登録日2017-08-16
公開日2018-07-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Two Distinct Substrate Binding Modes for the Normal and Reverse Prenylation of Hapalindoles by the Prenyltransferase AmbP3
Angew. Chem. Int. Ed. Engl., 57, 2018
5Y84
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BU of 5y84 by Molmil
Hapalindole U and DMSPP Bound AmbP3
分子名称: AmbP3, DIMETHYLALLYL S-THIOLODIPHOSPHATE, Hapalindole U
著者Wong, C.P, Awakawa, T, Nakashima, Y.
登録日2017-08-18
公開日2018-07-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Two Distinct Substrate Binding Modes for the Normal and Reverse Prenylation of Hapalindoles by the Prenyltransferase AmbP3
Angew. Chem. Int. Ed. Engl., 57, 2018
5Y7C
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BU of 5y7c by Molmil
Hapalindole A and DMSPP Bound AmbP3
分子名称: AmbP3, DIMETHYLALLYL S-THIOLODIPHOSPHATE, Hapalindole A
著者Wong, C.P, Awakawa, T, Nakashima, Y.
登録日2017-08-16
公開日2018-07-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.003 Å)
主引用文献Two Distinct Substrate Binding Modes for the Normal and Reverse Prenylation of Hapalindoles by the Prenyltransferase AmbP3
Angew. Chem. Int. Ed. Engl., 57, 2018
7BVR
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BU of 7bvr by Molmil
DgpB-DgpC complex apo
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, AP_endonuc_2 domain-containing protein, DgpB, ...
著者Mori, T, He, H, Abe, I.
登録日2020-04-11
公開日2021-04-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献C-Glycoside metabolism in the gut and in nature: Identification, characterization, structural analyses and distribution of C-C bond-cleaving enzymes.
Nat Commun, 12, 2021
7BVS
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BU of 7bvs by Molmil
DfgA-DfgB complex apo
分子名称: DfgB, GLYCEROL, MANGANESE (II) ION, ...
著者Mori, T, He, H, Abe, I.
登録日2020-04-11
公開日2021-04-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献C-Glycoside metabolism in the gut and in nature: Identification, characterization, structural analyses and distribution of C-C bond-cleaving enzymes.
Nat Commun, 12, 2021
5GK0
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BU of 5gk0 by Molmil
Crystal structure of selnomethionin-labeled ketosynthase StlD
分子名称: Ketosynthase StlD
著者Mori, T, Saito, Y, Morita, H, Abe, I.
登録日2016-07-03
公開日2017-07-05
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.331 Å)
主引用文献Structural Insight into the Enzymatic Formation of Bacterial Stilbene.
Cell Chem Biol, 23, 2016
5GK1
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BU of 5gk1 by Molmil
Crystal structure of the ketosynthase StlD complexed with substrate
分子名称: 3-OXO-5-METHYLHEXANOIC ACID, Ketosynthase StlD
著者Mori, T, Saito, Y, Morita, H, Abe, I.
登録日2016-07-03
公開日2017-07-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Structural Insight into the Enzymatic Formation of Bacterial Stilbene.
Cell Chem Biol, 23, 2016
5GK2
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BU of 5gk2 by Molmil
The structure of the H302A mutant of StlD
分子名称: Ketosynthase StlD
著者Mori, T, Dngfeng, Y, Morita, H, Abe, I.
登録日2016-07-03
公開日2017-07-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.201 Å)
主引用文献Structural Insight into the Enzymatic Formation of Bacterial Stilbene.
Cell Chem Biol, 23, 2016
4YZJ
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BU of 4yzj by Molmil
Crystal structure of selnomethionin-labeled indole prenyltransferase TleC
分子名称: Tryptophan dimethylallyltransferase
著者Mori, T, Matsui, T, Morita, H, Abe, I.
登録日2015-03-25
公開日2016-03-16
最終更新日2020-02-05
実験手法X-RAY DIFFRACTION (2.106 Å)
主引用文献Manipulation of prenylation reactions by structure-based engineering of bacterial indolactam prenyltransferases.
Nat Commun, 7, 2016
4Y1B
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BU of 4y1b by Molmil
Structure of crotonyl-CoA carboxylase/reductase AntE V350A in complex with NADP
分子名称: AntE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Abe, I, Zhang, L, Mori, T.
登録日2015-02-07
公開日2015-09-23
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Rational Control of Polyketide Extender Units by Structure-Based Engineering of a Crotonyl-CoA Carboxylase/Reductase in Antimycin Biosynthesis
Angew.Chem.Int.Ed.Engl., 54, 2015
4YLA
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BU of 4yla by Molmil
Crystal structure of the indole prenyltransferase MpnD complexed with indolactam V and DMSPP
分子名称: (2S,5S)-5-(hydroxymethyl)-1-methyl-2-(propan-2-yl)-1,2,4,5,6,8-hexahydro-3H-[1,4]diazonino[7,6,5-cd]indol-3-one, Aromatic prenyltransferase, DIMETHYLALLYL S-THIOLODIPHOSPHATE, ...
著者Mori, T, Morita, H, Abe, I.
登録日2015-03-05
公開日2016-03-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Manipulation of prenylation reactions by structure-based engineering of bacterial indolactam prenyltransferases.
Nat Commun, 7, 2016
4YZL
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BU of 4yzl by Molmil
Crystal structure of the indole prenyltransferase TleC complexed with indolactam V and DMSPP
分子名称: (2S,5S)-5-(hydroxymethyl)-1-methyl-2-(propan-2-yl)-1,2,4,5,6,8-hexahydro-3H-[1,4]diazonino[7,6,5-cd]indol-3-one, DIMETHYLALLYL S-THIOLODIPHOSPHATE, Tryptophan dimethylallyltransferase
著者Mori, T, Morita, H, Abe, I.
登録日2015-03-25
公開日2016-03-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.096 Å)
主引用文献Manipulation of prenylation reactions by structure-based engineering of bacterial indolactam prenyltransferases.
Nat Commun, 7, 2016
4YL7
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BU of 4yl7 by Molmil
Crystal structure of the indole prenyltransferase MpnD from Marinactinospora thermotolerans
分子名称: Aromatic prenyltransferase
著者Mori, T, Morita, H, Abe, I.
登録日2015-03-05
公開日2016-03-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.601 Å)
主引用文献Manipulation of prenylation reactions by structure-based engineering of bacterial indolactam prenyltransferases.
Nat Commun, 7, 2016
4YZK
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BU of 4yzk by Molmil
Crystal structure of the indole prenyltransferase TleC apo structure
分子名称: Tryptophan dimethylallyltransferase
著者Mori, T, Morita, H, Abe, I.
登録日2015-03-25
公開日2016-03-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Manipulation of prenylation reactions by structure-based engineering of bacterial indolactam prenyltransferases.
Nat Commun, 7, 2016

 

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