2Z23
| Crystal structure of Y.pestis oligo peptide binding protein OppA with tri-lysine ligand | 分子名称: | Periplasmic oligopeptide-binding protein, peptide (LYS)(LYS)(LYS) | 著者 | Tanabe, M, Bertland, T, Mirza, O, Byrne, B, Brown, K.A. | 登録日 | 2007-05-17 | 公開日 | 2007-10-30 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Structures of OppA and PstS from Yersinia pestis indicate variability of interactions with transmembrane domains. Acta Crystallogr.,Sect.D, 63, 2007
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2Z22
| Crystal structure of phosphate preplasmic binding protein psts from yersinia pestis | 分子名称: | PHOSPHATE ION, Periplasmic phosphate-binding protein | 著者 | Tanabe, M, Byrne, B, Brown, K.A, Mirza, O, Bertland, T. | 登録日 | 2007-05-17 | 公開日 | 2007-10-30 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Structures of OppA and PstS from Yersinia pestis indicate variability of interactions with transmembrane domains. Acta Crystallogr.,Sect.D, 63, 2007
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3A2S
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3VZT
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3VZW
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3VZU
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5GSL
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5GSM
| Glycoside hydrolase B with product | 分子名称: | 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-amino-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ... | 著者 | Watanabe, M, Kamachi, S, Mine, S. | 登録日 | 2016-08-16 | 公開日 | 2017-02-01 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (1.27 Å) | 主引用文献 | Glycoside hydrolase B with product To Be Published
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5HXV
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5B5S
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7CFO
| Crystal structure of human RXRalpha ligand binding domain complexed with CBTF-EE. | 分子名称: | 1-[3-(2-ethoxyethoxy)-5,5,8,8-tetramethyl-6,7-dihydronaphthalen-2-yl]-2-(trifluoromethyl)benzimidazole-5-carboxylic acid, GLYCEROL, Retinoic acid receptor RXR-alpha | 著者 | Watanabe, M, Fujihara, M, Motoyama, T, Kawasaki, M, Yamada, S, Takamura, Y, Ito, S, Makishima, M, Nakano, S, Kakuta, H. | 登録日 | 2020-06-27 | 公開日 | 2021-01-06 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.15 Å) | 主引用文献 | Discovery of a "Gatekeeper" Antagonist that Blocks Entry Pathway to Retinoid X Receptors (RXRs) without Allosteric Ligand Inhibition in Permissive RXR Heterodimers. J.Med.Chem., 64, 2021
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2ZP8
| The Nature of the TRAP:Anti-TRAP complex | 分子名称: | TRYPTOPHAN, Transcription attenuation protein mtrB, Tryptophan RNA-binding attenuator protein-inhibitory protein, ... | 著者 | Watanabe, M, Heddle, J.G, Unzai, S, Akashi, S, Park, S.Y, Tame, J.R.H. | 登録日 | 2008-07-08 | 公開日 | 2009-02-03 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (3.2 Å) | 主引用文献 | The nature of the TRAP-Anti-TRAP complex. Proc.Natl.Acad.Sci.USA, 106, 2009
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2ZCZ
| Crystal structures and thermostability of mutant TRAP3 A7 (ENGINEERED TRAP) | 分子名称: | TRYPTOPHAN, Transcription attenuation protein mtrB | 著者 | Watanabe, M, Mishima, Y, Yamashita, I, Park, S.Y, Tame, J.R.H, Heddle, J.G. | 登録日 | 2007-11-15 | 公開日 | 2008-04-29 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Intersubunit linker length as a modifier of protein stability: crystal structures and thermostability of mutant TRAP. Protein Sci., 17, 2008
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2ZD0
| Crystal structures and thermostability of mutant TRAP3 A5 (ENGINEERED TRAP) | 分子名称: | TRYPTOPHAN, Transcription attenuation protein mtrB | 著者 | Watanabe, M, Mishima, Y, Yamashita, I, Park, S.Y, Tame, J.R.H, Heddle, J.G. | 登録日 | 2007-11-15 | 公開日 | 2008-04-29 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | 主引用文献 | Intersubunit linker length as a modifier of protein stability: crystal structures and thermostability of mutant TRAP. Protein Sci., 17, 2008
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2ZP9
| The Nature of the TRAP:Anti-TRAP complex | 分子名称: | TRYPTOPHAN, Transcription attenuation protein mtrB, Tryptophan RNA-binding attenuator protein-inhibitory protein, ... | 著者 | Watanabe, M, Heddle, J.G, Unzai, S, Akashi, S, Park, S.Y, Tame, J.R.H. | 登録日 | 2008-07-08 | 公開日 | 2009-02-03 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (3.2 Å) | 主引用文献 | The nature of the TRAP-Anti-TRAP complex. Proc.Natl.Acad.Sci.USA, 106, 2009
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7DE8
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5XGZ
| Metagenomic glucose-tolerant glycosidase | 分子名称: | Beta-glycosidase, GLYCEROL, NICKEL (II) ION, ... | 著者 | Watanabe, M, Matsuzawa, T, Yaoi, K. | 登録日 | 2017-04-19 | 公開日 | 2018-05-02 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (1.75 Å) | 主引用文献 | Improved thermostability of a metagenomic glucose-tolerant beta-glycosidase based on its X-ray crystal structure. Appl.Microbiol.Biotechnol., 101, 2017
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7WDO
| Crystal structures of MeBglD2 in complex with various saccharides | 分子名称: | Beta-glucosidase, SULFATE ION, beta-D-glucopyranose, ... | 著者 | Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K. | 登録日 | 2021-12-22 | 公開日 | 2022-11-02 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.21 Å) | 主引用文献 | Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides Appl.Microbiol.Biotechnol., 106, 2022
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7WDR
| Crystal structures of MeBglD2 in complex with various saccharides | 分子名称: | 4-nitrophenyl beta-D-glucopyranoside, Beta-glucosidase, SULFATE ION | 著者 | Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K. | 登録日 | 2021-12-22 | 公開日 | 2022-11-02 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides Appl.Microbiol.Biotechnol., 106, 2022
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7WDP
| Crystal structures of MeBglD2 in complex with various saccharides | 分子名称: | Beta-glucosidase, SULFATE ION, alpha-D-glucopyranose, ... | 著者 | Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K. | 登録日 | 2021-12-22 | 公開日 | 2022-11-02 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (2.39 Å) | 主引用文献 | Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides Appl.Microbiol.Biotechnol., 106, 2022
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7WDS
| Crystal structures of MeBglD2 in complex with various saccharides | 分子名称: | Beta-glucosidase, SULFATE ION, beta-D-xylopyranose | 著者 | Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K. | 登録日 | 2021-12-22 | 公開日 | 2022-11-02 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.68 Å) | 主引用文献 | Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides Appl.Microbiol.Biotechnol., 106, 2022
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7WDV
| Crystal structures of MeBglD2 in complex with various saccharides | 分子名称: | Beta-glucosidase, SULFATE ION, beta-D-glucopyranose, ... | 著者 | Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K. | 登録日 | 2021-12-22 | 公開日 | 2022-11-02 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.812 Å) | 主引用文献 | Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides Appl.Microbiol.Biotechnol., 106, 2022
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7WDN
| Crystal structures of MeBglD2 in complex with various saccharides | 分子名称: | alpha-D-glucopyranose, beta-glucosidase | 著者 | Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K. | 登録日 | 2021-12-22 | 公開日 | 2023-01-04 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides. Appl.Microbiol.Biotechnol., 106, 2022
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3VU3
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6GV1
| Crystal structure of E.coli Multidrug/H+ antiporter MdfA in outward open conformation with bound Fab fragment | 分子名称: | Fab fragment YN1074 heavy chain, Fab fragment YN1074 light chain, Major Facilitator Superfamily multidrug/H+ antiporter MdfA from E.coli, ... | 著者 | Nagarathinam, K, Parthier, C, Stubbs, M.T, Tanabe, M. | 登録日 | 2018-06-20 | 公開日 | 2018-10-03 | 最終更新日 | 2024-10-09 | 実験手法 | X-RAY DIFFRACTION (3.4 Å) | 主引用文献 | Outward open conformation of a Major Facilitator Superfamily multidrug/H+antiporter provides insights into switching mechanism. Nat Commun, 9, 2018
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