Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
3M6Z
DownloadVisualize
BU of 3m6z by Molmil
Crystal structure of an N-terminal 44 kDa fragment of topoisomerase V in the presence of guanidium hydrochloride
分子名称: CHLORIDE ION, GUANIDINE, MAGNESIUM ION, ...
著者Rajan, R, Taneja, B, Mondragon, A.
登録日2010-03-16
公開日2010-08-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structures of minimal catalytic fragments of topoisomerase v reveals conformational changes relevant for DNA binding.
Structure, 18, 2010
4GFJ
DownloadVisualize
BU of 4gfj by Molmil
Crystal structure of Topo-78, an N-terminal 78kDa fragment of topoisomerase V
分子名称: GLYCEROL, Topoisomerase V, ZINC ION
著者Rajan, R, Prasad, R, Taneja, B, Wilson, S.H, Mondragon, A.
登録日2012-08-03
公開日2012-12-05
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Identification of one of the apurinic/apyrimidinic lyase active sites of topoisomerase V by structural and functional studies.
Nucleic Acids Res., 41, 2013
3M7D
DownloadVisualize
BU of 3m7d by Molmil
Crystal structure of an N-terminal 44 kDA fragment of topoisomerase V in the presence of dioxane
分子名称: Topoisomerase V
著者Rajan, R, Taneja, B, Mondragon, A.
登録日2010-03-16
公開日2010-08-04
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.815 Å)
主引用文献Structures of minimal catalytic fragments of topoisomerase v reveals conformational changes relevant for DNA binding.
Structure, 18, 2010
3M7G
DownloadVisualize
BU of 3m7g by Molmil
Structure of topoisomerase domain of topoisomerase V protein
分子名称: Topoisomerase V
著者Rajan, R, Taneja, B, Mondragon, A.
登録日2010-03-16
公開日2010-08-04
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structures of minimal catalytic fragments of topoisomerase v reveals conformational changes relevant for DNA binding.
Structure, 18, 2010
3M6K
DownloadVisualize
BU of 3m6k by Molmil
Crystal Structure of N-terminal 44 kDa fragment of topoisomerase V in the presence of guanidium hydrochloride
分子名称: PHOSPHATE ION, Topoisomerase V
著者Rajan, R, Taneja, B, Mondragon, A.
登録日2010-03-15
公開日2010-08-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structures of minimal catalytic fragments of topoisomerase v reveals conformational changes relevant for DNA binding.
Structure, 18, 2010
1YCL
DownloadVisualize
BU of 1ycl by Molmil
Crystal Structure of B. subtilis LuxS in Complex with a Catalytic 2-Ketone Intermediate
分子名称: (S)-2-AMINO-4-[(2S,3R)-2,3,5-TRIHYDROXY-4-OXO-PENTYL]MERCAPTO-BUTYRIC ACID, COBALT (II) ION, S-ribosylhomocysteinase, ...
著者Rajan, R, Zhu, J, Hu, X, Pei, D, Bell, C.E.
登録日2004-12-22
公開日2005-03-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of S-Ribosylhomocysteinase (LuxS) in Complex with a Catalytic 2-Ketone Intermediate.
Biochemistry, 44, 2005
5HM5
DownloadVisualize
BU of 5hm5 by Molmil
Crystal structure of Topo-97, an N-terminal 97kDa fragment of topoisomerase V
分子名称: Topoisomerase V
著者Rajan, R, Osterman, A, Mondragon, A.
登録日2016-01-15
公開日2016-03-09
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Methanopyrus kandleri topoisomerase V contains three distinct AP lyase active sites in addition to the topoisomerase active site.
Nucleic Acids Res., 44, 2016
1RBI
DownloadVisualize
BU of 1rbi by Molmil
CRYSTALLOGRAPHIC STRUCTURES OF RIBONUCLEASE S VARIANTS WITH NONPOLAR SUBSTITUTION AT POSITION 13: PACKING AND CAVITIES
分子名称: RIBONUCLEASE S (S-PEPTIDE), RIBONUCLEASE S (S-PROTEIN), SULFATE ION
著者Varadarajan, R, Richards, F.M.
登録日1992-06-12
公開日1993-10-31
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystallographic structures of ribonuclease S variants with nonpolar substitution at position 13: packing and cavities.
Biochemistry, 31, 1992
1RBF
DownloadVisualize
BU of 1rbf by Molmil
CRYSTALLOGRAPHIC STRUCTURES OF RIBONUCLEASE S VARIANTS WITH NONPOLAR SUBSTITUTION AT POSITION 13: PACKING AND CAVITIES
分子名称: RIBONUCLEASE S (S-PEPTIDE), RIBONUCLEASE S (S-PROTEIN), SULFATE ION
著者Varadarajan, R, Richards, F.M.
登録日1992-06-12
公開日1993-10-31
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystallographic structures of ribonuclease S variants with nonpolar substitution at position 13: packing and cavities.
Biochemistry, 31, 1992
1RBC
DownloadVisualize
BU of 1rbc by Molmil
CRYSTALLOGRAPHIC STRUCTURES OF RIBONUCLEASE S VARIANTS WITH NONPOLAR SUBSTITUTION AT POSITION 13: PACKING AND CAVITIES
分子名称: RIBONUCLEASE S (S-PEPTIDE), RIBONUCLEASE S (S-PROTEIN), SULFATE ION
著者Varadarajan, R, Richards, F.M.
登録日1992-06-12
公開日1993-10-31
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystallographic structures of ribonuclease S variants with nonpolar substitution at position 13: packing and cavities.
Biochemistry, 31, 1992
1RBG
DownloadVisualize
BU of 1rbg by Molmil
CRYSTALLOGRAPHIC STRUCTURES OF RIBONUCLEASE S VARIANTS WITH NONPOLAR SUBSTITUTION AT POSITION 13: PACKING AND CAVITIES
分子名称: RIBONUCLEASE S (S-PEPTIDE), RIBONUCLEASE S (S-PROTEIN), SULFATE ION
著者Varadarajan, R, Richards, F.M.
登録日1992-06-12
公開日1993-10-31
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystallographic structures of ribonuclease S variants with nonpolar substitution at position 13: packing and cavities.
Biochemistry, 31, 1992
1RBE
DownloadVisualize
BU of 1rbe by Molmil
CRYSTALLOGRAPHIC STRUCTURES OF RIBONUCLEASE S VARIANTS WITH NONPOLAR SUBSTITUTION AT POSITION 13: PACKING AND CAVITIES
分子名称: RIBONUCLEASE S (S-PEPTIDE), RIBONUCLEASE S (S-PROTEIN), SULFATE ION
著者Varadarajan, R, Richards, F.M.
登録日1992-06-12
公開日1993-10-31
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystallographic structures of ribonuclease S variants with nonpolar substitution at position 13: packing and cavities.
Biochemistry, 31, 1992
1RBH
DownloadVisualize
BU of 1rbh by Molmil
CRYSTALLOGRAPHIC STRUCTURES OF RIBONUCLEASE S VARIANTS WITH NONPOLAR SUBSTITUTION AT POSITION 13: PACKING AND CAVITIES
分子名称: RIBONUCLEASE S (S-PEPTIDE), RIBONUCLEASE S (S-PROTEIN), SULFATE ION
著者Varadarajan, R, Richards, F.M.
登録日1992-06-12
公開日1993-10-31
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystallographic structures of ribonuclease S variants with nonpolar substitution at position 13: packing and cavities.
Biochemistry, 31, 1992
1RBD
DownloadVisualize
BU of 1rbd by Molmil
CRYSTALLOGRAPHIC STRUCTURES OF RIBONUCLEASE S VARIANTS WITH NONPOLAR SUBSTITUTION AT POSITION 13: PACKING AND CAVITIES
分子名称: RIBONUCLEASE S (S-PEPTIDE), RIBONUCLEASE S (S-PROTEIN), SULFATE ION
著者Varadarajan, R, Richards, F.M.
登録日1992-06-12
公開日1993-10-31
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystallographic structures of ribonuclease S variants with nonpolar substitution at position 13: packing and cavities.
Biochemistry, 31, 1992
1XP8
DownloadVisualize
BU of 1xp8 by Molmil
Deinococcus radiodurans RecA in complex with ATP-gamma-S
分子名称: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, RecA protein
著者Bell, C.E, Rajan, R.
登録日2004-10-08
公開日2004-12-21
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of RecA from Deinococcus radiodurans: insights into the structural basis of extreme radioresistance.
J.Mol.Biol., 344, 2004
6IEP
DownloadVisualize
BU of 6iep by Molmil
GAPDH of Streptococcus agalactiae
分子名称: Glyceraldehyde-3-phosphate dehydrogenase
著者Ponnuraj, K, Nagarajan, R.
登録日2018-09-15
公開日2019-01-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of GAPDH of Streptococcus agalactiae and characterization of its interaction with extracellular matrix molecules
Microb. Pathog., 127, 2018
5FCE
DownloadVisualize
BU of 5fce by Molmil
The crystal structure of the ligand binding region of Serine-glutamate repeat protein A (SgrA) of Enterococcus faecium
分子名称: LPXTG family cell surface protein Fms2
著者Ponnuraj, K, Nagarajan, R.
登録日2015-12-15
公開日2016-07-06
最終更新日2017-12-06
実験手法X-RAY DIFFRACTION (1.798 Å)
主引用文献The crystal structure of the ligand-binding region of serine-glutamate repeat containing protein A (SgrA) of Enterococcus faecium reveals a new protein fold: functional characterization and insights into its adhesion function.
FEBS J., 283, 2016
2FQO
DownloadVisualize
BU of 2fqo by Molmil
Crystal structure of B. subtilis LuxS in complex with (2S)-2-Amino-4-[(2R,3R)-2,3-dihydroxy-3-N- hydroxycarbamoyl-propylmercapto]butyric acid
分子名称: (2S)-2-AMINO-4-[(2R,3R)-2,3-DIHYDROXY-3-N-HYDROXYCARBAMOYL-PROPYLMERCAPTO]BUTYRIC ACID, COBALT (II) ION, S-ribosylhomocysteine lyase, ...
著者Shen, G, Rajan, R, Zhu, J, Bell, C.E, Pei, D.
登録日2006-01-18
公開日2006-05-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Design and Synthesis of Substrate and Intermediate Analogue Inhibitors of S-Ribosylhomocysteinase
J.Med.Chem., 49, 2006
2FQT
DownloadVisualize
BU of 2fqt by Molmil
Crystal structure of B.subtilis LuxS in complex with (2S)-2-Amino-4-[(2R,3S)-2,3-dihydroxy-3-N-hydroxycarbamoyl-propylmercapto]butyric acid
分子名称: (2S)-2-AMINO-4-[(2R,3S)-2,3-DIHYDROXY-3-N-HYDROXYCARBAMOYL-PROPYLMERCAPTO]BUTYRIC ACID, COBALT (II) ION, S-ribosylhomocysteine lyase, ...
著者Shen, G, Rajan, R, Zhu, J, Bell, C.E, Pei, D.
登録日2006-01-18
公開日2006-05-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Design and Synthesis of Substrate Analogue Inhibitors of S-Ribosylhomocysteinase (LuxS)
J.Med.Chem., 49, 2006
2RLN
DownloadVisualize
BU of 2rln by Molmil
THERMODYNAMIC AND STRUCTURAL CONSEQUENCES OF CHANGING A SULPHUR ATOM TO A METHYLENE GROUP IN THE M13NLE MUTATION IN RIBONUCLEASE S
分子名称: RIBONUCLEASE, RIBONUCLEASE S (S-PROTEIN), SULFATE ION
著者Ratnaparkhi, G, Varadarajan, R.
登録日1994-07-11
公開日1994-11-01
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Thermodynamic and structural consequences of changing a sulfur atom to a methylene group in the M13Nle mutation in ribonuclease-S.
Biochemistry, 33, 1994
1D5D
DownloadVisualize
BU of 1d5d by Molmil
The role of phenylalanine 8 in the stabilization of the s protein-s peptide interaction: packing and cavities
分子名称: RNASE S, S PEPTIDE, SULFATE ION
著者Ratnaparkhi, G.S, Varadarajan, R.
登録日1999-10-07
公開日1999-10-20
最終更新日2018-03-14
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Thermodynamic and structural studies of cavity formation in proteins suggest that loss of packing interactions rather than the hydrophobic effect dominates the observed energetics.
Biochemistry, 39, 2000
1D5H
DownloadVisualize
BU of 1d5h by Molmil
Rnase s(f8a). mutant ribonucleasE S.
分子名称: RNASE S, S PEPTIDE, SULFATE ION
著者Ratnaparkhi, G.S, Varadarajan, R.
登録日1999-10-07
公開日1999-10-20
最終更新日2018-03-14
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Thermodynamic and structural studies of cavity formation in proteins suggest that loss of packing interactions rather than the hydrophobic effect dominates the observed energetics.
Biochemistry, 39, 2000
1SGU
DownloadVisualize
BU of 1sgu by Molmil
Comparing the Accumulation of Active Site and Non-active Site Mutations in the HIV-1 Protease
分子名称: N-[2(R)-HYDROXY-1(S)-INDANYL]-5-[(2(S)-TERTIARY BUTYLAMINOCARBONYL)-4(3-PYRIDYLMETHYL)PIPERAZINO]-4(S)-HYDROXY-2(R)-PHENYLMETHYLPENTANAMIDE, POL polyprotein
著者Clemente, J.C, Moose, R.E, Hemrajani, R, Govindasamy, L, Reutzel, R, Mckenna, R, Abandje-McKenna, M, Goodenow, M.M, Dunn, B.M.
登録日2004-02-24
公開日2004-10-05
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Comparing the Accumulation of Active- and Nonactive-Site Mutations in the HIV-1 Protease.
Biochemistry, 43, 2004
1SH9
DownloadVisualize
BU of 1sh9 by Molmil
Comparing the Accumulation of Active Site and Non-active Site Mutations in the HIV-1 Protease
分子名称: POL polyprotein, RITONAVIR
著者Clemente, J.C, Moose, R.E, Hemrajani, R, Govindasamy, L, Reutzel, R, McKenna, R, Abanje-McKenna, M, Goodenow, M.M, Dunn, B.M.
登録日2004-02-25
公開日2004-10-05
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Comparing the Accumulation of Active- and Nonactive-Site Mutations in the HIV-1 Protease.
Biochemistry, 43, 2004
1D5E
DownloadVisualize
BU of 1d5e by Molmil
The role of phenylalanine 8 in the stabilization of the S protein-S peptide interaction: Packing and cavities
分子名称: RNASE S, S PEPTIDE, SULFATE ION
著者Ratnaparkhi, G.S, Varadarajan, R.
登録日1999-10-07
公開日1999-10-20
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Thermodynamic and structural studies of cavity formation in proteins suggest that loss of packing interactions rather than the hydrophobic effect dominates the observed energetics.
Biochemistry, 39, 2000

 

123>

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon