Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7QYF
DownloadVisualize
BU of 7qyf by Molmil
Structure of the transaminase PluriZyme variant (TR2E2)
分子名称: Aminotransferase TR2
著者Roda, S, Fernandez-Lopez, L, Benedens, M, Bollinger, A, Thies, S, Schumacher, J, Coscolin, C, Kazemi, M, Santiago, G, Gertzen, C.G, Gonzalez-Alfonso, J, Plou, F.J, Jaeger, K.E, Smits, S.H, Ferrer, M, Guallar, V.
登録日2022-01-28
公開日2023-07-26
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献A Plurizyme with Transaminase and Hydrolase Activity Catalyzes Cascade Reactions.
Angew Chem Int Ed Engl, 61, 2022
7QQB
DownloadVisualize
BU of 7qqb by Molmil
Crystal structure of the envelope glycoprotein complex of Puumala virus in complex with the scFv fragment of the broadly neutralizing human antibody ADI-42898
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope polyprotein, GLYCEROL, ...
著者Serris, A, Rey, F.A, Guardado-Calvo, P.
登録日2022-01-07
公開日2023-06-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural and mechanistic basis of neutralization by a pan-hantavirus protective antibody.
Sci Transl Med, 15, 2023
7QX3
DownloadVisualize
BU of 7qx3 by Molmil
Structure of the transaminase TR2E2 with EOS
分子名称: 2-azanylethyl hydrogen sulfate, Aminotransferase TR2
著者Roda, S, Fernandez-Lopez, L, Benedens, M, Bollinger, A, Thies, S, Schumacher, J, Coscolin, C, Kazemi, M, Santiago, G, Gertzen, C.G, Gonzalez-Alfonso, J, Plou, F.J, Jaeger, K.E, Smits, S.H, Ferrer, M, Guallar, V.
登録日2022-01-26
公開日2023-08-16
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献A Plurizyme with Transaminase and Hydrolase Activity Catalyzes Cascade Reactions.
Angew.Chem.Int.Ed.Engl., 61, 2022
7QX0
DownloadVisualize
BU of 7qx0 by Molmil
Transaminase Structure of Plurienzyme (Tr2E2) in complex with PLP
分子名称: Aminotransferase TR2, PYRIDOXAL-5'-PHOSPHATE
著者Roda, S, Fernandez-Lopez, L, Benedens, M, Bollinger, A, Thies, S, Schumacher, J, Coscolin, C, Kazemi, M, Santiago, G, Gertzen, C.G, Gonzalez-Alfonso, J, Plou, F.J, Jaeger, K.E, Smits, S.H, Ferrer, M, Guallar, V.
登録日2022-01-26
公開日2023-08-16
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献A Plurizyme with Transaminase and Hydrolase Activity Catalyzes Cascade Reactions.
Angew Chem Int Ed Engl, 61, 2022
7QYG
DownloadVisualize
BU of 7qyg by Molmil
Structure of the transaminase TR2
分子名称: Aminotransferase TR2
著者Roda, S, Fernandez-Lopez, L, Benedens, M, Bollinger, A, Thies, S, Schumacher, J, Coscolin, C, Kazemi, M, Santiago, G, Gertzen, C.G, Gonzalez-Alfonso, J, Plou, F.J, Jaeger, K.E, Smits, S.H, Ferrer, M, Guallar, V.
登録日2022-01-28
公開日2023-08-16
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献A Plurizyme with Transaminase and Hydrolase Activity Catalyzes Cascade Reactions.
Angew Chem Int Ed Engl, 61, 2022
7RAY
DownloadVisualize
BU of 7ray by Molmil
Crystal structure of MBD2 with DNA
分子名称: DNA (5'-D(*GP*CP*CP*AP*A)-R(P*(5MC))-D(P*GP*TP*TP*GP*GP*C)-3'), Methyl-CpG-binding domain protein 2, UNKNOWN ATOM OR ION
著者Liu, K, Dong, A, Loppnau, P, Edwards, A.M, Arrowsmith, C.H, Min, J, Structural Genomics Consortium (SGC)
登録日2021-07-05
公開日2021-07-21
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Crystal structure of MBD2 with DNA
To Be Published
4U2A
DownloadVisualize
BU of 4u2a by Molmil
Structure of a lectin from the seeds of Vatairea macrocarpa complexed with GalNAc
分子名称: 2-acetamido-2-deoxy-alpha-D-galactopyranose, CALCIUM ION, CITRIC ACID, ...
著者Sousa, B.L, Silva-Filho, J.C, Kumar, P, Lyskowski, A, Bezerra, G.A, Delatorre, P, Rocha, B.A.M, Nagano, C.S, Gruber, K, Cavada, B.S.
登録日2014-07-16
公開日2014-12-31
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献High-resolution structure of a new Tn antigen-binding lectin from Vatairea macrocarpa and a comparative analysis of Tn-binding legume lectins.
Int.J.Biochem.Cell Biol., 59C, 2014
8DV3
DownloadVisualize
BU of 8dv3 by Molmil
Crystal structure of human CD1b presenting Phosphatidylinositol C34:1
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOINOSITOL, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Farquhar, R, Rossjohn, J, Shahine, A.
登録日2022-07-28
公開日2023-04-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献alpha beta T-cell receptor recognition of self-phosphatidylinositol presented by CD1b.
J.Biol.Chem., 299, 2023
7RSF
DownloadVisualize
BU of 7rsf by Molmil
Acetylornithine deacetylase from Escherichia coli
分子名称: Acetylornithine deacetylase, CHLORIDE ION, GLYCEROL, ...
著者Osipiuk, J, Endres, M, Becker, D.P, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2021-08-11
公開日2021-08-18
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献Acetylornithine deacetylase from Escherichia coli
To Be Published
8DV4
DownloadVisualize
BU of 8dv4 by Molmil
Crystal structure of the BC8B TCR-CD1b-PI complex
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOINOSITOL, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Farquhar, R, Rossjohn, J, Shahine, A.
登録日2022-07-28
公開日2023-04-19
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献alpha beta T-cell receptor recognition of self-phosphatidylinositol presented by CD1b.
J.Biol.Chem., 299, 2023
4TVH
DownloadVisualize
BU of 4tvh by Molmil
HIV Protease (PR) dimer in closed form with TL-3 in active site and fragment AK-2097 in the outside/top of flap
分子名称: 3-(morpholin-4-ylmethyl)-1H-indole-6-carboxylic acid, BETA-MERCAPTOETHANOL, Protease, ...
著者Tiefenbrunn, T, Kislukhin, A, Finn, M.G, Stout, C.D.
登録日2014-06-26
公開日2014-09-17
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.195 Å)
主引用文献Distinguishing Binders from False Positives by Free Energy Calculations: Fragment Screening Against the Flap Site of HIV Protease.
J.Phys.Chem.B, 119, 2015
8DU5
DownloadVisualize
BU of 8du5 by Molmil
Murine sialidase-1 (NEU1)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Sialidase-1, ...
著者Gorelik, A, Illes, K, Nagar, B.
登録日2022-07-26
公開日2023-05-31
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure of the immunoregulatory sialidase NEU1.
Sci Adv, 9, 2023
7RSK
DownloadVisualize
BU of 7rsk by Molmil
The crystal structure from microfluidic crystals of glycosyl hydrolase family 2 (GH2) member from Bacteroides cellulosilyticus
分子名称: Glycosyl hydrolase family 2, sugar binding domain protein
著者Kim, Y, Nocek, B, Endres, M, Joachimiak, G, Johnson, J, Babnigg, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2021-08-11
公開日2021-08-25
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The crystal structure from microfluidic crystals of glycosyl hydrolase family 2 (GH2) member from Bacteroides cellulosilyticus
To Be Published
7RT0
DownloadVisualize
BU of 7rt0 by Molmil
1.80 A resolution structure of MAO from P. nicotinovorans in complex with FAD
分子名称: 4-methylaminobutanoate oxidase (methylamine-forming), FLAVIN-ADENINE DINUCLEOTIDE, TETRAETHYLENE GLYCOL
著者Lovell, S, Bowman, A, Battaile, K.P, Deay, D.O.
登録日2021-08-12
公開日2021-08-25
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献To be determined
To be published
8DXB
DownloadVisualize
BU of 8dxb by Molmil
HIV-1 reverse transcriptase/rilpivirine with bound fragment 5-fluoroindole-2-carboxylic acid at the NNRTI Adjacent site
分子名称: 1,2-ETHANEDIOL, 4-{[4-({4-[(E)-2-cyanoethenyl]-2,6-dimethylphenyl}amino)pyrimidin-2-yl]amino}benzonitrile, 5-fluoroindole-2-carboxylic acid, ...
著者Chopra, A, Ruiz, F.X, Bauman, J.D, Arnold, E.
登録日2022-08-02
公開日2023-05-31
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Halo Library, a Tool for Rapid Identification of Ligand Binding Sites on Proteins Using Crystallographic Fragment Screening.
J.Med.Chem., 66, 2023
8DXH
DownloadVisualize
BU of 8dxh by Molmil
HIV-1 reverse transcriptase/rilpivirine with bound fragment 5-fluoroquinazolin-4-ol at W266 site
分子名称: 1,2-ETHANEDIOL, 4-{[4-({4-[(E)-2-cyanoethenyl]-2,6-dimethylphenyl}amino)pyrimidin-2-yl]amino}benzonitrile, 5-fluoranyl-3,4-dihydroquinazolin-4-ol, ...
著者Chopra, A, Ruiz, F.X, Bauman, J.D, Arnold, E.
登録日2022-08-02
公開日2023-05-31
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Halo Library, a Tool for Rapid Identification of Ligand Binding Sites on Proteins Using Crystallographic Fragment Screening.
J.Med.Chem., 66, 2023
8DX8
DownloadVisualize
BU of 8dx8 by Molmil
HIV-1 reverse transcriptase/rilpivirine with bound fragment 2-chloro-6-fluorophenethylamine at the 415 site
分子名称: 1,2-ETHANEDIOL, 2-(2-chloro-6-fluorophenyl)ethan-1-amine, 4-{[4-({4-[(E)-2-cyanoethenyl]-2,6-dimethylphenyl}amino)pyrimidin-2-yl]amino}benzonitrile, ...
著者Chopra, A, Ruiz, F.X, Bauman, J.D, Arnold, E.
登録日2022-08-02
公開日2023-05-31
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Halo Library, a Tool for Rapid Identification of Ligand Binding Sites on Proteins Using Crystallographic Fragment Screening.
J.Med.Chem., 66, 2023
8DXM
DownloadVisualize
BU of 8dxm by Molmil
HIV-1 reverse transcriptase/rilpivirine with bound fragment 4-bromophenol at the Knuckles site
分子名称: 1,2-ETHANEDIOL, 4-BROMOPHENOL, 4-{[4-({4-[(E)-2-cyanoethenyl]-2,6-dimethylphenyl}amino)pyrimidin-2-yl]amino}benzonitrile, ...
著者Chopra, A, Ruiz, F.X, Bauman, J.D, Arnold, E.
登録日2022-08-02
公開日2023-05-31
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Halo Library, a Tool for Rapid Identification of Ligand Binding Sites on Proteins Using Crystallographic Fragment Screening.
J.Med.Chem., 66, 2023
7RAS
DownloadVisualize
BU of 7ras by Molmil
Structure of TRPV3 in complex with osthole
分子名称: 7-methoxy-8-(3-methylbut-2-enyl)chromen-2-one, Transient receptor potential cation channel subfamily V member 3
著者Neuberger, A, Nadezhdin, K.D, Sobolevsky, A.I.
登録日2021-07-02
公開日2021-09-08
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.64 Å)
主引用文献Structural mechanism of TRPV3 channel inhibition by the plant-derived coumarin osthole.
Embo Rep., 22, 2021
7RM5
DownloadVisualize
BU of 7rm5 by Molmil
MicroED structure of the human adenosine receptor at 2.8A
分子名称: 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol, Adenosine receptor A2a/Soluble cytochrome b562 chimera, CHOLESTEROL, ...
著者Martynowycz, M.W, Shiriaeva, A, Ge, X, Hattne, J, Nannenga, B.L, Cherezov, V, Gonen, T.
登録日2021-07-26
公開日2021-09-08
最終更新日2023-10-18
実験手法ELECTRON CRYSTALLOGRAPHY (2.79 Å)
主引用文献MicroED structure of the human adenosine receptor determined from a single nanocrystal in LCP.
Proc.Natl.Acad.Sci.USA, 118, 2021
8DPY
DownloadVisualize
BU of 8dpy by Molmil
Synthetic Beta Sheet Macrocycle Stabilized by Hydrogen Bond Surrogates
分子名称: beta sheet-forming peptide with flexible linker
著者Lu, B, Vecchioni, S, Nazzaro, A, Arora, P.S.
登録日2022-07-18
公開日2023-05-24
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Macrocyclic beta-Sheets Stabilized by Hydrogen Bond Surrogates.
Angew.Chem.Int.Ed.Engl., 62, 2023
7RAU
DownloadVisualize
BU of 7rau by Molmil
Structure of TRPV3 in complex with osthole
分子名称: 7-methoxy-8-(3-methylbut-2-enyl)chromen-2-one, Transient receptor potential cation channel subfamily V member 3
著者Neuberger, A, Nadezhdin, K.D, Sobolevsky, A.I.
登録日2021-07-02
公開日2021-09-08
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.99 Å)
主引用文献Structural mechanism of TRPV3 channel inhibition by the plant-derived coumarin osthole.
Embo Rep., 22, 2021
8DXI
DownloadVisualize
BU of 8dxi by Molmil
HIV-1 reverse transcriptase/rilpivirine with bound fragment [1-(4-fluorophenyl)-5-methyl-1H-pyrazol-4-yl]methanol at multiple sites
分子名称: 1,2-ETHANEDIOL, 4-{[4-({4-[(E)-2-cyanoethenyl]-2,6-dimethylphenyl}amino)pyrimidin-2-yl]amino}benzonitrile, DIMETHYL SULFOXIDE, ...
著者Chopra, A, Ruiz, F.X, Bauman, J.D, Arnold, E.
登録日2022-08-02
公開日2023-05-31
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Halo Library, a Tool for Rapid Identification of Ligand Binding Sites on Proteins Using Crystallographic Fragment Screening.
J.Med.Chem., 66, 2023
8DXK
DownloadVisualize
BU of 8dxk by Molmil
HIV-1 reverse transcriptase/rilpivirine with bound fragment 4-bromopyrazole at multiple sites
分子名称: 1,2-ETHANEDIOL, 4-bromo-1H-pyrazole, 4-{[4-({4-[(E)-2-cyanoethenyl]-2,6-dimethylphenyl}amino)pyrimidin-2-yl]amino}benzonitrile, ...
著者Chopra, A, Ruiz, F.X, Bauman, J.D, Arnold, E.
登録日2022-08-02
公開日2023-05-31
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Halo Library, a Tool for Rapid Identification of Ligand Binding Sites on Proteins Using Crystallographic Fragment Screening.
J.Med.Chem., 66, 2023
7REI
DownloadVisualize
BU of 7rei by Molmil
The crystal structure of nickel bound human ADO C18S C239S variant
分子名称: 2-aminoethanethiol dioxygenase, GLYCEROL, NICKEL (II) ION
著者Wang, Y, Shin, I, Li, J, Liu, A.
登録日2021-07-12
公開日2021-09-15
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Crystal structure of human cysteamine dioxygenase provides a structural rationale for its function as an oxygen sensor.
J.Biol.Chem., 297, 2021

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon