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7Y7F
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BU of 7y7f by Molmil
Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAC)
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T.
登録日2022-06-22
公開日2023-10-25
最終更新日2025-02-12
実験手法ELECTRON MICROSCOPY (2.43 Å)
主引用文献Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth.
Cell, 186, 2023
7Y7E
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BU of 7y7e by Molmil
Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T.
登録日2022-06-22
公開日2023-10-25
最終更新日2025-02-12
実験手法ELECTRON MICROSCOPY (2.41 Å)
主引用文献Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth.
Cell, 186, 2023
7Y7G
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BU of 7y7g by Molmil
Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T.
登録日2022-06-22
公開日2023-10-25
最終更新日2025-02-12
実験手法ELECTRON MICROSCOPY (2.34 Å)
主引用文献Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth.
Cell, 186, 2023
7Y7H
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BU of 7y7h by Molmil
Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAC)
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T.
登録日2022-06-22
公開日2023-10-25
最終更新日2025-02-12
実験手法ELECTRON MICROSCOPY (2.51 Å)
主引用文献Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth.
Cell, 186, 2023
7Y7D
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BU of 7y7d by Molmil
Structure of the Bacterial Ribosome with human tRNA Asp(Q34) and mRNA(GAU)
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T.
登録日2022-06-22
公開日2023-10-25
最終更新日2025-02-12
実験手法ELECTRON MICROSCOPY (2.58 Å)
主引用文献Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth.
Cell, 186, 2023
2ZBR
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BU of 2zbr by Molmil
Crystal structure of ribosomal protein L11 methyltransferase from Thermus thermophilus in complex with S-adenosyl-ornithine
分子名称: Ribosomal protein L11 methyltransferase, SINEFUNGIN
著者Kaminishi, T, Sakai, H, Takemoto-Hori, C, Terada, T, Nakagawa, N, Maoka, N, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-10-26
公開日2008-11-11
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of ribosomal protein L11 methyltransferase from Thermus thermophilus
To be Published
7YNW
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BU of 7ynw by Molmil
Crystal structure of O-(2-nitrobenzyl)-L-tyrosine-tRNA sythetase in complex with O-(2-nitrobenzyl)-L-tyrosine
分子名称: (2~{S})-2-azanyl-3-[4-[(2-nitrophenyl)methoxy]phenyl]propanoic acid, Tyrosine--tRNA ligase
著者Hosaka, T, Shirouzu, M.
登録日2022-08-01
公開日2022-09-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Crystal Structure of an Archaeal Tyrosyl-tRNA Synthetase Bound to Photocaged L-Tyrosine and Its Potential Application to Time-Resolved X-ray Crystallography.
Int J Mol Sci, 23, 2022
7YNU
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BU of 7ynu by Molmil
Crystal structure of Hen Egg white LYSOZYME introduced with O-(2-nitrobenzyl)-L-tyrosine
分子名称: ACETATE ION, CHLORIDE ION, Lysozyme C, ...
著者Hosaka, T, Shirouzu, M.
登録日2022-08-01
公開日2022-09-21
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Crystal Structure of an Archaeal Tyrosyl-tRNA Synthetase Bound to Photocaged L-Tyrosine and Its Potential Application to Time-Resolved X-ray Crystallography.
Int J Mol Sci, 23, 2022
7YNV
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BU of 7ynv by Molmil
Crystal structure of photolysed Hen Egg white LYSOZYME introduced with O-(2-nitrobenzyl)-L-tyrosine
分子名称: ACETATE ION, CHLORIDE ION, Lysozyme C, ...
著者Hosaka, T, Shirouzu, M.
登録日2022-08-01
公開日2022-09-21
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献Crystal Structure of an Archaeal Tyrosyl-tRNA Synthetase Bound to Photocaged L-Tyrosine and Its Potential Application to Time-Resolved X-ray Crystallography.
Int J Mol Sci, 23, 2022
7E3D
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BU of 7e3d by Molmil
Crystal structure of human acetylcholinesterase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, Acetylcholinesterase
著者Dileep, K.V, Ihara, K, Mishima-Tsumagari, C, Kukimoto-Niino, M, Yonemochi, M, Hanada, K, Shirouzu, M, Zhang, K.Y.J.
登録日2021-02-08
公開日2022-02-16
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of human acetylcholinesterase in complex with tacrine: Implications for drug discovery
Int.J.Biol.Macromol., 210, 2022
7E3H
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BU of 7e3h by Molmil
Crystal structure of human acetylcholinesterase in complex with donepezil
分子名称: 1-BENZYL-4-[(5,6-DIMETHOXY-1-INDANON-2-YL)METHYL]PIPERIDINE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholinesterase
著者Dileep, K.V, Ihara, K, Mishima-Tsumagari, C, Kukimoto-Niino, M, Yonemochi, M, Hanada, K, Shirouzu, M, Zhang, K.Y.J.
登録日2021-02-08
公開日2022-02-16
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Crystal structure of human acetylcholinesterase in complex with tacrine: Implications for drug discovery
Int.J.Biol.Macromol., 210, 2022
6KRO
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BU of 6kro by Molmil
Tankyrase-2 in complex with RK-582
分子名称: 6-[(2S,6R)-2,6-dimethylmorpholin-4-yl]-4-fluoranyl-1-methyl-1'-(8-methyl-4-oxidanylidene-3,5,6,7-tetrahydropyrido[2,3-d]pyrimidin-2-yl)spiro[indole-3,4'-piperidine]-2-one, GLYCEROL, PHOSPHATE ION, ...
著者Niwa, H, Shirai, F, Sato, S, Tsumura, T, Okue, M, Shirouzu, M, Seimiya, H, Umehara, T.
登録日2019-08-22
公開日2020-04-01
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Design and Discovery of an Orally Efficacious Spiroindolinone-Based Tankyrase Inhibitor for the Treatment of Colon Cancer.
J.Med.Chem., 63, 2020
1IUG
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BU of 1iug by Molmil
The crystal structure of aspartate aminotransferase which belongs to subgroup IV from Thermus thermophilus
分子名称: PHOSPHATE ION, putative aspartate aminotransferase
著者Katsura, Y, Shirouzu, M, Yamaguchi, H, Ishitani, R, Nureki, O, Kuramitsu, S, Hayashi, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-03-04
公開日2003-11-25
最終更新日2024-12-25
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of a putative aspartate aminotransferase belonging to subgroup IV.
Proteins, 55, 2004
1IUL
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BU of 1iul by Molmil
The structure of cell-free ID.343 from Thermus thermophilus
分子名称: hypothetical protein TT1466
著者Wada, T, Shirouzu, M, Park, S.-Y, Tame, J.R, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-03-05
公開日2003-07-15
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of a conserved CoA-binding protein synthesized by a cell-free system.
Acta Crystallogr.,Sect.D, 59, 2003
1J1V
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BU of 1j1v by Molmil
Crystal structure of DnaA domainIV complexed with DnaAbox DNA
分子名称: 5'-D(*CP*CP*TP*GP*TP*GP*GP*AP*TP*AP*AP*CP*A)-3', 5'-D(*TP*GP*TP*TP*AP*TP*CP*CP*AP*CP*AP*GP*G)-3', Chromosomal replication initiator protein dnaA
著者Fujikawa, N, Kurumizaka, H, Nureki, O, Terada, T, Shirouzu, M, Katayama, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-12-18
公開日2003-04-22
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis of replication origin recognition by the DnaA protein
NUCLEIC ACIDS RES., 31, 2003
5YZA
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BU of 5yza by Molmil
Crystal Structure of Human CRMP-2 with S522D mutation
分子名称: Dihydropyrimidinase-related protein 2
著者Sumi, T, Imasaki, T, Aoki, M, Sakai, N, Nitta, E, Shirouzu, M, Nitta, R.
登録日2017-12-13
公開日2018-03-21
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Insights into the Altering Function of CRMP2 by Phosphorylation.
Cell Struct. Funct., 43, 2018
5YZ5
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BU of 5yz5 by Molmil
Crystal Structure of Human CRMP-2 with T509D-T514D-S518D-S522D mutations
分子名称: Dihydropyrimidinase-related protein 2, SULFATE ION
著者Imasaki, T, Sumi, T, Aoki, M, Sakai, N, Nitta, E, Shirouzu, M, Nitta, R.
登録日2017-12-13
公開日2018-03-21
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Insights into the Altering Function of CRMP2 by Phosphorylation.
Cell Struct. Funct., 43, 2018
6AJ4
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BU of 6aj4 by Molmil
Crystal structure of the DHR-2 domain of DOCK7 in complex with Cdc42
分子名称: Cell division control protein 42 homolog, Dedicator of cytokinesis protein 7
著者Kukimoto-Niino, M, Shirouzu, M.
登録日2018-08-27
公開日2019-03-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.256 Å)
主引用文献Structural Basis for the Dual Substrate Specificity of DOCK7 Guanine Nucleotide Exchange Factor.
Structure, 27, 2019
7DQC
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BU of 7dqc by Molmil
Crystal structure of nucleotide-free mutant A(S23C)3B(N64C)3 complex from Enterococcus hirae V-ATPase
分子名称: GLYCEROL, V-type sodium ATPase catalytic subunit A, V-type sodium ATPase subunit B
著者Maruyama, S, Suzuki, K, Mizutani, K, Imai, F.L, Ishizuka-Katsura, Y, Shirouzu, M, Murata, M.
登録日2020-12-23
公開日2021-12-29
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.706 Å)
主引用文献The combination of high-speed AFM and X-ray crystallography reveals rotary catalytic mechanism of shaftless V1-ATPase
To Be Published
5ZE9
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BU of 5ze9 by Molmil
Crystal structure of AMP-PNP bound mutant A3B3 complex from Enterococcus hirae V-ATPase
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, MAGNESIUM ION, ...
著者Maruyama, S, Suzuki, K, Sasaki, H, Mizutani, K, Saito, Y, Imai, F.L, Ishizuka-Katsura, Y, Shirouzu, M, Ichiro, Y, Murata, T.
登録日2018-02-27
公開日2019-02-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.102 Å)
主引用文献Metastable asymmetrical structure of a shaftless V1motor.
Sci Adv, 5, 2019
5B0U
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BU of 5b0u by Molmil
Crystal structure of the mutated 19 kDa protein of Oplophorus luciferase (nanoKAZ)
分子名称: Oplophorus-luciferin 2-monooxygenase catalytic subunit
著者Tomabechi, Y, Ehara, H, Sekine, S.I, Shirouzu, M.
登録日2015-11-04
公開日2016-01-13
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Crystal structure of nanoKAZ: The mutated 19 kDa component of Oplophorus luciferase catalyzing the bioluminescent reaction with coelenterazine
Biochem.Biophys.Res.Commun., 470, 2016
7CLX
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BU of 7clx by Molmil
Crystal structure of the DOCK8 DHR-1 domain
分子名称: Dedicator of cytokinesis protein 8
著者Kukimoto-Niino, M, Shirouzu, M, Yokoyama, S, Fukui, Y, Uruno, T.
登録日2020-07-22
公開日2021-02-10
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献A conserved PI(4,5)P2-binding domain is critical for immune regulatory function of DOCK8.
Life Sci Alliance, 4, 2021
7CLY
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BU of 7cly by Molmil
Structure of the DOCK8 DHR-1 domain crystallized with di-C8-phosphatidylinositol-(4,5)-bisphosphate
分子名称: Dedicator of cytokinesis protein 8
著者Kukimoto-Niino, M, Shirouzu, M, Yokoyama, S, Fukui, Y, Uruno, T.
登録日2020-07-22
公開日2021-02-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.432 Å)
主引用文献A conserved PI(4,5)P2-binding domain is critical for immune regulatory function of DOCK8.
Life Sci Alliance, 4, 2021
1IUJ
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BU of 1iuj by Molmil
The structure of TT1380 protein from thermus thermophilus
分子名称: ZINC ION, hypothetical protein TT1380
著者Wada, T, Shirouzu, M, Park, S.-Y, Tame, J.R.H, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-03-05
公開日2003-09-09
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of the conserved hypothetical protein TT1380 from Thermus thermophilus HB8
Proteins, 55, 2004
7CD1
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BU of 7cd1 by Molmil
Crystal structure of inhibitory Smad, Smad7
分子名称: CHLORIDE ION, Mothers against decapentaplegic homolog 7, SULFATE ION
著者Murayama, K, Kato-Murayama, M, Shirouzu, M.
登録日2020-06-18
公開日2021-03-17
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structural basis for inhibitory effects of Smad7 on TGF-beta family signaling.
J.Struct.Biol., 212, 2020

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件を2025-07-09に公開中

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