Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7TGY
DownloadVisualize
BU of 7tgy by Molmil
Prototypic SARS-CoV-2 G614 spike (closed form)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Ye, G, Liu, B, Li, F.
登録日2022-01-09
公開日2022-03-09
最終更新日2022-03-16
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Cryo-EM structure of a SARS-CoV-2 omicron spike protein ectodomain.
Nat Commun, 13, 2022
7TGW
DownloadVisualize
BU of 7tgw by Molmil
Omicron spike at 3.0 A (open form)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Ye, G, Liu, B, Li, F.
登録日2022-01-09
公開日2022-03-09
最終更新日2022-03-16
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Cryo-EM structure of a SARS-CoV-2 omicron spike protein ectodomain.
Nat Commun, 13, 2022
1YUK
DownloadVisualize
BU of 1yuk by Molmil
The crystal structure of the PSI/Hybrid domain/ I-EGF1 segment from the human integrin beta2 at 1.8 resolution
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose, Integrin beta-2 A chain, Integrin beta-2 B chain
著者Shi, M, Sundramurthy, K, Liu, B, Tan, S.M, Law, S.K, Lescar, J.
登録日2005-02-14
公開日2005-07-19
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Crystal Structure of the Plexin-Semaphorin-Integrin Domain/Hybrid Domain/I-EGF1 Segment from the Human Integrin {beta}2 Subunit at 1.8-A Resolution
J.Biol.Chem., 280, 2005
8G76
DownloadVisualize
BU of 8g76 by Molmil
SARS-CoV-2 spike/Nb5 complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanosota-5, ...
著者Ye, G, Bu, F, Liu, B, Li, F.
登録日2023-02-16
公開日2024-02-21
最終更新日2024-09-25
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Dual-role epitope on SARS-CoV-2 spike enhances and neutralizes viral entry across different variants.
Plos Pathog., 20, 2024
8G77
DownloadVisualize
BU of 8g77 by Molmil
SARS-CoV-2 spike/Nb6 complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanosota-6, ...
著者Ye, G, Bu, F, Liu, B, Li, F.
登録日2023-02-16
公開日2024-02-21
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Dual-role epitope on SARS-CoV-2 spike enhances and neutralizes viral entry across different variants.
Plos Pathog., 20, 2024
6KOE
DownloadVisualize
BU of 6koe by Molmil
X-ray Structure of the proton-pumping cytochrome aa3-600 menaquinol oxidase from Bacillus subtilis
分子名称: 2-HEPTYL-4-HYDROXY QUINOLINE N-OXIDE, AA3-600 quinol oxidase subunit I, AA3-600 quinol oxidase subunit IIII, ...
著者Xu, J, Ding, Z, Liu, B, Li, J, Gennis, R.B, Zhu, J.
登録日2019-08-09
公開日2020-01-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.75 Å)
主引用文献Structure of the cytochromeaa3-600 heme-copper menaquinol oxidase bound to inhibitor HQNO shows TM0 is part of the quinol binding site.
Proc.Natl.Acad.Sci.USA, 117, 2020
6KOC
DownloadVisualize
BU of 6koc by Molmil
X-ray Structure of the proton-pumping cytochrome aa3-600 menaquinol oxidase from Bacillus subtilis complexed with 3-iodo-N-oxo-2-heptyl-4-hydroxyquinoline
分子名称: 2-heptyl-3-iodanyl-1-oxidanyl-quinolin-4-one, AA3-600 quinol oxidase subunit I, AA3-600 quinol oxidase subunit IIII, ...
著者Xu, J, Ding, Z, Liu, B, Li, J, Gennis, R.B, Zhu, J.
登録日2019-08-09
公開日2020-01-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Structure of the cytochromeaa3-600 heme-copper menaquinol oxidase bound to inhibitor HQNO shows TM0 is part of the quinol binding site.
Proc.Natl.Acad.Sci.USA, 117, 2020
6KOB
DownloadVisualize
BU of 6kob by Molmil
X-ray Structure of the proton-pumping cytochrome aa3-600 menaquinol oxidase from Bacillus subtilis
分子名称: AA3-600 quinol oxidase subunit I, AA3-600 quinol oxidase subunit IIII, AA3-600 quinol oxidase subunit IV,Quinol oxidase subunit 4, ...
著者Xu, J, Ding, Z, Liu, B, Li, J, Gennis, R.B, Zhu, J.
登録日2019-08-09
公開日2020-01-15
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structure of the cytochromeaa3-600 heme-copper menaquinol oxidase bound to inhibitor HQNO shows TM0 is part of the quinol binding site.
Proc.Natl.Acad.Sci.USA, 117, 2020
8HD5
DownloadVisualize
BU of 8hd5 by Molmil
The crystal structure of Hu protein in Staphylococcus aureus
分子名称: DNA-binding protein HU
著者Liu, Y.H, Chen, H, Li, Y, Liu, B.
登録日2022-11-03
公開日2023-12-06
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献The crystal structure of Hu protein in Staphylococcus aureus
To Be Published
7KYQ
DownloadVisualize
BU of 7kyq by Molmil
Crystal structure of human BCCIP beta (Native1)
分子名称: BRCA2 and CDKN1A-interacting protein
著者Choi, W.S, Liu, B, Shen, Z, Yang, W.
登録日2020-12-08
公開日2021-06-09
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.06 Å)
主引用文献Structure of human BCCIP and implications for binding and modification of partner proteins.
Protein Sci., 30, 2021
7KYS
DownloadVisualize
BU of 7kys by Molmil
Crystal structure of human BCCIP beta (Native2)
分子名称: 1,2-ETHANEDIOL, BRCA2 and CDKN1A-interacting protein, DI(HYDROXYETHYL)ETHER
著者Choi, W.S, Liu, B, Shen, Z, Yang, W.
登録日2020-12-08
公開日2021-06-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of human BCCIP and implications for binding and modification of partner proteins.
Protein Sci., 30, 2021
7LMA
DownloadVisualize
BU of 7lma by Molmil
Tetrahymena telomerase T3D2 structure at 3.3 Angstrom
分子名称: Telomerase La-related protein p65, Telomerase RNA, Telomerase associated protein p50, ...
著者He, Y, Wang, Y, Liu, B, Helmling, C, Susac, L, Cheng, R, Zhou, Z.H, Feigon, J.
登録日2021-02-05
公開日2021-05-12
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structures of telomerase at several steps of telomere repeat synthesis.
Nature, 593, 2021
7LMB
DownloadVisualize
BU of 7lmb by Molmil
Tetrahymena telomerase T5D5 structure at 3.8 Angstrom
分子名称: Telomerase La-related protein p65, Telomerase RNA, Telomerase associated protein p50, ...
著者He, Y, Wang, Y, Liu, B, Helmling, C, Susac, L, Cheng, R, Zhou, Z.H, Feigon, J.
登録日2021-02-05
公開日2021-05-12
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structures of telomerase at several steps of telomere repeat synthesis.
Nature, 593, 2021
7LXV
DownloadVisualize
BU of 7lxv by Molmil
Structure of human 20S proteasome with bound MPI-5
分子名称: N-[(1R)-2-([1,1'-biphenyl]-4-yl)-1-boronoethyl]-1-methyl-L-prolinamide, Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, ...
著者Metcalfe, R.D, Morton, C.J, Liu, B, Xie, S.C, Hanssen, E, Leis, A.P, Tilley, L, Griffin, M.D.W.
登録日2021-03-05
公開日2021-09-22
最終更新日2022-04-13
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Design of proteasome inhibitors with oral efficacy in vivo against Plasmodium falciparum and selectivity over the human proteasome.
Proc.Natl.Acad.Sci.USA, 118, 2021
7LXT
DownloadVisualize
BU of 7lxt by Molmil
Structure of Plasmodium falciparum 20S proteasome with bound bortezomib
分子名称: 20S proteasome alpha-1 subunit, 20S proteasome alpha-2 subunit, 20S proteasome alpha-3 subunit, ...
著者Morton, C.J, Metcalfe, R.D, Liu, B, Xie, S.C, Hanssen, E, Leis, A.P, Tilley, L, Griffin, M.D.W.
登録日2021-03-05
公開日2021-09-22
最終更新日2022-04-13
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Design of proteasome inhibitors with oral efficacy in vivo against Plasmodium falciparum and selectivity over the human proteasome.
Proc.Natl.Acad.Sci.USA, 118, 2021
7LXU
DownloadVisualize
BU of 7lxu by Molmil
Structure of Plasmodium falciparum 20S proteasome with bound MPI-5
分子名称: 20S proteasome alpha-1 subunit, 20S proteasome alpha-2 subunit, 20S proteasome alpha-3 subunit, ...
著者Metcalfe, R.D, Morton, C.J, Xie, S.C, Liu, B, Hanssen, E, Leis, A.P, Tilley, L, Griffin, M.D.W.
登録日2021-03-05
公開日2021-09-22
最終更新日2022-04-13
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Design of proteasome inhibitors with oral efficacy in vivo against Plasmodium falciparum and selectivity over the human proteasome.
Proc.Natl.Acad.Sci.USA, 118, 2021
8THF
DownloadVisualize
BU of 8thf by Molmil
SARS-CoV-2 BA.1 S-6P-no-RBD
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1,Spike glycoprotein
著者Bu, F, Li, F, Liu, B.
登録日2023-07-15
公開日2024-07-17
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (2.83 Å)
主引用文献Universal subunit vaccine protects against multiple SARS-CoV-2 variants and SARS-CoV.
Npj Vaccines, 9, 2024
8UUL
DownloadVisualize
BU of 8uul by Molmil
Prototypic SARS-CoV-2 spike (containing K417) in the closed conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Geng, Q, Liu, B, Li, F.
登録日2023-11-01
公開日2023-11-29
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Lys417 acts as a molecular switch that regulates the conformation of SARS-CoV-2 spike protein.
Elife, 12, 2023
8UUM
DownloadVisualize
BU of 8uum by Molmil
Prototypic SARS-CoV-2 spike (containing K417) in the open conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, alpha-D-mannopyranose, ...
著者Geng, Q, Liu, B, Li, F.
登録日2023-11-01
公開日2023-11-29
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Lys417 acts as a molecular switch that regulates the conformation of SARS-CoV-2 spike protein.
Elife, 12, 2023
8UUN
DownloadVisualize
BU of 8uun by Molmil
Prototypic SARS-CoV-2 spike (containing V417) in the closed conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Geng, Q, Liu, B, Li, F.
登録日2023-11-01
公開日2023-11-29
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Lys417 acts as a molecular switch that regulates the conformation of SARS-CoV-2 spike protein.
Elife, 12, 2023
8UUO
DownloadVisualize
BU of 8uuo by Molmil
Prototypic SARS-CoV-2 spike (containing V417) in the open conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, alpha-D-mannopyranose, ...
著者Geng, Q, Liu, B, Li, F.
登録日2023-11-01
公開日2023-11-29
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Lys417 acts as a molecular switch that regulates the conformation of SARS-CoV-2 spike protein.
Elife, 12, 2023
8UPX
DownloadVisualize
BU of 8upx by Molmil
Omicron-S-MERS-RBD
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein,SARS-CoV-2 omicron spike with MERS RBD
著者Bu, F, Li, F, Liu, B.
登録日2023-10-23
公開日2024-08-21
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Pan-beta-coronavirus subunit vaccine prevents SARS-CoV-2 Omicron, SARS-CoV, and MERS-CoV challenge.
J.Virol., 98, 2024
8UCO
DownloadVisualize
BU of 8uco by Molmil
CryoEM structure of Komagataella pastoris Cytochrome c oxidase (9 subunits) in complex with human VMAT2 and Amphetamine
分子名称: (2S)-1-phenylpropan-2-amine, COPPER (II) ION, Cytochrome c oxidase subunit 1, ...
著者Ye, J, Liu, B, Li, W.
登録日2023-09-26
公開日2024-10-09
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献cryoEM structure of Komagataella pastoris Cytochrome c oxidase (9 subunits) in complex with human VMAT2 and Amphetamin
To Be Published
8UCK
DownloadVisualize
BU of 8uck by Molmil
Komagataella pastoris Cytochrome c oxidase (9 subunits) in complex with human VMAT2
分子名称: COPPER (II) ION, Cytochrome c oxidase subunit 1, Cytochrome c oxidase subunit 2, ...
著者Ye, J, Liu, B, Li, W.
登録日2023-09-26
公開日2024-10-09
実験手法ELECTRON MICROSCOPY (3.26 Å)
主引用文献Komagataella pastoris Cytochrome c oxidase (9 subunits) in complex with human VMAT2
To Be Published
8UCN
DownloadVisualize
BU of 8ucn by Molmil
Komagataella pastoris Cytochrome c oxidase in complex with human VMAT2 and Histamine
分子名称: COPPER (II) ION, Cytochrome c oxidase subunit 1, Cytochrome c oxidase subunit 2, ...
著者Ye, J, Liu, B, Li, W.
登録日2023-09-26
公開日2024-10-09
実験手法ELECTRON MICROSCOPY (3.31 Å)
主引用文献Komagataella pastoris Cytochrome c oxidase in complex with human VMAT2 and Histamine
To Be Published

226707

件を2024-10-30に公開中

PDB statisticsPDBj update infoContact PDBjnumon