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3HTE
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BU of 3hte by Molmil
Crystal structure of nucleotide-free hexameric ClpX
分子名称: ATP-dependent Clp protease ATP-binding subunit clpX, SULFATE ION
著者Glynn, S.E, Martin, A, Baker, T.A, Sauer, R.T.
登録日2009-06-11
公開日2009-11-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (4.026 Å)
主引用文献Structures of asymmetric ClpX hexamers reveal nucleotide-dependent motions in a AAA+ protein-unfolding machine.
Cell(Cambridge,Mass.), 139, 2009
3HWS
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BU of 3hws by Molmil
Crystal structure of nucleotide-bound hexameric ClpX
分子名称: ADENOSINE-5'-DIPHOSPHATE, ATP-dependent Clp protease ATP-binding subunit clpX, MAGNESIUM ION, ...
著者Glynn, S.E, Martin, A, Baker, T.A, Sauer, R.T.
登録日2009-06-18
公開日2009-11-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Structures of asymmetric ClpX hexamers reveal nucleotide-dependent motions in a AAA+ protein-unfolding machine.
Cell(Cambridge,Mass.), 139, 2009
6J06
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BU of 6j06 by Molmil
Crystal structure of intracellular B30.2 domain of BTN3A1 in complex with HMBPP-08
分子名称: (2E)-3-(hydroxymethyl)-4-(4-methylphenyl)but-2-en-1-yl trihydrogen diphosphate, Butyrophilin subfamily 3 member A1, CALCIUM ION, ...
著者Yang, Y.Y, Liu, W.D, Cai, N.N, Chen, C.C, Guo, R.T, Zhang, Y.H.
登録日2018-12-21
公開日2019-04-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献A Structural Change in Butyrophilin upon Phosphoantigen Binding Underlies Phosphoantigen-Mediated V gamma 9V delta 2 T Cell Activation.
Immunity, 50, 2019
3LGY
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BU of 3lgy by Molmil
R178A mutant of the DegS-deltaPDZ protease
分子名称: CHLORIDE ION, MAGNESIUM ION, Protease degS
著者Sohn, J, Grant, R.A, Sauer, R.T.
登録日2010-01-21
公開日2010-08-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Allostery is an intrinsic property of the protease domain of DegS: implications for enzyme function and evolution.
J.Biol.Chem., 285, 2010
6J03
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BU of 6j03 by Molmil
Crystal structure of a cyclase mutant in apo form
分子名称: 12-epi-hapalindole U synthase, CALCIUM ION, amino({3-[(3S,8aS)-1,4-dioxooctahydropyrrolo[1,2-a]pyrazin-3-yl]propyl}amino)methaniminium
著者Tang, X.K, Liu, W.D, Chen, C.C, Guo, R.T.
登録日2018-12-20
公開日2019-12-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Structural insights into the calcium dependence of Stig cyclases.
Rsc Adv, 9, 2019
3LQX
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BU of 3lqx by Molmil
SRP ribonucleoprotein core complexed with cobalt hexammine
分子名称: CHLORIDE ION, COBALT HEXAMMINE(III), POTASSIUM ION, ...
著者Batey, R.T.
登録日2010-02-10
公開日2010-03-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Structural and Energetic Analysis of Metal Ions Essential to SRP Signal Recognition Domain Assembly
Biochemistry, 41, 2002
3IPN
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BU of 3ipn by Molmil
Crystal Structure of fluorine and methyl modified collagen: (mepFlpgly)7
分子名称: CARBONATE ION, Non-natural Collagen
著者Satyshur, K.A, Shoulders, M.D, Raines, R.T, Forest, K.T.
登録日2009-08-18
公開日2010-02-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.21 Å)
主引用文献Stereoelectronic and steric effects in side chains preorganize a protein main chain.
Proc.Natl.Acad.Sci.USA, 107, 2010
6J8V
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BU of 6j8v by Molmil
Structure of MOEN5-SSO7D fusion protein in complex with ligand 2
分子名称: FARNESYL, MoeN5,DNA-binding protein 7d
著者Ko, T.P, Zhang, L.L, Chen, C.C, Guo, R.T.
登録日2019-01-21
公開日2019-04-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Complex structures of MoeN5 with substrate analogues suggest sequential catalytic mechanism.
Biochem. Biophys. Res. Commun., 511, 2019
3LGV
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BU of 3lgv by Molmil
H198P mutant of the DegS-deltaPDZ protease
分子名称: Protease degS
著者Sohn, J, Grant, R.A, Sauer, R.T.
登録日2010-01-21
公開日2010-08-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.734 Å)
主引用文献Allostery is an intrinsic property of the protease domain of DegS: implications for enzyme function and evolution.
J.Biol.Chem., 285, 2010
3LGW
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BU of 3lgw by Molmil
H198P/T167V double mutant of DegS-deltaPDZ protease
分子名称: Protease degS
著者Sohn, J, Grant, R.A, Sauer, R.T.
登録日2010-01-21
公開日2010-08-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Allostery is an intrinsic property of the protease domain of DegS: implications for enzyme function and evolution.
J.Biol.Chem., 285, 2010
3LGI
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BU of 3lgi by Molmil
Structure of the protease domain of DegS (DegS-deltaPDZ) at 1.65 A
分子名称: PHOSPHATE ION, Protease degS
著者Sohn, J, Grant, R.A, Sauer, R.T.
登録日2010-01-20
公開日2010-08-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.652 Å)
主引用文献Allostery is an intrinsic property of the protease domain of DegS: implications for enzyme function and evolution.
J.Biol.Chem., 285, 2010
3LGT
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BU of 3lgt by Molmil
Y162A/H198P double mutant of DegS-deltaPDZ protease
分子名称: Protease degS
著者Sohn, J, Grant, R.A, Sauer, R.T.
登録日2010-01-21
公開日2010-08-25
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.68 Å)
主引用文献Allostery is an intrinsic property of the protease domain of DegS: implications for enzyme function and evolution.
J.Biol.Chem., 285, 2010
3LH3
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BU of 3lh3 by Molmil
DFP modified DegS delta PDZ
分子名称: Protease degS
著者Sohn, J, Grant, R.A, Sauer, R.T.
登録日2010-01-21
公開日2010-08-25
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Allostery is an intrinsic property of the protease domain of DegS: implications for enzyme function and evolution.
J.Biol.Chem., 285, 2010
4HW0
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BU of 4hw0 by Molmil
Crystal structure of Sso10a-2, a DNA-binding protein from Sulfolobus solfataricus
分子名称: DNA-binding protein Sso10a-2
著者Waterreus, W.J, Goosen, N, Moolenaar, G.F, Driessen, R.P.C, Dame, R.T, Pannu, N.S.
登録日2012-11-07
公開日2013-10-30
最終更新日2017-01-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Diverse architectural properties of Sso10a proteins: Evidence for a role in chromatin compaction and organization.
Sci Rep, 6, 2016
4I63
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BU of 4i63 by Molmil
Crystal Structure of E-R ClpX Hexamer
分子名称: ATP-dependent Clp protease ATP-binding subunit ClpX, SULFATE ION
著者Glynn, S.E, Nager, A.R, Stinson, B.S, Schmitz, K.R, Baker, T.A, Sauer, R.T.
登録日2012-11-29
公開日2013-05-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (5.709 Å)
主引用文献Nucleotide Binding and Conformational Switching in the Hexameric Ring of a AAA+ Machine.
Cell(Cambridge,Mass.), 153, 2013
3RSD
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BU of 3rsd by Molmil
STRUCTURE OF THE D121N VARIANT OF RIBONUCLEASE A
分子名称: RIBONUCLEASE A
著者Schultz, L.W, Quirk, D.J, Raines, R.T.
登録日1998-02-05
公開日1998-07-15
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献His...Asp catalytic dyad of ribonuclease A: structure and function of the wild-type, D121N, and D121A enzymes.
Biochemistry, 37, 1998
4FRN
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BU of 4frn by Molmil
Crystal structure of the cobalamin riboswitch regulatory element
分子名称: BARIUM ION, Cobalamin riboswitch aptamer domain, Hydroxocobalamin
著者Reyes, F.E, Johnson, J.E, Polaski, J.T, Batey, R.T.
登録日2012-06-26
公開日2012-10-17
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.43 Å)
主引用文献B12 cofactors directly stabilize an mRNA regulatory switch.
Nature, 492, 2012
4FRG
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BU of 4frg by Molmil
Crystal structure of the cobalamin riboswitch aptamer domain
分子名称: Hydroxocobalamin, IRIDIUM (III) ION, MAGNESIUM ION, ...
著者Reyes, F.E, Johnson, J.E, Polaski, J.T, Batey, R.T.
登録日2012-06-26
公開日2012-10-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献B12 cofactors directly stabilize an mRNA regulatory switch.
Nature, 492, 2012
4GMA
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BU of 4gma by Molmil
Crystal structure of the adenosylcobalamin riboswitch
分子名称: Adenosylcobalamin, Adenosylcobalamin riboswitch
著者Reyes, F.E, Johnson, J.E, Polaski, J.T, Batey, R.T.
登録日2012-08-15
公開日2012-10-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.94 Å)
主引用文献B12 cofactors directly stabilize an mRNA regulatory switch.
Nature, 492, 2012
4ISZ
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BU of 4isz by Molmil
RNA ligase RtcB in complex with GTP alphaS and Mn(II)
分子名称: GUANOSINE-5'-RP-ALPHA-THIO-TRIPHOSPHATE, MANGANESE (II) ION, SULFATE ION, ...
著者Desai, K.K, Bingman, C.A, Phillips Jr, G.N, Raines, R.T.
登録日2013-01-17
公開日2013-04-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.303 Å)
主引用文献Structures of the Noncanonical RNA Ligase RtcB Reveal the Mechanism of Histidine Guanylylation.
Biochemistry, 52, 2013
4IWN
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BU of 4iwn by Molmil
Crystal structure of a putative methyltransferase CmoA in complex with a novel SAM derivative
分子名称: (2S)-4-[{[(2S,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl}(carboxylatomethyl)sulfonio] -2-ammoniobutanoate, (4S)-2-METHYL-2,4-PENTANEDIOL, tRNA (cmo5U34)-methyltransferase
著者Aller, P, Lobley, C.M, Byrne, R.T, Antson, A.A, Waterman, D.G.
登録日2013-01-24
公開日2013-05-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献S-Adenosyl-S-carboxymethyl-L-homocysteine: a novel cofactor found in the putative tRNA-modifying enzyme CmoA.
Acta Crystallogr.,Sect.D, 69, 2013
7URT
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BU of 7urt by Molmil
T=1 particle HIV-1 CA G60A/G61P/M66A
分子名称: Gag polyprotein, INOSITOL HEXAKISPHOSPHATE
著者Pornillos, O, Ganser-Pornillos, B.K, Schirra, R.T.
登録日2022-04-22
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.39 Å)
主引用文献A molecular switch modulates assembly and host factor binding of the HIV-1 capsid.
Nat.Struct.Mol.Biol., 30, 2023
7URN
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BU of 7urn by Molmil
Structure of HIV-1 capsid declination
分子名称: HIV-1 capsid protein, INOSITOL HEXAKISPHOSPHATE
著者Pornillos, O, Ganser-Pornillos, B.K, Schirra, R.T.
登録日2022-04-22
公開日2023-02-15
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.43 Å)
主引用文献A molecular switch modulates assembly and host factor binding of the HIV-1 capsid.
Nat.Struct.Mol.Biol., 30, 2023
4G34
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BU of 4g34 by Molmil
Crystal Structure of GSK6924 Bound to PERK (R587-R1092, delete A660-T867) at 2.70 A Resolution
分子名称: 1-[5-(4-aminothieno[3,2-c]pyridin-3-yl)-2,3-dihydro-1H-indol-1-yl]-2-phenylethanone, Eukaryotic translation initiation factor 2-alpha kinase 3
著者Gampe, R.T, Axten, J.M.
登録日2012-07-13
公開日2012-08-08
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Discovery of 7-Methyl-5-(1-{[3-(trifluoromethyl)phenyl]acetyl}-2,3-dihydro-1H-indol-5-yl)-7H-pyrrolo[2,3-d]pyrimidin-4-amine (GSK2606414), a Potent and Selective First-in-Class Inhibitor of Protein Kinase R (PKR)-like Endoplasmic Reticulum Kinase (PERK).
J.Med.Chem., 55, 2012
4G31
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BU of 4g31 by Molmil
Crystal Structure of GSK6414 Bound to PERK (R587-R1092, delete A660-T867) at 2.28 A Resolution
分子名称: 1-[5-(4-amino-7-methyl-7H-pyrrolo[2,3-d]pyrimidin-5-yl)-2,3-dihydro-1H-indol-1-yl]-2-[3-(trifluoromethyl)phenyl]ethanone, Eukaryotic translation initiation factor 2-alpha kinase 3, GLYCEROL
著者Gampe, R.T, Axten, J.M.
登録日2012-07-13
公開日2012-08-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Discovery of 7-Methyl-5-(1-{[3-(trifluoromethyl)phenyl]acetyl}-2,3-dihydro-1H-indol-5-yl)-7H-pyrrolo[2,3-d]pyrimidin-4-amine (GSK2606414), a Potent and Selective First-in-Class Inhibitor of Protein Kinase R (PKR)-like Endoplasmic Reticulum Kinase (PERK).
J.Med.Chem., 55, 2012

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