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7EC1
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BU of 7ec1 by Molmil
Crystal structure of SdgB (ligand-free form)
分子名称: GLYCEROL, Glycosyl transferase, group 1 family protein, ...
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-03-11
公開日2021-03-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7EC3
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BU of 7ec3 by Molmil
Crystal structure of SdgB (complexed with UDP, GlcNAc, and Glycosylated peptide)
分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-35)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-65)]5,6-DIHYDRO-BENZO[H]CINNOLIN-3-YLAMINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, Glycosyl transferase, ...
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-03-11
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7EC6
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BU of 7ec6 by Molmil
Crystal structure of SdgB (complexed with peptides)
分子名称: ASP-SER-ASP, Glycosyl transferase, group 1 family protein
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-03-11
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7EC7
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BU of 7ec7 by Molmil
Crystal structure of SdgB (complexed with phosphate ions)
分子名称: Glycosyl transferase, group 1 family protein, PHOSPHATE ION
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-03-11
公開日2022-03-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7EWI
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BU of 7ewi by Molmil
Toxin protein from Staphylococcus aureus
分子名称: Endoribonuclease MazF, GLYCEROL, PHOSPHATE ION
著者Kim, D.H, Kang, S.M, Lee, S.J, Lee, B.J.
登録日2021-05-25
公開日2022-02-16
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Role of PemI in the Staphylococcus aureus PemIK toxin-antitoxin complex: PemI controls PemK by acting as a PemK loop mimic.
Nucleic Acids Res., 50, 2022
7EWJ
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BU of 7ewj by Molmil
Toxin-antitoxin complex from Staphylococcus aureus
分子名称: Endoribonuclease MazF, GLYCEROL, PemI inhibitor, ...
著者Kim, D.H, Kang, S.M, Lee, S.J, Lee, B.J.
登録日2021-05-25
公開日2022-02-16
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Role of PemI in the Staphylococcus aureus PemIK toxin-antitoxin complex: PemI controls PemK by acting as a PemK loop mimic.
Nucleic Acids Res., 50, 2022
7ERR
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BU of 7err by Molmil
Tunnel-redesigned O2-tolerant CO dehydrogenase for removal of CO in real flue gas (Aerobic ChCODH2 A559W mutant)
分子名称: Carbon monoxide dehydrogenase 2, FE(4)-NI(1)-S(5) CLUSTER, FE2/S2 (INORGANIC) CLUSTER, ...
著者Heo, Y.Y, Kim, S.M.
登録日2021-05-06
公開日2022-10-05
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献O2-tolerant CO dehydrogenase via tunnel redesign for the removal of CO from industrial flue gas
Nat Catal, 5, 2022
5F8E
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BU of 5f8e by Molmil
Rv2258c-SAH
分子名称: Methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
著者Im, H.N, Suh, S.W.
登録日2015-12-09
公開日2016-06-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of Rv2258c from Mycobacterium tuberculosis H37Rv, an S-adenosyl-l-methionine-dependent methyltransferase
J.Struct.Biol., 193, 2016
5F8C
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BU of 5f8c by Molmil
Rv2258c-unbound
分子名称: GLYCEROL, Methyltransferase
著者Im, H.N, Suh, S.W.
登録日2015-12-09
公開日2016-06-29
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Crystal structure of Rv2258c from Mycobacterium tuberculosis H37Rv, an S-adenosyl-l-methionine-dependent methyltransferase
J.Struct.Biol., 193, 2016
5F8F
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BU of 5f8f by Molmil
Rv2258c-SFG
分子名称: GLYCEROL, Methyltransferase, SINEFUNGIN
著者Im, H.N, Suh, S.W.
登録日2015-12-09
公開日2016-06-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of Rv2258c from Mycobacterium tuberculosis H37Rv, an S-adenosyl-l-methionine-dependent methyltransferase
J.Struct.Biol., 193, 2016
3V6A
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BU of 3v6a by Molmil
Helical repeat structure of apoptosis inhibitor 5 reveals protein-protein interaction modules
分子名称: Apoptosis inhibitor 5
著者Lee, B.I, Han, B.G, Lee, S.J.
登録日2011-12-19
公開日2012-02-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Helical repeat structure of apoptosis inhibitor 5 reveals protein-protein interaction modules.
J.Biol.Chem., 287, 2012
6JHW
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BU of 6jhw by Molmil
Structure of anti-CRISPR AcrIIC3 and NmeCas9 HNH
分子名称: AcrIIC3, CRISPR-associated endonuclease Cas9
著者Suh, J.Y, Lee, B.J, Lee, S.J, Kim, Y.
登録日2019-02-19
公開日2019-08-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Anti-CRISPR AcrIIC3 discriminates between Cas9 orthologs via targeting the variable surface of the HNH nuclease domain.
Febs J., 286, 2019
6JHV
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BU of 6jhv by Molmil
Structure of anti-CRISPR AcrIIC3
分子名称: AcrIIC3
著者Suh, J.Y, Lee, B.J, Lee, S.J, Kim, Y.
登録日2019-02-19
公開日2019-08-28
最終更新日2019-12-18
実験手法X-RAY DIFFRACTION (2.321 Å)
主引用文献Anti-CRISPR AcrIIC3 discriminates between Cas9 orthologs via targeting the variable surface of the HNH nuclease domain.
Febs J., 286, 2019
5YRZ
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BU of 5yrz by Molmil
Toxin-Antitoxin complex from Streptococcus pneumoniae
分子名称: GLYCEROL, HicA, HicB, ...
著者Kang, S.M, Kim, D.H.
登録日2017-11-11
公開日2018-05-23
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.304 Å)
主引用文献Functional insights into the Streptococcus pneumoniae HicBA toxin-antitoxin system based on a structural study.
Nucleic Acids Res., 46, 2018
6LSU
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BU of 6lsu by Molmil
Crystal structure of Uso1-2
分子名称: Intracellular protein transport protein USO1
著者Heo, Y.Y, Lee, H.H.
登録日2020-01-20
公開日2021-01-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structures of Uso1 membrane tether reveal an alternative conformation in the globular head domain
Sci Rep, 10, 2020
6LST
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BU of 6lst by Molmil
Crystal straucture of Uso1-1
分子名称: Intracellular protein transport protein USO1
著者Heo, Y.Y, Lee, H.H.
登録日2020-01-20
公開日2021-01-27
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献Crystal structures of Uso1 membrane tether reveal an alternative conformation in the globular head domain
Sci Rep, 10, 2020
7VFN
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BU of 7vfn by Molmil
Crystal structure of SdgB (SD peptide-binding form)
分子名称: ASP-SER-ASP, Glycosyl transferase, group 1 family protein
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-09-13
公開日2021-11-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7VFM
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BU of 7vfm by Molmil
Crystal structure of SdgB (UDP and SD peptide-binding form)
分子名称: Glycosyl transferase, group 1 family protein, SER-ASP-SER-ASP, ...
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-09-13
公開日2021-11-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7VFL
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BU of 7vfl by Molmil
Crystal structure of SdgB (UDP, NAG, and O-glycosylated SD peptide-binding form)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glycosyl transferase, group 1 family protein, ...
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-09-13
公開日2021-11-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
7VFO
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BU of 7vfo by Molmil
Crystal structure of SdgB (Phosphate-binding form)
分子名称: Glycosyl transferase, group 1 family protein, PHOSPHATE ION
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-09-13
公開日2021-11-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
4NJR
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BU of 4njr by Molmil
Structural and kinetic bases for the metal preference of the M18 aminopeptidase from Pseudomonas aeruginosa
分子名称: CARBONATE ION, Probable M18 family aminopeptidase 2, ZINC ION
著者Nguyen, D.D, Pandian, R, Kim, D.Y, Ha, S.C, Yun, K.H, Kim, K.S, Kim, J.H, Kim, K.K.
登録日2013-11-11
公開日2014-04-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural and kinetic bases for the metal preference of the M18 aminopeptidase from Pseudomonas aeruginosa
Biochem.Biophys.Res.Commun., 447, 2014
7VFK
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BU of 7vfk by Molmil
Crystal structure of SdgB (ligand-free form)
分子名称: GLYCEROL, Glycosyl transferase, group 1 family protein, ...
著者Kim, D.-G, Baek, I, Lee, Y, Kim, H.S.
登録日2021-09-13
公開日2021-11-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Structural basis for SdgB- and SdgA-mediated glycosylation of staphylococcal adhesive proteins.
Acta Crystallogr D Struct Biol, 77, 2021
4NRN
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BU of 4nrn by Molmil
Crystal structure of metal-bound toxin from Helicobacter pylori
分子名称: ZINC ION, metal-bound toxin
著者Lee, B.J, Im, H, Pathak, C, Jang, S.B.
登録日2013-11-27
公開日2014-10-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.802 Å)
主引用文献Crystal structure of toxin HP0892 from Helicobacter pylori with two Zn(II) at 1.8 angstrom resolution
Protein Sci., 23, 2014
4NJQ
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BU of 4njq by Molmil
Structural and kinetic bases for the metal preference of the M18 aminopeptidase from Pseudomonas aeruginosa
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, CARBONATE ION, COBALT (II) ION, ...
著者Nguyen, D.D, Pandian, R, Kim, D.Y, Ha, S.C, Yun, K.H, Kim, K.S, Kim, J.H, Kim, K.K.
登録日2013-11-11
公開日2014-04-02
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.702 Å)
主引用文献Structural and kinetic bases for the metal preference of the M18 aminopeptidase from Pseudomonas aeruginosa
Biochem.Biophys.Res.Commun., 447, 2014
7XDP
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BU of 7xdp by Molmil
Tunnel-redesigned O2-tolerant CO dehydrogenase for removal of CO in real flue gas (ChCODH2 A559S mutant in anaerobic condition)
分子名称: Carbon monoxide dehydrogenase 2, FE(4)-NI(1)-S(5) CLUSTER, FE2/S2 (INORGANIC) CLUSTER, ...
著者Heo, Y.Y, Kim, S.M.
登録日2022-03-28
公開日2022-10-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献O2-tolerant CO dehydrogenase via tunnel redesign for the removal of CO from industrial flue gas
Nat Catal, 5, 2022

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