2ZTW
| Structure of 3-isopropylmalate dehydrogenase in complex with the inhibitor and NAD+ | 分子名称: | (2Z)-2-hydroxy-3-(methylsulfanyl)prop-2-enoic acid, 3-isopropylmalate dehydrogenase, MAGNESIUM ION, ... | 著者 | Nango, E, Kumasaka, T, Eguchi, T. | 登録日 | 2008-10-10 | 公開日 | 2009-10-13 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.79 Å) | 主引用文献 | Crystal structure of 3-isopropylmalate dehydrogenase in complex with NAD(+) and a designed inhibitor Bioorg.Med.Chem., 17, 2009
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3ASJ
| Crystal structure of homoisocitrate dehydrogenase in complex with a designed inhibitor | 分子名称: | (2Z)-3-[(carboxymethyl)sulfanyl]-2-hydroxyprop-2-enoic acid, (4S)-2-METHYL-2,4-PENTANEDIOL, 3-[(carboxymethyl)sulfanyl]-2-oxopropanoic acid, ... | 著者 | Nango, E, Kumasaka, T, Eguchi, T. | 登録日 | 2010-12-13 | 公開日 | 2011-09-21 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Structure of Thermus thermophilus homoisocitrate dehydrogenase in complex with a designed inhibitor J.Biochem., 150, 2011
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3AGH
| X-ray analysis of lysozyme in the presence of 200 mM Arg | 分子名称: | ACETATE ION, CHLORIDE ION, Lysozyme C, ... | 著者 | Ito, L, Shiraki, K, Hasegawa, K, Baba, S, Kumasaka, T. | 登録日 | 2010-03-31 | 公開日 | 2011-03-23 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.49 Å) | 主引用文献 | High-resolution X-ray analysis reveals binding of arginine to aromatic residues of lysozyme surface: implication of suppression of protein aggregation by arginine Protein Eng.Des.Sel., 24, 2011
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3AGG
| X-ray analysis of lysozyme in the absence of Arg | 分子名称: | ACETATE ION, CHLORIDE ION, Lysozyme C, ... | 著者 | Ito, L, Shiraki, K, Hasegawa, K, Baba, S, Kumasaka, T. | 登録日 | 2010-03-31 | 公開日 | 2011-03-23 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | High-resolution X-ray analysis reveals binding of arginine to aromatic residues of lysozyme surface: implication of suppression of protein aggregation by arginine Protein Eng.Des.Sel., 24, 2011
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3AGI
| High resolution X-ray analysis of Arg-lysozyme complex in the presence of 500 mM Arg | 分子名称: | ACETATE ION, ARGININE, CHLORIDE ION, ... | 著者 | Ito, L, Shiraki, K, Hasegawa, K, Baba, S, Kumasaka, T. | 登録日 | 2010-03-31 | 公開日 | 2011-03-23 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.2 Å) | 主引用文献 | High-resolution X-ray analysis reveals binding of arginine to aromatic residues of lysozyme surface: implication of suppression of protein aggregation by arginine Protein Eng.Des.Sel., 24, 2011
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3AJN
| Structural basis of glycine amide on suppression of protein aggregation by high resolution X-ray analysis | 分子名称: | AMINOMETHYLAMIDE, CHLORIDE ION, Lysozyme C, ... | 著者 | Ito, L, Shiraki, K, Hasegawa, K, Kumasaka, T. | 登録日 | 2010-06-09 | 公開日 | 2011-02-16 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.05 Å) | 主引用文献 | Glycine amide shielding on the aromatic surfaces of lysozyme: Implication for suppression of protein aggregation Febs Lett., 585, 2011
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3ATO
| Glycine ethyl ester shielding on the aromatic surfaces of lysozyme: Implication for suppression of protein aggregation | 分子名称: | CHLORIDE ION, Lysozyme C, SODIUM ION, ... | 著者 | Ito, L, Shiraki, K, Hasegawa, K, Kumasaka, T. | 登録日 | 2011-01-06 | 公開日 | 2012-03-07 | 実験手法 | X-RAY DIFFRACTION (1.17 Å) | 主引用文献 | Glycine ethyl ester shielding on the aromatic surfaces of lysozyme: Implication for suppression of protein aggregation To be Published
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2ZW2
| Crystal Structure of Formylglycinamide Ribonucleotide Amidotransferase III from SULFOLOBUS TOKODAII (STPURS) | 分子名称: | GLYCEROL, Putative uncharacterized protein STS178 | 著者 | Suzuki, S, Tamura, S, Okada, K, Baba, S, Kumasaka, T, Nakagawa, N, Masui, R, Kuramitsu, S, Sampei, G, Kawai, G. | 登録日 | 2008-11-27 | 公開日 | 2009-11-17 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.55 Å) | 主引用文献 | Crystal Structure of Formylglycinamide Ribonucleotide Amidotransferase III from SULFOLOBUS TOKODAII (STPURS) To be Published
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3ATN
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1F88
| CRYSTAL STRUCTURE OF BOVINE RHODOPSIN | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MERCURY (II) ION, RETINAL, ... | 著者 | Okada, T, Palczewski, K, Stenkamp, R.E, Miyano, M. | 登録日 | 2000-06-29 | 公開日 | 2000-08-04 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Crystal structure of rhodopsin: A G protein-coupled receptor. Science, 289, 2000
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3KKM
| Crystal structure of H-Ras T35S in complex with GppNHp | 分子名称: | GTPase HRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, ... | 著者 | Muraoka, S, Shima, F, Liao, J, Ijiri, Y, Matsumoto, K, Ye, M, Inoue, T, Kataoka, T. | 登録日 | 2009-11-06 | 公開日 | 2010-06-16 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | 主引用文献 | Structural basis for conformational dynamics of GTP-bound Ras protein J.Biol.Chem., 285, 2010
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3KKP
| Crystal structure of M-Ras P40D in complex with GppNHp | 分子名称: | MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Ras-related protein M-Ras | 著者 | Muraoka, S, Shima, F, Liao, J, Ijiri, Y, Matsumoto, K, Ye, M, Inoue, T, Kataoka, T. | 登録日 | 2009-11-06 | 公開日 | 2010-06-16 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.35 Å) | 主引用文献 | Structural basis for conformational dynamics of GTP-bound Ras protein J.Biol.Chem., 285, 2010
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3KKN
| Crystal structure of H-Ras T35S in complex with GppNHp | 分子名称: | GTPase HRas, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER | 著者 | Muraoka, S, Shima, F, Liao, J, Ijiri, Y, Matsumoto, K, Ye, M, Inoue, T, Kataoka, T. | 登録日 | 2009-11-06 | 公開日 | 2010-06-16 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.09 Å) | 主引用文献 | Structural basis for conformational dynamics of GTP-bound Ras protein J.Biol.Chem., 285, 2010
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3KKO
| Crystal structure of M-Ras P40D/D41E/L51R in complex with GppNHp | 分子名称: | MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Ras-related protein M-Ras, ... | 著者 | Muraoka, S, Shima, F, Liao, J, Ijiri, Y, Matsumoto, K, Ye, M, Inoue, T, Kataoka, T. | 登録日 | 2009-11-06 | 公開日 | 2010-06-16 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Structural basis for conformational dynamics of GTP-bound Ras protein J.Biol.Chem., 285, 2010
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5X9Y
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2LWI
| Solution structure of H-RasT35S mutant protein in complex with Kobe2601 | 分子名称: | 2-(2,4-dinitrophenyl)-N-(4-fluorophenyl)hydrazinecarbothioamide, GTPase HRas, MAGNESIUM ION, ... | 著者 | Araki, M, Tamura, A, Shima, F, Kataoka, T. | 登録日 | 2012-08-01 | 公開日 | 2013-05-22 | 最終更新日 | 2024-05-15 | 実験手法 | SOLUTION NMR | 主引用文献 | In silico discovery of small-molecule Ras inhibitors that display antitumor activity by blocking the Ras-effector interaction. Proc.Natl.Acad.Sci.USA, 110, 2013
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3KKQ
| Crystal structure of M-Ras P40D in complex with GDP | 分子名称: | GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Ras-related protein M-Ras | 著者 | Muraoka, S, Shima, F, Liao, J, Ijiri, Y, Matsumoto, K, Ye, M, Inoue, T, Kataoka, T. | 登録日 | 2009-11-06 | 公開日 | 2010-06-16 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.2 Å) | 主引用文献 | Structural basis for conformational dynamics of GTP-bound Ras protein J.Biol.Chem., 285, 2010
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2FR6
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1GU5
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1GTW
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1GU4
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6LZJ
| Aquifex aeolicus MutL ATPase domain complexed with AMPPCP | 分子名称: | DNA mismatch repair protein MutL, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER | 著者 | Fukui, K, Izuhara, K, Yano, T. | 登録日 | 2020-02-19 | 公開日 | 2020-07-01 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.72835565 Å) | 主引用文献 | A Lynch syndrome-associated mutation at a Bergerat ATP-binding fold destabilizes the structure of the DNA mismatch repair endonuclease MutL. J.Biol.Chem., 295, 2020
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6LZI
| Aquifex aeolicus MutL ATPase domain complexed with ADP | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, DI(HYDROXYETHYL)ETHER, DNA mismatch repair protein MutL, ... | 著者 | Fukui, K, Izuhara, K, Yano, T. | 登録日 | 2020-02-19 | 公開日 | 2020-07-01 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.69105685 Å) | 主引用文献 | A Lynch syndrome-associated mutation at a Bergerat ATP-binding fold destabilizes the structure of the DNA mismatch repair endonuclease MutL. J.Biol.Chem., 295, 2020
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6LZK
| Aquifex aeolicus MutL ATPase domain with K252N mutation | 分子名称: | DI(HYDROXYETHYL)ETHER, DNA mismatch repair protein MutL, SODIUM ION | 著者 | Fukui, K, Izuhara, K, Yano, T. | 登録日 | 2020-02-19 | 公開日 | 2020-07-01 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (3.15949631 Å) | 主引用文献 | A Lynch syndrome-associated mutation at a Bergerat ATP-binding fold destabilizes the structure of the DNA mismatch repair endonuclease MutL. J.Biol.Chem., 295, 2020
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1H89
| CRYSTAL STRUCTURE OF TERNARY PROTEIN-DNA COMPLEX2 | 分子名称: | CAAT/ENHANCER BINDING PROTEIN BETA, DNA(5'-(*CP*CP*AP*GP*TP*CP*CP*GP*TP*TP*AP* AP*GP*GP*AP*TP*TP*GP*CP*GP*CP*CP*AP*CP*AP*T)-3'), DNA(5'-(*GP*AP*TP*GP*TP*GP*GP*CP*GP*CP*AP* AP*TP*CP*CP*TP*TP*AP*AP*CP*GP*GP*AP*CP*TP*G)-3'), ... | 著者 | Tahirov, T.H, Ogata, K. | 登録日 | 2001-01-30 | 公開日 | 2002-01-28 | 最終更新日 | 2023-12-13 | 実験手法 | X-RAY DIFFRACTION (2.45 Å) | 主引用文献 | Mechanism of C-Myb-C/Ebpbeta Cooperation from Separated Sites on a Promoter Cell(Cambridge,Mass.), 108, 2002
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