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6KAM
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BU of 6kam by Molmil
Crystal structure of FKRP in complex with Ba ion, CDP-ribtol, and sugar acceptor
分子名称: 2-acetamido-2-deoxy-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-alpha-D-mannopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, BARIUM ION, ...
著者Kuwabara, N.
登録日2019-06-23
公開日2020-01-15
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Crystal structures of fukutin-related protein (FKRP), a ribitol-phosphate transferase related to muscular dystrophy.
Nat Commun, 11, 2020
6KAK
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BU of 6kak by Molmil
Crystal structure of FKRP in complex with Mg ion
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fukutin-related protein, MAGNESIUM ION, ...
著者Kuwabara, N.
登録日2019-06-23
公開日2020-01-15
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.056 Å)
主引用文献Crystal structures of fukutin-related protein (FKRP), a ribitol-phosphate transferase related to muscular dystrophy.
Nat Commun, 11, 2020
6KAJ
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BU of 6kaj by Molmil
Crystal structure of FKRP in complex with Ba ion
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, BARIUM ION, CYTIDINE-5'-DIPHOSPHATE, ...
著者Kuwabara, N.
登録日2019-06-23
公開日2020-01-29
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.2249 Å)
主引用文献Crystal structures of fukutin-related protein (FKRP), a ribitol-phosphate transferase related to muscular dystrophy.
Nat Commun, 11, 2020
6KAL
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BU of 6kal by Molmil
Crystal structure of FKRP in complex with Mg ion and CMP
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CYTIDINE-5'-MONOPHOSPHATE, Fukutin-related protein, ...
著者Kuwabara, N.
登録日2019-06-23
公開日2020-01-15
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structures of fukutin-related protein (FKRP), a ribitol-phosphate transferase related to muscular dystrophy.
Nat Commun, 11, 2020
6KAN
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BU of 6kan by Molmil
Crystal structure of FKRP in complex with Ba ion
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, BARIUM ION, Fukutin-related protein, ...
著者Kuwabara, N.
登録日2019-06-23
公開日2020-01-15
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.251 Å)
主引用文献Crystal structures of fukutin-related protein (FKRP), a ribitol-phosphate transferase related to muscular dystrophy.
Nat Commun, 11, 2020
1BJW
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BU of 1bjw by Molmil
ASPARTATE AMINOTRANSFERASE FROM THERMUS THERMOPHILUS
分子名称: ASPARTATE AMINOTRANSFERASE, PHOSPHATE ION
著者Nakai, T, Okada, K, Kuramitsu, S, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1998-06-30
公開日1999-07-22
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of Thermus thermophilus HB8 aspartate aminotransferase and its complex with maleate.
Biochemistry, 38, 1999
1BKG
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BU of 1bkg by Molmil
ASPARTATE AMINOTRANSFERASE FROM THERMUS THERMOPHILUS WITH MALEATE
分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, ASPARTATE AMINOTRANSFERASE, MALEIC ACID
著者Nakai, T, Okada, K, Kuramitsu, S, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1998-07-07
公開日1999-07-22
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of Thermus thermophilus HB8 aspartate aminotransferase and its complex with maleate.
Biochemistry, 38, 1999
4Z4K
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BU of 4z4k by Molmil
Crystal structure of GFP-TAX1BP1 UBZ1+2 domain fusion protein
分子名称: Green fluorescent protein,Tax1-binding protein 1, ZINC ION
著者Rohaim, A, Kawasaki, M, Wakatsuki, S.
登録日2015-04-02
公開日2016-04-06
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A novel mode of ubiquitin recognition by the ubiquitin-binding zinc finger domain of WRNIP1.
Febs J., 283, 2016
4Z4M
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BU of 4z4m by Molmil
Crystal structure of GFP-TAX1BP1 UBZ2 domain fusion protein
分子名称: Green fluorescent protein,Tax1-binding protein 1, ZINC ION
著者Rohaim, A, Kawasaki, M, Wakatsuki, S.
登録日2015-04-02
公開日2016-04-06
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献A novel mode of ubiquitin recognition by the ubiquitin-binding zinc finger domain of WRNIP1.
Febs J., 283, 2016
7E9L
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BU of 7e9l by Molmil
Crystal Structure of POMGNT2 in complex with UDP and mono-mannosyl peptide (379Man short peptide)
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kuwabara, N.
登録日2021-03-04
公開日2021-05-05
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The structure of POMGNT2 provides new insights into the mechanism to determine the functional O-mannosylation site on alpha-dystroglycan.
Genes Cells, 26, 2021
7E9K
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BU of 7e9k by Molmil
Crystal Structure of POMGNT2 in complex with UDP and mono-mannosyl peptide (379Man long peptide)
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kuwabara, N.
登録日2021-03-04
公開日2021-05-05
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献The structure of POMGNT2 provides new insights into the mechanism to determine the functional O-mannosylation site on alpha-dystroglycan.
Genes Cells, 26, 2021
7E9J
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BU of 7e9j by Molmil
Crystal Structure of POMGNT2 in complex with UDP
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2, ...
著者Kuwabara, N.
登録日2021-03-04
公開日2021-05-05
最終更新日2021-07-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The structure of POMGNT2 provides new insights into the mechanism to determine the functional O-mannosylation site on alpha-dystroglycan.
Genes Cells, 26, 2021
2EIQ
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BU of 2eiq by Molmil
Design of Disulfide-linked Thioredoxin Dimers and Multimers Through Analysis of Crystal Contacts
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, Thioredoxin 1
著者Kobayashi, M.
登録日2007-03-13
公開日2007-09-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Design of Disulfide-linked Thioredoxin Dimers and Multimers Through Analysis of Crystal Contacts
J.Mol.Biol., 372, 2007
2EIR
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BU of 2eir by Molmil
Design of Disulfide-linked Thioredoxin Dimers and Multimers Through Analysis of Crystal Contacts
分子名称: COPPER (II) ION, Thioredoxin 1
著者Kobayashi, M.
登録日2007-03-13
公開日2007-09-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Design of Disulfide-linked Thioredoxin Dimers and Multimers Through Analysis of Crystal Contacts
J.Mol.Biol., 372, 2007
2EIO
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BU of 2eio by Molmil
Design of Disulfide-linked Thioredoxin Dimers and Multimers Through Analysis of Crystal Contacts
分子名称: Thioredoxin 1
著者Kobayashi, M.
登録日2007-03-13
公開日2007-09-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Design of Disulfide-linked Thioredoxin Dimers and Multimers Through Analysis of Crystal Contacts
J.Mol.Biol., 372, 2007
3AI4
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BU of 3ai4 by Molmil
Crystal structure of yeast enhanced green fluorescent protein - mouse polymerase iota ubiquitin binding motif fusion protein
分子名称: SULFATE ION, yeast enhanced green fluorescent protein,DNA polymerase iota
著者Suzuki, N, Wakatsuki, S, Kawasaki, M.
登録日2010-05-10
公開日2010-09-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystallization of small proteins assisted by green fluorescent protein
Acta Crystallogr.,Sect.D, 66, 2010
3AI5
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BU of 3ai5 by Molmil
Crystal structure of yeast enhanced green fluorescent protein-ubiquitin fusion protein
分子名称: 1,2-ETHANEDIOL, yeast enhanced green fluorescent protein,Ubiquitin
著者Suzuki, N, Wakatsuki, S, Kawasaki, M.
登録日2010-05-10
公開日2010-09-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystallization of small proteins assisted by green fluorescent protein
Acta Crystallogr.,Sect.D, 66, 2010
3BC1
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BU of 3bc1 by Molmil
Crystal Structure of the complex Rab27a-Slp2a
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Ras-related protein Rab-27A, ...
著者Chavas, L.M.G, Ihara, K, Kawasaki, M, Wakatsuki, S.
登録日2007-11-12
公開日2008-09-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Elucidation of Rab27 recruitment by its effectors: structure of Rab27a bound to Exophilin4/Slp2-a
Structure, 16, 2008
5BJ4
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BU of 5bj4 by Molmil
THERMUS THERMOPHILUS ASPARTATE AMINOTRANSFERASE TETRA MUTANT 2
分子名称: PHOSPHATE ION, PROTEIN (ASPARTATE AMINOTRANSFERASE), PYRIDOXAL-5'-PHOSPHATE
著者Ura, H, Nakai, T, Kawaguchi, S.I, Miyahara, I, Hirotsu, K, Kuramitsu, S.
登録日1999-01-11
公開日2003-09-02
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Substrate recognition mechanism of thermophilic dual-substrate enzyme
J.BIOCHEM.(TOKYO), 130, 2001
3VHS
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BU of 3vhs by Molmil
Crystal structure of UBZ of human WRNIP1
分子名称: ATPase WRNIP1, SODIUM ION, ZINC ION
著者Suzuki, N, Wakatsuki, S, Kawasaki, M.
登録日2011-09-06
公開日2012-10-10
最終更新日2016-06-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A novel mode of ubiquitin recognition by the ubiquitin-binding zinc finger domain of WRNIP1.
Febs J., 2016
3WD8
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BU of 3wd8 by Molmil
TypeIII polyketide synthases
分子名称: GLYCEROL, Type III polyketide synthase quinolone synthase
著者Mori, T, Shimokawa, Y, Matsui, T, Morita, H, Abe, I.
登録日2013-06-10
公開日2013-09-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.463 Å)
主引用文献Cloning, characterization, and crystal structure analysis of novel type III polyketide synthases from Citrus microcarpa
To be Published
3WUP
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BU of 3wup by Molmil
Crystal Structure of the Ubiquitin-Binding Zinc Finger (UBZ) Domain of the Human DNA Polymerase Eta
分子名称: CHLORIDE ION, DNA polymerase eta, GLYCEROL, ...
著者Suzuki, N, Wakatsuki, S, Kawasaki, S.
登録日2014-05-01
公開日2015-06-17
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A novel mode of ubiquitin recognition by the ubiquitin-binding zinc finger domain of WRNIP1.
Febs J., 283, 2016
3WV6
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BU of 3wv6 by Molmil
Crystal Structure of a protease-resistant mutant form of human galectin-9
分子名称: 1,2-ETHANEDIOL, Galectin-9, ZINC ION, ...
著者Yoshida, H, Kamitori, S.
登録日2014-05-16
公開日2015-05-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献X-ray structure of a protease-resistant mutant form of human galectin-9 having two carbohydrate recognition domains with a metal-binding site
Biochem.Biophys.Res.Commun., 490, 2017
3VHT
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BU of 3vht by Molmil
Crystal structure of GFP-Wrnip1 UBZ domain fusion protein in complex with ubiquitin
分子名称: Green fluorescent protein, Green fluorescent protein,ATPase WRNIP1, Ubiquitin, ...
著者Suzuki, N, Wakatsuki, S, Kawasaki, M.
登録日2011-09-06
公開日2012-10-10
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A novel mode of ubiquitin recognition by the ubiquitin-binding zinc finger domain of WRNIP1.
Febs J., 2016
1KZK
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BU of 1kzk by Molmil
JE-2147-HIV Protease Complex
分子名称: (4R)-3-{(2S,3S)-2-hydroxy-3-[(3-hydroxy-2-methylbenzoyl)amino]-4-phenylbutanoyl}-5,5-dimethyl-N-(2-methylbenzyl)-1,3-thiazolidine-4-carboxamide, 1,2-ETHANEDIOL, CHLORIDE ION, ...
著者Reiling, K.K, Endres, N.F, Dauber, D.S, Craik, C.S, Stroud, R.M.
登録日2002-02-06
公開日2002-04-03
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.09 Å)
主引用文献Anisotropic Dynamics of the JE-2147-HIV Protease Complex: Drug Resistance and Thermodynamic Binding Mode Examined in a 1.09 A Structure
Biochemistry, 41, 2002

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