2CZI
| Crystal structure of human myo-inositol monophosphatase 2 (IMPA2) with calcium and phosphate ions | 分子名称: | CALCIUM ION, Inositol monophosphatase 2, PHOSPHATE ION | 著者 | Arai, R, Ito, K, Ohnishi, T, Ohba, H, Yoshikawa, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2005-07-13 | 公開日 | 2006-07-25 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (3 Å) | 主引用文献 | Crystal structure of human myo-inositol monophosphatase 2, the product of the putative susceptibility gene for bipolar disorder, schizophrenia, and febrile seizures Proteins, 67, 2007
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2DDK
| Crystal structure of human myo-inositol monophosphatase 2 (IMPA2) (orthorhombic form) | 分子名称: | Inositol monophosphatase 2 | 著者 | Arai, R, Ito, K, Kamo-Uchikubo, T, Bessho, Y, Ohba, H, Ohnishi, T, Yoshikawa, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2006-01-30 | 公開日 | 2007-02-06 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Crystal structure of human myo-inositol monophosphatase 2, the product of the putative susceptibility gene for bipolar disorder, schizophrenia, and febrile seizures Proteins, 67, 2007
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2ECF
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2ZTU
| T190A mutant of D-3-hydroxybutyrate dehydrogenase complexed with NAD+ | 分子名称: | D(-)-3-hydroxybutyrate dehydrogenase, MAGNESIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE | 著者 | Nakashima, K, Nakajima, Y, Ito, K, Yoshimoto, T. | 登録日 | 2008-10-09 | 公開日 | 2009-08-25 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Closed complex of the D-3-hydroxybutyrate dehydrogenase induced by an enantiomeric competitive inhibitor. J.Biochem., 145, 2009
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3A6J
| E122Q mutant creatininase complexed with creatine | 分子名称: | Creatinine amidohydrolase, N-[(E)-AMINO(IMINO)METHYL]-N-METHYLGLYCINE, SULFATE ION, ... | 著者 | Nakajima, Y, Yamashita, K, Ito, K, Yoshimoto, T. | 登録日 | 2009-09-02 | 公開日 | 2010-02-09 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Substitution of Glu122 by glutamine revealed the function of the second water molecule as a proton donor in the binuclear metal enzyme creatininase J.Mol.Biol., 396, 2010
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3A6D
| Creatininase complexed with 1-methylguanidine | 分子名称: | 1-METHYLGUANIDINE, Creatinine amidohydrolase, MANGANESE (II) ION, ... | 著者 | Nakajima, Y, Yamashita, K, Ito, K, Yoshimoto, T. | 登録日 | 2009-08-31 | 公開日 | 2010-02-09 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Substitution of Glu122 by glutamine revealed the function of the second water molecule as a proton donor in the binuclear metal enzyme creatininase J.Mol.Biol., 396, 2010
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3VMF
| Archaeal protein | 分子名称: | Elongation factor 1-alpha, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... | 著者 | Kobayashi, K, Saito, K, Ishitani, R, Ito, K, Nureki, O. | 登録日 | 2011-12-12 | 公開日 | 2012-07-25 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Structural basis for translation termination by archaeal RF1 and GTP-bound EF1alpha complex Nucleic Acids Res., 40, 2012
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2ZTL
| Closed conformation of D-3-hydroxybutyrate dehydrogenase complexed with NAD+ and L-3-hydroxybutyrate | 分子名称: | (3S)-3-HYDROXYBUTANOIC ACID, D(-)-3-hydroxybutyrate dehydrogenase, GLYCEROL, ... | 著者 | Nakashima, K, Nakajima, Y, Ito, K, Yoshimoto, T. | 登録日 | 2008-10-07 | 公開日 | 2009-08-25 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Closed complex of the D-3-hydroxybutyrate dehydrogenase induced by an enantiomeric competitive inhibitor. J.Biochem., 145, 2009
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3A6L
| E122Q mutant creatininase, Zn-Zn type | 分子名称: | CHLORIDE ION, Creatinine amidohydrolase, ZINC ION | 著者 | Nakajima, Y, Yamashita, K, Ito, K, Yoshimoto, T. | 登録日 | 2009-09-02 | 公開日 | 2010-02-09 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Substitution of Glu122 by glutamine revealed the function of the second water molecule as a proton donor in the binuclear metal enzyme creatininase J.Mol.Biol., 396, 2010
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3A6E
| W174F mutant creatininase, type I | 分子名称: | CACODYLATE ION, Creatinine amidohydrolase, MANGANESE (II) ION, ... | 著者 | Nakajima, Y, Yamashita, K, Ito, K, Yoshimoto, T. | 登録日 | 2009-08-31 | 公開日 | 2010-02-09 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Substitution of Glu122 by glutamine revealed the function of the second water molecule as a proton donor in the binuclear metal enzyme creatininase J.Mol.Biol., 396, 2010
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3A6H
| W154A mutant creatininase | 分子名称: | CHLORIDE ION, Creatinine amidohydrolase, MANGANESE (II) ION, ... | 著者 | Nakajima, Y, Yamashita, K, Ito, K, Yoshimoto, T. | 登録日 | 2009-08-31 | 公開日 | 2010-02-09 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Substitution of Glu122 by glutamine revealed the function of the second water molecule as a proton donor in the binuclear metal enzyme creatininase J.Mol.Biol., 396, 2010
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3ASU
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2ZTV
| The binary complex of D-3-hydroxybutyrate dehydrogenase with NAD+ | 分子名称: | D(-)-3-hydroxybutyrate dehydrogenase, GLYCEROL, MAGNESIUM ION, ... | 著者 | Nakashima, K, Nakajima, Y, Ito, K, Yoshimoto, T. | 登録日 | 2008-10-09 | 公開日 | 2009-08-25 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.95 Å) | 主引用文献 | Closed complex of the D-3-hydroxybutyrate dehydrogenase induced by an enantiomeric competitive inhibitor. J.Biochem., 145, 2009
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3ASV
| The Closed form of serine dehydrogenase complexed with NADP+ | 分子名称: | NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PHOSPHATE ION, Short-chain dehydrogenase/reductase SDR | 著者 | Yamazawa, R, Nakajima, Y, Yoshimoto, T, Ito, K. | 登録日 | 2010-12-21 | 公開日 | 2011-10-12 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | Crystal structure of serine dehydrogenase from Escherichia coli: important role of the C-terminal region for closed-complex formation. J.Biochem., 149, 2011
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3A6K
| The E122Q mutant creatininase, Mn-Zn type | 分子名称: | CHLORIDE ION, Creatinine amidohydrolase, MANGANESE (II) ION, ... | 著者 | Nakajima, Y, Yamashita, K, Ito, K, Yoshimoto, T. | 登録日 | 2009-09-02 | 公開日 | 2010-02-09 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Substitution of Glu122 by glutamine revealed the function of the second water molecule as a proton donor in the binuclear metal enzyme creatininase J.Mol.Biol., 396, 2010
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2ZTM
| T190S mutant of D-3-hydroxybutyrate dehydrogenase | 分子名称: | (3S)-3-HYDROXYBUTANOIC ACID, D(-)-3-hydroxybutyrate dehydrogenase, MAGNESIUM ION, ... | 著者 | Nakashima, K, Nakajima, Y, Ito, K, Yoshimoto, T. | 登録日 | 2008-10-07 | 公開日 | 2009-08-25 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Closed complex of the D-3-hydroxybutyrate dehydrogenase induced by an enantiomeric competitive inhibitor. J.Biochem., 145, 2009
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3A6F
| W174F mutant creatininase, Type II | 分子名称: | CACODYLATE ION, Creatinine amidohydrolase, MANGANESE (II) ION, ... | 著者 | Nakajima, Y, Yamashita, K, Ito, K, Yoshimoto, T. | 登録日 | 2009-08-31 | 公開日 | 2010-02-09 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (1.78 Å) | 主引用文献 | Substitution of Glu122 by glutamine revealed the function of the second water molecule as a proton donor in the binuclear metal enzyme creatininase J.Mol.Biol., 396, 2010
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3A6G
| W154F mutant creatininase | 分子名称: | Creatinine amidohydrolase, MANGANESE (II) ION, ZINC ION | 著者 | Nakajima, Y, Yamashita, K, Ito, K, Yoshimoto, T. | 登録日 | 2009-08-31 | 公開日 | 2010-02-09 | 最終更新日 | 2023-11-01 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Substitution of Glu122 by glutamine revealed the function of the second water molecule as a proton donor in the binuclear metal enzyme creatininase J.Mol.Biol., 396, 2010
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2CZ5
| Crystal structure of orotidine 5'-phosphate decarboxylase from Pyrococcus horikoshii OT3 | 分子名称: | CITRIC ACID, GLYCEROL, Orotidine 5'-phosphate decarboxylase | 著者 | Arai, R, Ito, K, Kamo-Uchikubo, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2005-07-11 | 公開日 | 2006-01-11 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.85 Å) | 主引用文献 | Crystal structure of orotidine 5'-phosphate decarboxylase from Pyrococcus horikoshii OT3 To be Published
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1KOL
| Crystal structure of formaldehyde dehydrogenase | 分子名称: | NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION, ZINC ION, ... | 著者 | Tanaka, N, Kusakabe, Y, Ito, K, Yoshimoto, T, Nakamura, K.T. | 登録日 | 2001-12-21 | 公開日 | 2002-12-11 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.65 Å) | 主引用文献 | Crystal Structure of Formaldehyde Dehydrogenase from Pseudomonas putida: the Structural Origin of the Tightly Bound Cofactor in Nicotinoprotein Dehydrogenases J.mol.biol., 324, 2002
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2EEP
| Prolyl Tripeptidyl Aminopeptidase Complexed with an Inhibitor | 分子名称: | Dipeptidyl aminopeptidase IV, putative, SULFATE ION, ... | 著者 | Xu, Y, Nakajima, Y, Ito, K, Yoshimoto, T. | 登録日 | 2007-02-16 | 公開日 | 2008-02-19 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | Novel inhibitor for prolyl tripeptidyl aminopeptidase from Porphyromonas gingivalis and details of substrate-recognition mechanism J.Mol.Biol., 375, 2008
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2CZE
| Crystal structure of orotidine 5'-phosphate decarboxylase from Pyrococcus horikoshii OT3 complexed with UMP | 分子名称: | CITRIC ACID, GLYCEROL, Orotidine 5'-phosphate decarboxylase, ... | 著者 | Arai, R, Ito, K, Kishishita, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2005-07-13 | 公開日 | 2006-01-13 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.85 Å) | 主引用文献 | Crystal structure of orotidine 5'-phosphate decarboxylase from Pyrococcus horikoshii OT3 complexed with UMP To be Published
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1J2T
| Creatininase Mn | 分子名称: | MANGANESE (II) ION, SULFATE ION, ZINC ION, ... | 著者 | Yoshimoto, T, Tanaka, N, Kanada, N, Inoue, T, Nakajima, Y, Haratake, M, Nakamura, K.T, Xu, Y, Ito, K. | 登録日 | 2003-01-11 | 公開日 | 2004-01-27 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Crystal structures of creatininase reveal the substrate binding site and provide an insight into the catalytic mechanism J.Mol.Biol., 337, 2004
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2CZD
| Crystal structure of orotidine 5'-phosphate decarboxylase from Pyrococcus horikoshii OT3 at 1.6 A resolution | 分子名称: | 2,3-DIHYDROXY-1,4-DITHIOBUTANE, GLYCEROL, Orotidine 5'-phosphate decarboxylase | 著者 | Arai, R, Ito, K, Kamo-Uchikubo, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2005-07-13 | 公開日 | 2006-01-13 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | 主引用文献 | Crystal structure of orotidine 5'-phosphate decarboxylase from Pyrococcus horikoshii OT3 at 1.6 A resolution To be Published
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1J2U
| Creatininase Zn | 分子名称: | SULFATE ION, ZINC ION, creatinine amidohydrolase | 著者 | Yoshimoto, T, Tanaka, N, Kanada, N, Inoue, T, Nakajima, Y, Haratake, M, Nakamura, K.T, Xu, Y, Ito, K. | 登録日 | 2003-01-11 | 公開日 | 2004-01-27 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (1.85 Å) | 主引用文献 | Crystal structures of creatininase reveal the substrate binding site and provide an insight into the catalytic mechanism J.Mol.Biol., 337, 2004
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