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The structure of salutaridine reductase from Papaver somniferum.
分子名称:	NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Salutaridine reductase
著者	Higashi, Y, Kutchen, T.M, Smith, T.J.
登録日	2010-07-22
公開日	2010-12-15
最終更新日	2011-07-13
実験手法	X-RAY DIFFRACTION (1.91 Å)
主引用文献	The atomic structure of salutaridine reductase from the opium poppy Papaver somniferum. J.Biol.Chem., 66, 2010

7R8I

Crystal structure of Pseudooceanicola lipolyticus Argonaute bound to 5' OH guide DNA in the presence of Mg2+
分子名称:	Argonaute, DNA (5'-D(TPTPAPCPTPGPCPAPCPAPGPGPTPGPAPCPGPA), MAGNESIUM ION
著者	Shin, Y, Murakami, K.S.
登録日	2021-06-26
公開日	2022-11-09
最終更新日	2024-05-22
実験手法	X-RAY DIFFRACTION (2.4 Å)
主引用文献	Crystal structure of Pseudooceanicola lipolyticus Argonaute bound to 5' OH guide DNA in the presence of Mg2+ To be published

1JDA

MALTOTETRAOSE-FORMING EXO-AMYLASE
分子名称:	1,4-ALPHA MALTOTETRAHYDROLASE, CALCIUM ION
著者	Yoshioka, Y, Hasegawa, K, Matsuura, Y, Katsube, Y, Kubota, M.
登録日	1997-06-16
公開日	1997-10-15
最終更新日	2021-11-03
実験手法	X-RAY DIFFRACTION (2.2 Å)
主引用文献	Crystal structures of a mutant maltotetraose-forming exo-amylase cocrystallized with maltopentaose. J.Mol.Biol., 271, 1997

1JDC

MUTANT (E219Q) MALTOTETRAOSE-FORMING EXO-AMYLASE COCRYSTALLIZED WITH MALTOTETRAOSE (CRYSTAL TYPE 1)
分子名称:	1,4-ALPHA MALTOTETRAHYDROLASE, CALCIUM ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者	Yoshioka, Y, Hasegawa, K, Matsuura, Y, Katsube, Y, Kubota, M.
登録日	1997-06-16
公開日	1997-10-15
最終更新日	2021-11-03
実験手法	X-RAY DIFFRACTION (1.9 Å)
主引用文献	Crystal structures of a mutant maltotetraose-forming exo-amylase cocrystallized with maltopentaose. J.Mol.Biol., 271, 1997

1JDD

MUTANT (E219Q) MALTOTETRAOSE-FORMING EXO-AMYLASE COCRYSTALLIZED WITH MALTOTETRAOSE (CRYSTAL TYPE 2)
分子名称:	1,4-ALPHA MALTOTETRAHYDROLASE, CALCIUM ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者	Yoshioka, Y, Hasegawa, K, Matsuura, Y, Katsube, Y, Kubota, M.
登録日	1997-06-16
公開日	1997-10-15
最終更新日	2021-11-03
実験手法	X-RAY DIFFRACTION (1.9 Å)
主引用文献	Crystal structures of a mutant maltotetraose-forming exo-amylase cocrystallized with maltopentaose. J.Mol.Biol., 271, 1997

3KDO

Crystal structure of Type III Rubisco SP6 mutant complexed with 2-CABP
分子名称:	2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase
著者	Nishitani, Y, Fujihashi, M, Doi, T, Yoshida, S, Atomi, H, Imanaka, T, Miki, K.
登録日	2009-10-23
公開日	2010-10-06
最終更新日	2023-11-22
実験手法	X-RAY DIFFRACTION (2.36 Å)
主引用文献	Structure-based catalytic optimization of a type III Rubisco from a hyperthermophile J.Biol.Chem., 285, 2010

3KDN

Crystal structure of Type III Rubisco SP4 mutant complexed with 2-CABP
分子名称:	2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, Ribulose bisphosphate carboxylase
著者	Nishitani, Y, Fujihashi, M, Doi, T, Yoshida, S, Atomi, H, Imanaka, T, Miki, K.
登録日	2009-10-23
公開日	2010-10-06
最終更新日	2023-11-22
実験手法	X-RAY DIFFRACTION (2.09 Å)
主引用文献	Structure-based catalytic optimization of a type III Rubisco from a hyperthermophile J.Biol.Chem., 285, 2010

7YBC

Aspartyl/Asparaginyl beta-hydroxylase (AspH) oxygenase and TPR domains in complex with (S)-4-hydroxy-4-methyl-2-oxoglutarate and factor X-derived peptide (39mer-4Ser)
分子名称:	(2~{S})-2-methyl-2-oxidanyl-4-oxidanylidene-pentanedioic acid, Aspartyl/asparaginyl beta-hydroxylase, Coagulation factor X, ...
著者	Nakashima, Y, Brewitz, L, Schofield, C.J.
登録日	2022-06-29
公開日	2023-07-05
最終更新日	2024-10-09
実験手法	X-RAY DIFFRACTION (1.84 Å)
主引用文献	Aspartyl/Asparaginyl beta-hydroxylase (AspH) oxygenase and TPR domains in complex with (S)-4-hydroxy-4-methyl-2-oxoglutarate and factor X-derived peptide (39mer-4Ser) To Be Published

7YB8

Aspartyl/Asparaginyl beta-hydroxylase (AspH) oxygenase and TPR domains in complex with D-2-hydroxyglutarate and factor X-derived peptide (39mer-4Ser)
分子名称:	(2R)-2-hydroxypentanedioic acid, Aspartyl/asparaginyl beta-hydroxylase, Coagulation factor X, ...
著者	Nakashima, Y, Brewitz, L, Schofield, C.J.
登録日	2022-06-29
公開日	2023-07-05
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (1.98 Å)
主引用文献	Aspartyl/Asparaginyl beta-hydroxylase (AspH) oxygenase and TPR domains in complex with D-2-hydroxyglutarate and factor X-derived peptide (39mer-4Ser) To Be Published

7YBB

Aspartyl/Asparaginyl beta-hydroxylase (AspH) oxygenase and TPR domains in complex with D-4-hydroxy-2-oxoglutarate and factor X-derived peptide (39mer-4Ser)
分子名称:	(2~{R})-2-oxidanyl-4-oxidanylidene-pentanedioic acid, Aspartyl/asparaginyl beta-hydroxylase, Coagulation factor X, ...
著者	Nakashima, Y, Brewitz, L, Schofield, C.J.
登録日	2022-06-29
公開日	2023-07-05
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (1.68 Å)
主引用文献	Aspartyl/Asparaginyl beta-hydroxylase (AspH) oxygenase and TPR domains in complex with D-4-hydroxy-2-oxoglutarate and factor X-derived peptide (39mer-4Ser) To Be Published

7YBA

Aspartyl/Asparaginyl beta-hydroxylase (AspH) oxygenase and TPR domains in complex with D-4-hydroxy-2-oxoglutarate
分子名称:	(2~{R})-2-oxidanyl-4-oxidanylidene-pentanedioic acid, Aspartyl/asparaginyl beta-hydroxylase, MANGANESE (II) ION
著者	Nakashima, Y, Brewitz, L, Schofield, C.J.
登録日	2022-06-29
公開日	2023-07-05
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (1.86 Å)
主引用文献	Aspartyl/Asparaginyl beta-hydroxylase (AspH) oxygenase and TPR domains in complex with D-4-hydroxy-2-oxoglutarate To Be Published

7YB9

Aspartyl/Asparaginyl beta-hydroxylase (AspH) oxygenase and TPR domains in complex with L-2-hydroxyglutarate and factor X-derived peptide (39mer-4Ser)
分子名称:	(2S)-2-HYDROXYPENTANEDIOIC ACID, Aspartyl/asparaginyl beta-hydroxylase, Coagulation factor X, ...
著者	Nakashima, Y, Brewitz, L, Schofield, C.J.
登録日	2022-06-29
公開日	2023-07-05
最終更新日	2023-11-29
実験手法	X-RAY DIFFRACTION (1.54 Å)
主引用文献	Aspartyl/Asparaginyl beta-hydroxylase (AspH) oxygenase and TPR domains in complex with L-2-hydroxyglutarate and factor X-derived peptide (39mer-4Ser) To Be Published

1IZ0

Crystal Structures of the Quinone Oxidoreductase from Thermus thermophilus HB8 and Its Complex with NADPH
分子名称:	QUINONE OXIDOREDUCTASE, SULFATE ION
著者	Shimomura, Y, Kakuta, Y, Fukuyama, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日	2002-09-17
公開日	2003-07-15
最終更新日	2023-12-27
実験手法	X-RAY DIFFRACTION (2.3 Å)
主引用文献	Crystal Structures of the Quinone Oxidoreductase from Thermus thermophilus HB8 and Its Complex with NADPH: Implication for NADPH and Substrate Recognition J.Bacteriol., 185, 2003

2RSE

NMR structure of FKBP12-mTOR FRB domain-rapamycin complex structure determined based on PCS
分子名称:	Peptidyl-prolyl cis-trans isomerase FKBP1A, Serine/threonine-protein kinase mTOR, TERBIUM(III) ION
著者	Kobashigawa, Y, Ushio, M, Saio, T, Inagaki, F.
登録日	2012-01-25
公開日	2012-05-30
最終更新日	2024-05-15
実験手法	SOLUTION NMR
主引用文献	Convenient method for resolving degeneracies due to symmetry of the magnetic susceptibility tensor and its application to pseudo contact shift-based protein-protein complex structure determination. J.Biomol.Nmr, 53, 2012

1IYZ

Crystal Structures of the Quinone Oxidoreductase from Thermus thermophilus HB8 and Its Complex with NADPH
分子名称:	NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, QUINONE OXIDOREDUCTASE
著者	Shimomura, Y, Kakuta, Y, Fukuyama, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日	2002-09-17
公開日	2003-07-15
最終更新日	2023-12-27
実験手法	X-RAY DIFFRACTION (2.8 Å)
主引用文献	Crystal Structures of the Quinone Oxidoreductase from Thermus thermophilus HB8 and Its Complex with NADPH: Implication for NADPH and Substrate Recognition J.Bacteriol., 185, 2003

3VLU

Crystal structure of Sphingomonas sp. A1 alginate-binding protein AlgQ1 in complex with saturated trimannuronate
分子名称:	AlgQ1, CALCIUM ION, beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid
著者	Nishitani, Y, Maruyama, Y, Itoh, T, Mikami, B, Hashimoto, W, Murata, K.
登録日	2011-12-05
公開日	2012-01-25
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (1.55 Å)
主引用文献	Recognition of heteropolysaccharide alginate by periplasmic solute-binding proteins of a bacterial ABC transporter Biochemistry, 51, 2012

3VLV

Crystal structure of Sphingomonas sp. A1 alginate-binding ptotein AlgQ1 in complex with unsaturated triguluronate
分子名称:	4-deoxy-alpha-L-erythro-hex-4-enopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid, AlgQ1, CALCIUM ION
著者	Nishitani, Y, Maruyama, Y, Itoh, T, Mikami, B, Hashimoto, W, Murata, K.
登録日	2011-12-05
公開日	2012-01-25
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (1.5 Å)
主引用文献	Recognition of heteropolysaccharide alginate by periplasmic solute-binding proteins of a bacterial ABC transporter Biochemistry, 51, 2012

5DIC

Fatty acid binding protein OBP56a from the oral disk of the blowfly Phormia regina
分子名称:	Odorant-binding protein, PALMITIC ACID
著者	Ishida, Y, Leal, W.S, Wilson, D.K.
登録日	2015-08-31
公開日	2016-10-05
実験手法	X-RAY DIFFRACTION (1.185 Å)
主引用文献	In preparation To Be Published

3VLW

Crystal structure of Sphingomonas sp. A1 alginate-binding protein AlgQ1 in complex with mannuronate-guluronate disaccharide
分子名称:	AlgQ1, CALCIUM ION, GLYCEROL, ...
著者	Nishitani, Y, Maruyama, Y, Itoh, T, Mikami, B, Hashimoto, W, Murata, K.
登録日	2011-12-05
公開日	2012-01-25
最終更新日	2023-11-08
実験手法	X-RAY DIFFRACTION (2 Å)
主引用文献	Recognition of heteropolysaccharide alginate by periplasmic solute-binding proteins of a bacterial ABC transporter Biochemistry, 51, 2012

8JX2

alpha-Hemolysin(G122S/K147R)-SpyTag/SpyCatcher head to head 14-mer
分子名称:	alpha hemolysin fused with spy-catcher, alpha hemolysin fused with spy-tag
著者	Ishii, Y, Naito, K, Yokoyama, T, Tanaka, Y, Matsuura, T.
登録日	2023-06-30
公開日	2024-07-03
実験手法	ELECTRON MICROSCOPY (2.2 Å)
主引用文献	alpha-Hemolysin(G122S/K147R)-SpyTag/SpyCatcher head to head 14-mer To Be Published

8JX3

alpha-Hemolysin(G122S/K147R/K237C)-SpyTag/SpyCatcher head to head 14-mer
分子名称:	alpha hemolysin fused with spy-catcher, alpha hemolysin fused with spy-tag
著者	Ishii, Y, Naito, K, Yokoyama, T, Tanaka, Y, Matsuura, T.
登録日	2023-06-30
公開日	2024-07-03
実験手法	ELECTRON MICROSCOPY (2.2 Å)
主引用文献	alpha-Hemolysin(G122S/K147R)-SpyTag/SpyCatcher head to head 14-mer To Be Published

5ZQU

Crystal structure of tetrameric RXRalpha-LBD complexed with partial agonist CBt-PMN
分子名称:	1-(3,5,5,8,8-pentamethyl-6,7-dihydronaphthalen-2-yl)benzotriazole-5-carboxylic acid, BROMIDE ION, Retinoic acid receptor RXR-alpha
著者	Miyashita, Y, Numoto, N, Arulmozhiraja, S, Nakano, S, Matsuo, N, Shimizu, K, Kakuta, H, Ito, S, Ikura, T, Ito, N, Tokiwa, H.
登録日	2018-04-20
公開日	2019-02-27
最終更新日	2023-11-22
実験手法	X-RAY DIFFRACTION (2.60038781 Å)
主引用文献	Dual conformation of the ligand induces the partial agonistic activity of retinoid X receptor alpha (RXR alpha ). FEBS Lett., 593, 2019

6AJN

Crystal structure of AtaTR bound with AcCoA
分子名称:	ACETYL COENZYME *A, DUF1778 domain-containing protein, N-acetyltransferase
著者	Yashiro, Y, Yamashita, S, Tomita, K.
登録日	2018-08-28
公開日	2019-01-02
最終更新日	2023-11-22
実験手法	X-RAY DIFFRACTION (3.302 Å)
主引用文献	Crystal Structure of the Enterohemorrhagic Escherichia coli AtaT-AtaR Toxin-Antitoxin Complex. Structure, 27, 2019

6AJM

Crystal structure of apo AtaTR
分子名称:	DUF1778 domain-containing protein, N-acetyltransferase, TRIETHYLENE GLYCOL
著者	Yashiro, Y, Yamashita, S, Tomita, K.
登録日	2018-08-28
公開日	2019-01-02
最終更新日	2023-11-22
実験手法	X-RAY DIFFRACTION (2.604 Å)
主引用文献	Crystal Structure of the Enterohemorrhagic Escherichia coli AtaT-AtaR Toxin-Antitoxin Complex. Structure, 27, 2019

1PFK

CRYSTAL STRUCTURE OF THE COMPLEX OF PHOSPHOFRUCTOKINASE FROM ESCHERICHIA COLI WITH ITS REACTION PRODUCTS
分子名称:	1,6-di-O-phosphono-beta-D-fructofuranose, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者	Shirakihara, Y, Evans, P.R.
登録日	1988-01-25
公開日	1989-01-09
最終更新日	2024-02-14
実験手法	X-RAY DIFFRACTION (2.4 Å)
主引用文献	Crystal structure of the complex of phosphofructokinase from Escherichia coli with its reaction products. J.Mol.Biol., 204, 1988

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