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5VAM
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BU of 5vam by Molmil
BRAF in Complex with RAF709
分子名称: N-{2-methyl-5'-(morpholin-4-yl)-6'-[(oxan-4-yl)oxy][3,3'-bipyridin]-5-yl}-3-(trifluoromethyl)benzamide, Serine/threonine-protein kinase B-raf
著者Mamo, M, Appleton, B.A.
登録日2017-03-27
公開日2017-06-28
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Design and Discovery of N-(2-Methyl-5'-morpholino-6'-((tetrahydro-2H-pyran-4-yl)oxy)-[3,3'-bipyridin]-5-yl)-3-(trifluoromethyl)benzamide (RAF709): A Potent, Selective, and Efficacious RAF Inhibitor Targeting RAS Mutant Cancers.
J. Med. Chem., 60, 2017
8I13
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BU of 8i13 by Molmil
Cryo-EM structure of 6-subunit Smc5/6
分子名称: MMS21 isoform 1, NSE3 isoform 1, Non-structural maintenance of chromosomes element 1 homolog, ...
著者Qian, L, Jun, Z, Xiang, Z, Cheng, T, Zhaoning, W, Duo, J, Zhenguo, C, Wang, L.
登録日2023-01-12
公開日2024-06-26
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (6.9 Å)
主引用文献Cryo-EM structures of Smc5/6 in multiple states reveal its assembly and functional mechanisms.
Nat.Struct.Mol.Biol., 2024
8I4V
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BU of 8i4v by Molmil
Cryo-EM structure of 5-subunit Smc5/6 arm region
分子名称: DNA repair protein KRE29, E3 SUMO-protein ligase MMS21, Structural maintenance of chromosomes protein 5, ...
著者Qian, L, Jun, Z, Xiang, Z, Cheng, T, Zhaoning, W, Zhenguo, C, Wang, L.
登録日2023-01-21
公開日2024-06-26
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (5.97 Å)
主引用文献Cryo-EM structures of Smc5/6 in multiple states reveal its assembly and functional mechanisms.
Nat.Struct.Mol.Biol., 2024
8I4X
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BU of 8i4x by Molmil
Cryo-EM structure of 5-subunit Smc5/6
分子名称: E3 SUMO-protein ligase MMS21, Non-structural maintenance of chromosome element 5, Nse6, ...
著者Qian, L, Jun, Z, Xiang, Z, Zhaoning, W, Tong, C, Duo, J, Zhenguo, C, Wang, L.
登録日2023-01-21
公開日2024-06-26
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (8.5 Å)
主引用文献Cryo-EM structures of Smc5/6 in multiple states reveal its assembly and functional mechanisms.
Nat.Struct.Mol.Biol., 2024
8I4W
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BU of 8i4w by Molmil
Cryo-EM structure of 5-subunit Smc5/6 head region
分子名称: DNA repair protein KRE29, Non-structural maintenance of chromosome element 5, Structural maintenance of chromosomes protein 5, ...
著者Qian, L, Jun, Z, Xiang, Z, Zhaoning, W, Cheng, T, Duo, J, Zhenguo, C, Wang, L.
登録日2023-01-21
公開日2024-06-26
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (6.01 Å)
主引用文献Cryo-EM structures of Smc5/6 in multiple states reveal its assembly and functional mechanisms.
Nat.Struct.Mol.Biol., 2024
1ZO4
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BU of 1zo4 by Molmil
Crystal Structure Of A328S Mutant Of The Heme Domain Of P450BM-3
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Bifunctional P-450:NADPH-P450 reductase, GLYCEROL, ...
著者Hegda, A, Chen, B, Haines, D.C, Bondlela, M, Mullin, D, Graham, S.E, Tomchick, D.R, Machius, M, Peterson, J.A.
登録日2005-05-12
公開日2006-08-01
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献A single active-site mutation of P450BM-3 dramatically enhances substrate binding and rate of product formation.
Biochemistry, 50, 2011
8HGR
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BU of 8hgr by Molmil
The apo-flavodoxin monomer from Synechococcus elongatus PCC 7942
分子名称: CHLORIDE ION, Flavodoxin, MAGNESIUM ION
著者Liu, S.W, Chen, Y.Y, Gong, Y, Cao, P.
登録日2022-11-15
公開日2022-12-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献A dimer-monomer transition captured by the crystal structures of cyanobacterial apo flavodoxin.
Biochem.Biophys.Res.Commun., 639, 2022
3X2F
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BU of 3x2f by Molmil
A Thermophilic S-Adenosylhomocysteine Hydrolase
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Adenosylhomocysteinase, NITRATE ION, ...
著者Zheng, Y, Ko, T.P, Huang, C.H.
登録日2014-12-21
公開日2015-05-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Crystal structures of S-adenosylhomocysteine hydrolase from the thermophilic bacterium Thermotoga maritima.
J.Struct.Biol., 190, 2015
5VAL
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BU of 5val by Molmil
BRAF in Complex with N-(3-(tert-butyl)phenyl)-4-methyl-3-(6-morpholinopyrimidin-4-yl)benzamide
分子名称: N-(3-tert-butylphenyl)-4-methyl-3-[6-(morpholin-4-yl)pyrimidin-4-yl]benzamide, Serine/threonine-protein kinase B-raf
著者Mamo, M, Appleton, B.A.
登録日2017-03-27
公開日2017-06-28
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献Design and Discovery of N-(2-Methyl-5'-morpholino-6'-((tetrahydro-2H-pyran-4-yl)oxy)-[3,3'-bipyridin]-5-yl)-3-(trifluoromethyl)benzamide (RAF709): A Potent, Selective, and Efficacious RAF Inhibitor Targeting RAS Mutant Cancers.
J. Med. Chem., 60, 2017
3WGI
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BU of 3wgi by Molmil
Crystal structure of RSP in complex with beta-NAD+ and operator DNA
分子名称: DNA (5'-D(*TP*AP*GP*AP*TP*TP*GP*TP*TP*AP*AP*TP*CP*GP*AP*TP*TP*AP*AP*CP*AP*AP*TP*C)-3'), NICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM), Redox-sensing transcriptional repressor rex
著者Zheng, Y, Ko, T.-P, Guo, R.-T.
登録日2013-08-05
公開日2014-08-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Distinct structural features of Rex-family repressors to sense redox levels in anaerobes and aerobes.
J.Struct.Biol., 188, 2014
2LQZ
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BU of 2lqz by Molmil
Structure of the RNA claw of the DNA packaging motor of bacteriophage 29
分子名称: RNA (27-MER)
著者Harjes, E.J, Matsuo, H.J, Kitamura, A.J.
登録日2012-03-19
公開日2012-08-01
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of the RNA claw of the DNA packaging motor of bacteriophage 29.
Nucleic Acids Res., 40, 2012
3WGG
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BU of 3wgg by Molmil
Crystal structure of RSP in complex with alpha-NAD+
分子名称: Redox-sensing transcriptional repressor rex, SULFATE ION, alpha-Diphosphopyridine nucleotide
著者Zheng, Y, Ko, T.-P, Guo, R.-T.
登録日2013-08-05
公開日2014-08-13
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Binding mode of the oxidized alpha-anomer of NAD(+) to RSP, a Rex-family repressor
Biochem.Biophys.Res.Commun., 456, 2015
3X2E
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BU of 3x2e by Molmil
A thermophilic hydrolase
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Adenosylhomocysteinase
著者Zheng, Y, Ko, T.P, Huang, C.H.
登録日2014-12-21
公開日2015-05-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Crystal structures of S-adenosylhomocysteine hydrolase from the thermophilic bacterium Thermotoga maritima.
J.Struct.Biol., 190, 2015
1ZOA
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BU of 1zoa by Molmil
Crystal Structure Of A328V Mutant Of The Heme Domain Of P450Bm-3 With N-Palmitoylglycine
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Bifunctional P-450:NADPH-P450 reductase, GLYCEROL, ...
著者Hegda, A, Chen, B, Haines, D.C, Bondlela, M, Mullin, D, Graham, S.E, Tomchick, D.R, Machius, M, Peterson, J.A.
登録日2005-05-12
公開日2006-08-01
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献A single active-site mutation of P450BM-3 dramatically enhances substrate binding and rate of product formation.
Biochemistry, 50, 2011
8WBB
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BU of 8wbb by Molmil
CryoEM structure of non-structural protein 1 dimer from dengue virus type 4
分子名称: Genome polyprotein
著者Jiao, H.Z, Pan, Q, Hu, H.L.
登録日2023-09-09
公開日2024-05-22
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献The step-by-step assembly mechanism of secreted flavivirus NS1 tetramer and hexamer captured at atomic resolution.
Sci Adv, 10, 2024
8WBE
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BU of 8wbe by Molmil
CryoEM structure of non-structural protein 1 hexamer 2 from dengue virus type 4
分子名称: Non-structural protein 1
著者Jiao, H.Z, Pan, Q, Hu, H.L.
登録日2023-09-09
公開日2024-05-22
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献The step-by-step assembly mechanism of secreted flavivirus NS1 tetramer and hexamer captured at atomic resolution.
Sci Adv, 10, 2024
8WBC
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BU of 8wbc by Molmil
CryoEM structure of non-structural protein 1 tetramer from dengue virus type 4
分子名称: Genome polyprotein
著者Jiao, H.Z, Pan, Q, Hu, H.L.
登録日2023-09-09
公開日2024-05-22
実験手法ELECTRON MICROSCOPY (3.03 Å)
主引用文献The step-by-step assembly mechanism of secreted flavivirus NS1 tetramer and hexamer captured at atomic resolution.
Sci Adv, 10, 2024
8WBD
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BU of 8wbd by Molmil
CryoEM structure of non-structural protein 1 hexamer 1 from dengue virus type 4
分子名称: Genome polyprotein, TRISTEAROYLGLYCEROL
著者Jiao, H.Z, Pan, Q, Hu, H.L.
登録日2023-09-09
公開日2024-05-22
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献The step-by-step assembly mechanism of secreted flavivirus NS1 tetramer and hexamer captured at atomic resolution.
Sci Adv, 10, 2024
3KM4
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BU of 3km4 by Molmil
Optimization of Orally Bioavailable Alkyl Amine Renin Inhibitors
分子名称: (3R)-3-[(1S)-4-(acetylamino)-1-(3-chlorophenyl)-1-hydroxybutyl]-N-{(1S)-2-cyclohexyl-1-[(methylamino)methyl]ethyl}piperidine-1-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Wu, Z, McKeever, B.M.
登録日2009-11-09
公開日2010-01-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Optimization of orally bioavailable alkyl amine renin inhibitors.
Bioorg.Med.Chem.Lett., 20, 2010
7JQQ
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BU of 7jqq by Molmil
The bacteriophage Phi-29 viral genome packaging motor assembly
分子名称: DNA (60-MER), DNA packaging protein, MAGNESIUM ION, ...
著者White, M.A, Woodson, M, Morais, M.C.
登録日2020-08-11
公開日2021-05-19
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献A viral genome packaging motor transitions between cyclic and helical symmetry to translocate dsDNA.
Sci Adv, 7, 2021
3Q5H
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BU of 3q5h by Molmil
Clinically Useful Alkyl Amine Renin Inhibitors
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Renin, ...
著者Wu, Z, McKeever, B.M.
登録日2010-12-28
公開日2011-11-30
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Discovery of VTP-27999, an Alkyl Amine Renin Inhibitor with Potential for Clinical Utility.
ACS Med Chem Lett, 2, 2011
3LRA
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BU of 3lra by Molmil
Structural Basis for Assembling a Human Tripartite Complex Dlg1-MPP7-Mals3
分子名称: Disks large homolog 1, MAGUK p55 subfamily member 7, Protein lin-7 homolog C
著者Yang, X, Xie, X, Shen, Y, Long, J.
登録日2010-02-10
公開日2010-11-17
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structural basis for tandem L27 domain-mediated polymerization
Faseb J., 24, 2010
4L58
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BU of 4l58 by Molmil
Crystal structure of the MLL5 PHD finger in complex with H3K4me3
分子名称: Histone H3 peptide, Histone-lysine N-methyltransferase MLL5, ZINC ION
著者Tong, Q, Ali, M, Kutateladze, T.G.
登録日2013-06-10
公開日2013-06-26
最終更新日2013-07-24
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Molecular basis for chromatin binding and regulation of MLL5.
Proc.Natl.Acad.Sci.USA, 110, 2013
5GPD
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BU of 5gpd by Molmil
Crystal structure of the binding domain of SREBP from fission yeast
分子名称: Sterol regulatory element-binding protein 1
著者Gong, X, Qian, H.W, Wu, J.P, Yan, N.
登録日2016-08-01
公開日2016-11-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.501 Å)
主引用文献Complex structure of the fission yeast SREBP-SCAP binding domains reveals an oligomeric organization
Cell Res., 26, 2016
5GRS
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BU of 5grs by Molmil
Complex structure of the fission yeast SREBP-SCAP binding domains
分子名称: Sterol regulatory element-binding protein 1, Sterol regulatory element-binding protein cleavage-activating protein
著者Gong, X, Qian, H.W, Wu, J.P, Yan, N.
登録日2016-08-12
公開日2016-12-14
最終更新日2019-10-23
実験手法ELECTRON MICROSCOPY (5.4 Å)
主引用文献Complex structure of the fission yeast SREBP-SCAP binding domains reveals an oligomeric organization
Cell Res., 26, 2016

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