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3CM0
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Crystal structure of adenylate kinase from Thermus thermophilus HB8
分子名称: Adenylate kinase
著者Nakagawa, N, Kondo, N, Masui, R, Matsuda, Z, Iwamoto, I, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-03-20
公開日2008-09-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of adenylate kinase from Thermus thermophilus HB8
To be Published
3CPQ
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BU of 3cpq by Molmil
Crystal Structure of L30e a ribosomal protein from Methanocaldococcus jannaschii DSM2661 (MJ1044)
分子名称: 50S ribosomal protein L30e
著者Jeyakanthan, J, Sarani, R, Mridula, P, Sekar, K, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2008-04-01
公開日2009-04-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of L30e a ribosomal protein from Methanocaldococcus jannaschii DSM2661 (MJ1044)
To be Published
3GFJ
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BU of 3gfj by Molmil
Crystal structure of the ST1710 mutant (R89A) protein
分子名称: 146aa long hypothetical transcriptional regulator, CALCIUM ION
著者Kumarevel, T, Tanaka, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-02-27
公開日2009-08-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献ST1710-DNA complex crystal structure reveals the DNA binding mechanism of the MarR family of regulators.
Nucleic Acids Res., 37, 2009
3GFL
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BU of 3gfl by Molmil
Crystal structure of the ST1710 mutant (R90A) protein
分子名称: 146aa long hypothetical transcriptional regulator, CALCIUM ION
著者Kumarevel, T, Tanaka, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-02-27
公開日2009-08-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献ST1710-DNA complex crystal structure reveals the DNA binding mechanism of the MarR family of regulators.
Nucleic Acids Res., 37, 2009
3GF2
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BU of 3gf2 by Molmil
Crystal structure of the hypothetical regulator ST1710 complexed with sodium salicylate
分子名称: 146aa long hypothetical transcriptional regulator, 2-HYDROXYBENZOIC ACID
著者Kumarevel, T, Tanaka, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-02-26
公開日2009-08-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献ST1710-DNA complex crystal structure reveals the DNA binding mechanism of the MarR family of regulators.
Nucleic Acids Res., 37, 2009
3GEZ
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BU of 3gez by Molmil
Crystal Structure of the hypothetical egulator from Sulfolobus tokodaii 7
分子名称: 146aa long hypothetical transcriptional regulator, CALCIUM ION
著者Kumarevel, T, Tanaka, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-02-26
公開日2009-08-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献ST1710-DNA complex crystal structure reveals the DNA binding mechanism of the MarR family of regulators.
Nucleic Acids Res., 37, 2009
3GFM
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BU of 3gfm by Molmil
Crystal structure of the ST1710 mutant (K91A) protein
分子名称: 146aa long hypothetical transcriptional regulator, CALCIUM ION
著者Kumarevel, T, Tanaka, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-02-27
公開日2009-08-25
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献ST1710-DNA complex crystal structure reveals the DNA binding mechanism of the MarR family of regulators.
Nucleic Acids Res., 37, 2009
1WFS
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BU of 1wfs by Molmil
Solution Structure of Glia Maturation Factor-gamma from Mus Musculus
分子名称: Glia maturation factor gamma
著者Goroncy, A.K, Kigawa, T, Koshiba, S, Kobayashi, N, Tochio, N, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-26
公開日2004-11-26
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献NMR solution structures of actin depolymerizing factor homology domains.
Protein Sci., 18, 2009
1WV9
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BU of 1wv9 by Molmil
Crystal Structure of Rhodanese Homolog TT1651 from an Extremely Thermophilic Bacterium Thermus thermophilus HB8
分子名称: Rhodanese Homolog TT1651
著者Mizohata, E, Hattori, M, Tatsuguchi, A, Terada, T, Kuramitsu, S, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-12-12
公開日2005-06-19
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the single-domain rhodanese homologue TTHA0613 from Thermus thermophilus HB8
Proteins, 64, 2006
1WGU
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BU of 1wgu by Molmil
Solution Structure of the C-terminal Phosphotyrosine Interaction Domain of APBB2 from Mouse
分子名称: amyloid beta (A4) precursor protein-binding, family B, member 2
著者Li, H, Hayashi, F, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-28
公開日2004-11-28
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structure of the C-terminal phosphotyrosine interaction domain of Fe65L1 complexed with the cytoplasmic tail of amyloid precursor protein reveals a novel peptide binding mode
J.Biol.Chem., 283, 2008
1J09
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BU of 1j09 by Molmil
Crystal structure of Thermus thermophilus glutamyl-tRNA synthetase complexed with ATP and Glu
分子名称: ADENOSINE-5'-TRIPHOSPHATE, GLUTAMIC ACID, Glutamyl-tRNA synthetase, ...
著者Sekine, S, Nureki, O, Dubois, D.Y, Bernier, S, Chenevert, R, Lapointe, J, Vassylyev, D.G, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-11-12
公開日2003-02-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献ATP binding by glutamyl-tRNA synthetase is switched to the productive mode by tRNA binding
EMBO J., 22, 2003
1X56
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Crystal structure of asparaginyl-tRNA synthetase from Pyrococcus horikoshii
分子名称: Asparaginyl-tRNA synthetase
著者Iwasaki, W, Sekine, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-15
公開日2006-05-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Structural Basis of the Water-assisted Asparagine Recognition by Asparaginyl-tRNA Synthetase.
J.Mol.Biol., 360, 2006
3IXQ
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BU of 3ixq by Molmil
Structure of ribose 5-phosphate isomerase a from methanocaldococcus jannaschii
分子名称: ACETATE ION, CHLORIDE ION, Ribose-5-phosphate isomerase A, ...
著者Antonyuk, S.V, Ellis, M.J, Strange, R.W, Hasnain, S.S, Bessho, Y, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-09-04
公開日2009-10-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献The structure of an archaeal ribose-5-phosphate isomerase from Methanocaldococcus jannaschii (MJ1603).
Acta Crystallogr.,Sect.F, 65, 2009
3IWT
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BU of 3iwt by Molmil
Structure of hypothetical molybdenum cofactor biosynthesis protein B from Sulfolobus tokodaii
分子名称: 178aa long hypothetical molybdenum cofactor biosynthesis protein B, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Antonyuk, S.V, Ellis, M.J, Strange, R.W, Hasnain, S.S, Bessho, Y, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-09-03
公開日2009-09-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure of hypothetical Mo-cofactor biosynthesis protein B (ST2315) from Sulfolobus tokodaii
Acta Crystallogr.,Sect.F, 65, 2009
3KB6
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BU of 3kb6 by Molmil
Crystal structure of D-Lactate dehydrogenase from aquifex aeolicus complexed with NAD and Lactic acid
分子名称: D-lactate dehydrogenase, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Antonyuk, S.V, Strange, R.W, Ellis, M.J, Bessho, Y, Kuramitsu, S, Yokoyama, S, Hasnain, S.S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-10-20
公開日2009-11-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献Structure of D-lactate dehydrogenase from Aquifex aeolicus complexed with NAD(+) and lactic acid (or pyruvate).
Acta Crystallogr.,Sect.F, 65, 2009
3KBB
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BU of 3kbb by Molmil
Crystal structure of putative beta-phosphoglucomutase from Thermotoga maritima
分子名称: GLYCEROL, Phosphorylated carbohydrates phosphatase TM_1254, SULFATE ION
著者Strange, R.W, Antonyuk, S.V, Ellis, M.J, Bessho, Y, Kuramitsu, S, Yokoyama, S, Hasnain, S.S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-10-20
公開日2009-11-17
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Structure of a putative beta-phosphoglucomutase (TM1254) from Thermotoga maritima.
Acta Crystallogr.,Sect.F, 65, 2009
1D8Z
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BU of 1d8z by Molmil
SOLUTION STRUCTURE OF THE FIRST RNA-BINDING DOMAIN (RBD1) OF HU ANTIGEN C (HUC)
分子名称: HU ANTIGEN C
著者Inoue, M, Muto, Y, Sakamoto, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1999-10-26
公開日2000-04-07
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR studies on functional structures of the AU-rich element-binding domains of Hu antigen C.
Nucleic Acids Res., 28, 2000
1D9A
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BU of 1d9a by Molmil
SOLUTION STRUCTURE OF THE SECOND RNA-BINDING DOMAIN (RBD2) OF HU ANTIGEN C (HUC)
分子名称: HU ANTIGEN C
著者Inoue, M, Muto, Y, Sakamoto, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1999-10-26
公開日2000-04-07
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR studies on functional structures of the AU-rich element-binding domains of Hu antigen C.
Nucleic Acids Res., 28, 2000
1B22
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BU of 1b22 by Molmil
RAD51 (N-TERMINAL DOMAIN)
分子名称: DNA REPAIR PROTEIN RAD51
著者Aihara, H, Ito, Y, Kurumizaka, H, Yokoyama, S, Shibata, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1998-12-04
公開日1999-12-03
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献The N-terminal domain of the human Rad51 protein binds DNA: structure and a DNA binding surface as revealed by NMR.
J.Mol.Biol., 290, 1999
1BW6
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BU of 1bw6 by Molmil
HUMAN CENTROMERE PROTEIN B (CENP-B) DNA BINDIGN DOMAIN RP1
分子名称: PROTEIN (CENTROMERE PROTEIN B)
著者Iwahara, J, Kigawa, T, Kitagawa, K, Masumoto, H, Okazaki, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1998-09-30
公開日1998-10-07
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献A helix-turn-helix structure unit in human centromere protein B (CENP-B).
EMBO J., 17, 1998
1EF5
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BU of 1ef5 by Molmil
SOLUTION STRUCTURE OF THE RAS-BINDING DOMAIN OF RGL
分子名称: RGL
著者Kigawa, T, Endo, M, Ito, Y, Shirouzu, M, Kikuchi, A, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2000-02-07
公開日2000-02-23
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of the Ras-binding domain of RGL.
FEBS Lett., 441, 1998
1B7F
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BU of 1b7f by Molmil
SXL-LETHAL PROTEIN/RNA COMPLEX
分子名称: PROTEIN (SXL-LETHAL PROTEIN), RNA (5'-R(P*GP*UP*UP*GP*UP*UP*UP*UP*UP*UP*UP*U)-3')
著者Handa, N, Nureki, O, Kurimoto, K, Kim, I, Sakamoto, H, Shimura, Y, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1999-01-23
公開日1999-05-03
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for recognition of the tra mRNA precursor by the Sex-lethal protein.
Nature, 398, 1999
1AA3
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C-TERMINAL DOMAIN OF THE E. COLI RECA, NMR, MINIMIZED AVERAGE STRUCTURE
分子名称: RECA
著者Aihara, H, Ito, Y, Kurumizaka, H, Terada, T, Yokoyama, S, Shibata, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1997-01-22
公開日1997-07-23
最終更新日2024-04-10
実験手法SOLUTION NMR
主引用文献An interaction between a specified surface of the C-terminal domain of RecA protein and double-stranded DNA for homologous pairing.
J.Mol.Biol., 274, 1997
1EW1
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RECA PROTEIN-BOUND SINGLE-STRANDED DNA
分子名称: DNA (5'-D(*TP*AP*CP*G)-3')
著者Nishinaka, T, Ito, Y, Yokoyama, S, Shibata, T.
登録日2000-04-21
公開日2000-05-08
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献An extended DNA structure through deoxyribose-base stacking induced by RecA protein.
Proc.Natl.Acad.Sci.USA, 94, 1997
2IDE
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BU of 2ide by Molmil
Crystal Structure of the molybdenum cofactor biosynthesis protein C (TTHA1789) from Thermus Theromophilus HB8
分子名称: Molybdenum cofactor biosynthesis protein C, PHOSPHATE ION
著者Jeyakanthan, J, Kanaujia, S.P, Vasuki Ranjani, C, Sekar, K, Baba, S, Ebihara, A, Kuramitsu, S, Shinkai, A, Shiro, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-09-15
公開日2007-09-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of the molybdenum cofactor biosynthesis protein C (TTHA1789) from Thermus Theromophilus HB8
To be Published

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