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5YKV
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The crystal structure of Macrobrachium rosenbergii nodavirus P-domain
分子名称: Capsid protein
著者Chen, N.C, Yoshimura, M, Lin, C.C, Guan, H.H, Chuankhayan, P, Chen, C.J.
登録日2017-10-16
公開日2018-10-24
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献The atomic structures of shrimp nodaviruses reveal new dimeric spike structures and particle polymorphism.
Commun Biol, 2, 2019
5YKU
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BU of 5yku by Molmil
The crystal structure of Macrobrachium rosenbergii nodavirus P-domain with Zn ions
分子名称: Capsid protein, ZINC ION
著者Chen, N.C, Yoshimura, M, Lin, C.C, Guan, H.H, Chuankhayan, P, Chen, C.J.
登録日2017-10-16
公開日2018-10-24
最終更新日2019-03-13
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献The atomic structures of shrimp nodaviruses reveal new dimeric spike structures and particle polymorphism.
Commun Biol, 2, 2019
5YL1
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BU of 5yl1 by Molmil
T=1 subviral particle of Penaeus vannamei nodavirus capsid protein deletion mutant (delta 1-37 & 251-368)
分子名称: CALCIUM ION, Capsid protein
著者Chen, N.C, Yoshimura, M, Lin, C.C, Guan, H.H, Chuankhayan, P, Chen, C.J.
登録日2017-10-16
公開日2018-12-12
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (3.12 Å)
主引用文献The atomic structures of shrimp nodaviruses reveal new dimeric spike structures and particle polymorphism.
Commun Biol, 2, 2019
1YAG
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BU of 1yag by Molmil
STRUCTURE OF THE YEAST ACTIN-HUMAN GELSOLIN SEGMENT 1 COMPLEX
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, MAGNESIUM ION, ...
著者Vorobiev, S, Strokopytov, B, Frieden, C, Almo, S.C.
登録日1998-10-09
公開日1999-10-09
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The structure of nonvertebrate actin: Implications for the ATP hydrolytic mechanism
Proc.Natl.Acad.Sci.USA, 100, 2003
6AB5
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BU of 6ab5 by Molmil
Cryo-EM structure of T=1 Penaeus vannamei nodavirus
分子名称: Capsid protein
著者Chen, N.C, Miyazaki, N, Yoshimura, M, Guan, H.H, Lin, C.C, Iwasaki, K, Chen, C.J.
登録日2018-07-20
公開日2019-03-20
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献The atomic structures of shrimp nodaviruses reveal new dimeric spike structures and particle polymorphism.
Commun Biol, 2, 2019
6AB6
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BU of 6ab6 by Molmil
Cryo-EM structure of T=3 Penaeus vannamei nodavirus
分子名称: CALCIUM ION, Capsid protein
著者Chen, N.C, Miyazaki, N, Yoshimura, M, Guan, H.H, Lin, C.C, Iwasaki, K, Chen, C.J.
登録日2018-07-20
公開日2019-03-20
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献The atomic structures of shrimp nodaviruses reveal new dimeric spike structures and particle polymorphism.
Commun Biol, 2, 2019
7XGZ
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BU of 7xgz by Molmil
Cryo-EM structure of the T=4 lake sinai virus 2 virus-like capsid at pH 7.5
分子名称: Capsid protein alpha
著者Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C.
登録日2022-04-07
公開日2023-02-08
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.24 Å)
主引用文献Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions
Nat Commun, 14, 2023
7XPA
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BU of 7xpa by Molmil
Cryo-EM structure of the T=3 lake sinai virus 2 virus-like capsid at pH 7.5
分子名称: Capsid protein alpha
著者Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C.
登録日2022-05-04
公開日2023-02-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.33 Å)
主引用文献Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions.
Nat Commun, 14, 2023
7XPE
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BU of 7xpe by Molmil
Cryo-EM structure of the T=4 lake sinai virus 2 virus-like capsid at pH 8.5
分子名称: Capsid protein alpha
著者Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C.
登録日2022-05-04
公開日2023-02-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.32 Å)
主引用文献Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions.
Nat Commun, 14, 2023
7XPD
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BU of 7xpd by Molmil
Cryo-EM structure of the T=3 lake sinai virus 2 virus-like capsid at pH 6.5
分子名称: Capsid protein alpha
著者Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C.
登録日2022-05-04
公開日2023-02-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.74 Å)
主引用文献Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions.
Nat Commun, 14, 2023
7XPF
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BU of 7xpf by Molmil
Cryo-EM structure of the T=3 lake sinai virus 2 virus-like capsid at pH 8.5
分子名称: Capsid protein alpha
著者Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C.
登録日2022-05-04
公開日2023-02-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.13 Å)
主引用文献Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions.
Nat Commun, 14, 2023
7XPB
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BU of 7xpb by Molmil
Cryo-EM structure of the T=4 lake sinai virus 2 virus-like capsid at pH 6.5
分子名称: Capsid protein alpha
著者Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C.
登録日2022-05-04
公開日2023-02-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.91 Å)
主引用文献Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions.
Nat Commun, 14, 2023
7XPG
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BU of 7xpg by Molmil
Cryo-EM structure of the T=3 lake sinai virus 1 (delta-N48) virus-like capsid at pH 6.5
分子名称: Capsid protein alpha, RNA (5'-R(P*UP*G)-3')
著者Chen, N.C, Wang, C.H, Chen, C.J, Yoshimura, M, Guan, H.H, Chuankhayan, P, Lin, C.C.
登録日2022-05-04
公開日2023-02-08
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.51 Å)
主引用文献Structures of honeybee-infecting Lake Sinai virus reveal domain functions and capsid assembly with dynamic motions.
Nat Commun, 14, 2023
7B21
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BU of 7b21 by Molmil
The X183 domain from Cellvibrio japonicus Cbp2D
分子名称: 1,2-ETHANEDIOL, Carbohydrate binding protein, putative, ...
著者Branch, J, Hemsworth, G.R.
登録日2020-11-25
公開日2021-07-21
最終更新日2021-09-29
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献C-type cytochrome-initiated reduction of bacterial lytic polysaccharide monooxygenases.
Biochem.J., 478, 2021
8W4M
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BU of 8w4m by Molmil
Crystal structure of open conformation of human immunoglobulin Fc in presence of EndoSz
分子名称: Immunoglobulin gamma-1 heavy chain, ZINC ION, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
著者Guan, H.H, Lin, C.C, Hsieh, Y.C, Chen, C.J.
登録日2023-08-24
公開日2024-07-03
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Structure-Based High-Efficiency Homogeneous Antibody Platform by Endoglycosidase Sz Provides Insights into Its Transglycosylation Mechanism.
Jacs Au, 4, 2024
8W4L
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BU of 8w4l by Molmil
Crystal structure of closed conformation of human immunoglobulin Fc in presence of EndoSz
分子名称: CHLORIDE ION, Immunoglobulin gamma-1 heavy chain, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Guan, H.H, Lin, C.C, Hsieh, Y.C, Chen, C.J.
登録日2023-08-24
公開日2024-07-03
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure-Based High-Efficiency Homogeneous Antibody Platform by Endoglycosidase Sz Provides Insights into Its Transglycosylation Mechanism.
Jacs Au, 4, 2024
8W4N
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BU of 8w4n by Molmil
Crystal structure of EndoSz mutant D234M, in space group P21, in complex with oligosaccharide G2S1
分子名称: CALCIUM ION, Glycoside hydrolase, N-acetyl-alpha-neuraminic acid-(2-6)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Guan, H.H, Lin, C.C, Hsieh, Y.C, Chen, C.J.
登録日2023-08-24
公開日2024-07-03
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure-Based High-Efficiency Homogeneous Antibody Platform by Endoglycosidase Sz Provides Insights into Its Transglycosylation Mechanism.
Jacs Au, 4, 2024
8W4G
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BU of 8w4g by Molmil
Crystal structure of EndoSz mutant D234M, from Streptococcus equi subsp. Zooepidemicus Sz105
分子名称: CALCIUM ION, glycoside hydrolase
著者Guan, H.H, Lin, C.C, Hsieh, Y.C, Chen, C.J.
登録日2023-08-24
公開日2024-07-03
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structure-Based High-Efficiency Homogeneous Antibody Platform by Endoglycosidase Sz Provides Insights into Its Transglycosylation Mechanism.
Jacs Au, 4, 2024
8W4I
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BU of 8w4i by Molmil
Crystal structure of EndoSz mutant D234M in space group P21
分子名称: CALCIUM ION, glycoside hydrolase
著者Guan, H.H, Lin, C.C, Hsieh, Y.C, Chen, C.J.
登録日2023-08-24
公開日2024-07-03
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure-Based High-Efficiency Homogeneous Antibody Platform by Endoglycosidase Sz Provides Insights into Its Transglycosylation Mechanism.
Jacs Au, 4, 2024
6Z5Y
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BU of 6z5y by Molmil
Structure of a novel LPMO from Phytophthora infestans
分子名称: COPPER (II) ION, Lytic Polysaccharide Monooxygenase, TRIETHYLENE GLYCOL
著者Urresti, S, Davies, G.J.
登録日2020-05-27
公開日2021-08-11
最終更新日2021-09-29
実験手法X-RAY DIFFRACTION (1.01 Å)
主引用文献Secreted pectin monooxygenases drive plant infection by pathogenic oomycetes.
Science, 373, 2021
6I0Y
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BU of 6i0y by Molmil
TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnel
分子名称: 23S ribosomal RNA, 50S ribosomal protein L10, 50S ribosomal protein L11, ...
著者Su, T, Kudva, R, von Heijne, G, Beckmann, R.
登録日2018-10-26
公開日2018-12-05
最終更新日2019-01-23
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Folding pathway of an Ig domain is conserved on and off the ribosome.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6GPB
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BU of 6gpb by Molmil
REFINED CRYSTAL STRUCTURE OF THE PHOSPHORYLASE-HEPTULOSE 2-PHOSPHATE-OLIGOSACCHARIDE-AMP COMPLEX
分子名称: 1-deoxy-2-O-phosphono-alpha-D-gluco-hept-2-ulopyranose, ADENOSINE MONOPHOSPHATE, GLYCOGEN PHOSPHORYLASE B, ...
著者Acharya, K.R, Johnson, L.N.
登録日1990-06-04
公開日1992-10-15
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献Refined crystal structure of the phosphorylase-heptulose 2-phosphate-oligosaccharide-AMP complex.
J.Mol.Biol., 211, 1990
6JO0
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BU of 6jo0 by Molmil
Crystal structure of the DTS-motif rhodopsin from Phaeocystis globosa virus 12T
分子名称: (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, DECANE, DODECANE, ...
著者Hosaka, T, Kimura-Someya, T, Shirouzu, M.
登録日2019-03-19
公開日2019-10-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.651 Å)
主引用文献A distinct lineage of giant viruses brings a rhodopsin photosystem to unicellular marine predators.
Proc.Natl.Acad.Sci.USA, 116, 2019
8GPB
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BU of 8gpb by Molmil
STRUCTURAL MECHANISM FOR GLYCOGEN PHOSPHORYLASE CONTROL BY PHOSPHORYLATION AND AMP
分子名称: ADENOSINE MONOPHOSPHATE, GLYCOGEN PHOSPHORYLASE B, PYRIDOXAL-5'-PHOSPHATE
著者Barford, D, Hu, S.-H, Johnson, L.N.
登録日1990-11-13
公開日1992-10-15
最終更新日2017-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural mechanism for glycogen phosphorylase control by phosphorylation and AMP.
J.Mol.Biol., 218, 1991
8B5Q
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BU of 8b5q by Molmil
Crystal Structure of P. aeruginosa WaaG in complex with UMP
分子名称: UDP-glucose:(Heptosyl) LPS alpha 1,3-glucosyltransferase WaaG, URIDINE-5'-MONOPHOSPHATE
著者Scaletti, E, Gustafsson Westergren, R, Stenmark, P.
登録日2022-09-24
公開日2023-10-04
最終更新日2024-04-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and functional insights into the Pseudomonas aeruginosa glycosyltransferase WaaG and the implications for lipopolysaccharide biosynthesis.
J.Biol.Chem., 299, 2023

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