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4QZG
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BU of 4qzg by Molmil
Mouse Tdt, F401A mutant, in complex with a DSB substrate, C-C base pair
分子名称: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, 5'-D(*AP*AP*AP*AP*AP*C)-3', 5'-D(*TP*TP*TP*TP*TP*GP*C)-3', ...
著者Gouge, J, Delarue, M.
登録日2014-07-27
公開日2015-06-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural basis for a novel mechanism of DNA bridging and alignment in eukaryotic DSB DNA repair.
Embo J., 34, 2015
4QZA
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BU of 4qza by Molmil
Mouse Tdt in complex with a DSB substrate, C-C base pair
分子名称: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, 5'-D(*AP*AP*AP*AP*AP*C)-3', 5'-D(*TP*TP*TP*TP*TP*GP*C)-3', ...
著者Gouge, J, Delarue, M.
登録日2014-07-27
公開日2015-06-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Structural basis for a novel mechanism of DNA bridging and alignment in eukaryotic DSB DNA repair.
Embo J., 34, 2015
4QZD
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BU of 4qzd by Molmil
Mouse Tdt, F405A mutant, in complex with a DSB substrate, C-C base pair
分子名称: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, 5'-D(*AP*AP*AP*AP*AP*C)-3', 5'-D(*TP*TP*TP*TP*TP*GP*C)-3', ...
著者Gouge, J, Delarue, M.
登録日2014-07-27
公開日2015-06-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis for a novel mechanism of DNA bridging and alignment in eukaryotic DSB DNA repair.
Embo J., 34, 2015
4QZH
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BU of 4qzh by Molmil
Mouse Tdt, F401A mutant, in complex with a DSB substrate, C-T base pair
分子名称: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, 5'-D(*AP*AP*AP*AP*AP*C)-3', 5'-D(*TP*TP*TP*TP*TP*GP*T)-3', ...
著者Gouge, J, Delarue, M.
登録日2014-07-27
公開日2015-06-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for a novel mechanism of DNA bridging and alignment in eukaryotic DSB DNA repair.
Embo J., 34, 2015
6HMF
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BU of 6hmf by Molmil
D-family DNA polymerase - DP1 subunit (3'-5' proof-reading exonuclease) H451 proof-reading deficient variant
分子名称: ACETATE ION, CACODYLATE ION, CALCIUM ION, ...
著者Raia, P, Delarue, M, Sauguet, L.
登録日2018-09-12
公開日2019-01-30
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of the DP1-DP2 PolD complex bound with DNA and its implications for the evolutionary history of DNA and RNA polymerases.
PLoS Biol., 17, 2019
6GO3
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BU of 6go3 by Molmil
TdT chimera (Loop1 of pol mu) - apoenzyme
分子名称: DNA nucleotidylexotransferase,DNA-directed DNA/RNA polymerase mu,DNA nucleotidylexotransferase
著者Loc'h, J, Gerodimos, C.A, Rosario, S, Lieber, M.R, Delarue, M.
登録日2018-06-01
公開日2019-06-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural evidence for an intransbase selection mechanism involving Loop1 in polymerase mu at an NHEJ double-strand break junction.
J.Biol.Chem., 294, 2019
6GO4
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BU of 6go4 by Molmil
TdT chimera (Loop1 of pol mu) - binary complex with ddCTP
分子名称: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, DNA nucleotidylexotransferase,DNA-directed DNA/RNA polymerase mu,DNA nucleotidylexotransferase, MAGNESIUM ION, ...
著者Loc'h, J, Gerodimos, C.A, Rosario, S, Lieber, M.R, Delarue, M.
登録日2018-06-01
公開日2019-06-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structural evidence for an intransbase selection mechanism involving Loop1 in polymerase mu at an NHEJ double-strand break junction.
J.Biol.Chem., 294, 2019
6GO7
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BU of 6go7 by Molmil
TdT chimera (Loop1 of pol mu) - full DNA synapsis complex
分子名称: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, DNA (5'-D(*AP*AP*AP*AP*AP*C)-3'), DNA (5'-D(*TP*TP*TP*TP*TP*GP*C)-3'), ...
著者Loc'h, J, Gerodimos, C.A, Rosario, S, Lieber, M.R, Delarue, M.
登録日2018-06-01
公開日2019-06-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural evidence for an intransbase selection mechanism involving Loop1 in polymerase mu at an NHEJ double-strand break junction.
J.Biol.Chem., 294, 2019
6GO5
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BU of 6go5 by Molmil
TdT chimera (Loop1 of pol mu) - Ternary complex with 1-nt gapped DNA substrate
分子名称: 2'-deoxy-5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}phosphoryl]cytidine, DNA (5'-D(*AP*CP*AP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*TP*GP*GP*CP*AP*AP*AP*CP*A)-3'), ...
著者Loc'h, J, Gerodimos, C.A, Rosario, S, Lieber, M.R, Delarue, M.
登録日2018-06-01
公開日2019-06-05
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structural evidence for an intransbase selection mechanism involving Loop1 in polymerase mu at an NHEJ double-strand break junction.
J.Biol.Chem., 294, 2019
6GO6
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BU of 6go6 by Molmil
TdT chimera (Loop1 of pol mu) - ternary complex with downstream dsDNA
分子名称: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, DNA (5'-D(*AP*AP*AP*AP*AP*C)-3'), DNA (5'-D(*TP*TP*TP*TP*TP*GP*GP*C)-3'), ...
著者Loc'h, J, Gerodimos, C.A, Rosario, S, Lieber, M.R, Delarue, M.
登録日2018-06-01
公開日2019-06-05
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Structural evidence for an intransbase selection mechanism involving Loop1 in polymerase mu at an NHEJ double-strand break junction.
J.Biol.Chem., 294, 2019
4ILC
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BU of 4ilc by Molmil
The GLIC pentameric ligand-gated ion channel in complex with sulfates
分子名称: ACETATE ION, CHLORIDE ION, DIUNDECYL PHOSPHATIDYL CHOLINE, ...
著者Sauguet, L, Malherbe, L, Corringer, P.J, Delarue, M.
登録日2012-12-29
公開日2013-02-20
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Structural basis for ion permeation mechanism in pentameric ligand-gated ion channels.
Embo J., 32, 2013
4IL4
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BU of 4il4 by Molmil
The pentameric ligand-gated ion channel GLIC in complex with Se-DDM
分子名称: ACETATE ION, CHLORIDE ION, Proton-gated ion channel, ...
著者Sauguet, L, Malherbe, L, Corringer, P.J, Delarue, M.
登録日2012-12-29
公開日2013-02-20
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural basis for ion permeation mechanism in pentameric ligand-gated ion channels.
Embo J., 32, 2013
4IL9
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BU of 4il9 by Molmil
The pentameric ligand-gated ion channel GLIC A237F in complex with bromide
分子名称: ACETATE ION, BROMIDE ION, DIUNDECYL PHOSPHATIDYL CHOLINE, ...
著者Sauguet, L, Corringer, P.J, Delarue, M.
登録日2012-12-29
公開日2013-02-20
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献Structural basis for ion permeation mechanism in pentameric ligand-gated ion channels.
Embo J., 32, 2013
4ILA
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BU of 4ila by Molmil
The pentameric ligand-gated ion channel GLIC A237F in complex with Cesium
分子名称: ACETATE ION, CESIUM ION, CHLORIDE ION, ...
著者Sauguet, L, Corringer, P.J, Delarue, M.
登録日2012-12-29
公開日2013-02-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structural basis for ion permeation mechanism in pentameric ligand-gated ion channels.
Embo J., 32, 2013
4ILB
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BU of 4ilb by Molmil
The pentameric ligand-gated ion channel GLIC A237F in complex with Rubidium
分子名称: ACETATE ION, CHLORIDE ION, DIUNDECYL PHOSPHATIDYL CHOLINE, ...
著者Sauguet, L, Corringer, P.J, Delarue, M.
登録日2012-12-29
公開日2013-02-20
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Structural basis for ion permeation mechanism in pentameric ligand-gated ion channels.
Embo J., 32, 2013
4HFI
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BU of 4hfi by Molmil
The GLIC pentameric Ligand-Gated Ion Channel at 2.4 A resolution
分子名称: ACETATE ION, CHLORIDE ION, DIUNDECYL PHOSPHATIDYL CHOLINE, ...
著者Sauguet, L, Corringer, P.J, Delarue, M.
登録日2012-10-05
公開日2013-02-20
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for ion permeation mechanism in pentameric ligand-gated ion channels.
Embo J., 32, 2013
6HYW
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BU of 6hyw by Molmil
THE GLIC PENTAMERIC LIGAND-GATED ION CHANNEL MUTANT Y119F
分子名称: ACETATE ION, CHLORIDE ION, DIUNDECYL PHOSPHATIDYL CHOLINE, ...
著者Hu, H.D, Delarue, M.
登録日2018-10-22
公開日2018-12-19
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Electrostatics, proton sensor, and networks governing the gating transition in GLIC, a proton-gated pentameric ion channel.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6HZ1
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BU of 6hz1 by Molmil
THE GLIC PENTAMERIC LIGAND-GATED ION CHANNEL MUTANT E243C
分子名称: ACETATE ION, CHLORIDE ION, DIUNDECYL PHOSPHATIDYL CHOLINE, ...
著者Hu, H.D, Delarue, M.
登録日2018-10-22
公開日2018-12-19
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Electrostatics, proton sensor, and networks governing the gating transition in GLIC, a proton-gated pentameric ion channel.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6HJ3
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BU of 6hj3 by Molmil
Xray structure of GLIC in complex with fumarate
分子名称: CHLORIDE ION, DIUNDECYL PHOSPHATIDYL CHOLINE, DODECYL-BETA-D-MALTOSIDE, ...
著者Fourati, Z, Delarue, M.
登録日2018-08-31
公開日2019-09-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural evidence for the binding of monocarboxylates and dicarboxylates at pharmacologically relevant extracellular sites of a pentameric ligand-gated ion channel.
Acta Crystallogr D Struct Biol, 76, 2020
6HJA
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BU of 6hja by Molmil
Xray structure of GLIC in complex with glutarate
分子名称: CHLORIDE ION, DIUNDECYL PHOSPHATIDYL CHOLINE, DODECANE, ...
著者Fourati, Z, Delarue, M.
登録日2018-09-03
公開日2019-09-18
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural evidence for the binding of monocarboxylates and dicarboxylates at pharmacologically relevant extracellular sites of a pentameric ligand-gated ion channel.
Acta Crystallogr D Struct Biol, 76, 2020
6HZ3
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BU of 6hz3 by Molmil
THE GLIC PENTAMERIC LIGAND-GATED ION CHANNEL MUTANT E243G
分子名称: CHLORIDE ION, Proton-gated ion channel
著者Hu, H.D, Delarue, M.
登録日2018-10-22
公開日2018-12-19
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Electrostatics, proton sensor, and networks governing the gating transition in GLIC, a proton-gated pentameric ion channel.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6HJI
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BU of 6hji by Molmil
Xray structure of GLIC in complex with crotonate
分子名称: BUTENOIC ACID, CHLORIDE ION, DIUNDECYL PHOSPHATIDYL CHOLINE, ...
著者Fourati, Z, Delarue, M.
登録日2018-09-03
公開日2019-09-18
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural evidence for the binding of monocarboxylates and dicarboxylates at pharmacologically relevant extracellular sites of a pentameric ligand-gated ion channel.
Acta Crystallogr D Struct Biol, 76, 2020
6HYX
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BU of 6hyx by Molmil
THE GLIC PENTAMERIC LIGAND-GATED ION CHANNEL MUTANT Y197F-P250C
分子名称: CHLORIDE ION, DODECYL-BETA-D-MALTOSIDE, Proton-gated ion channel, ...
著者Hu, H.D, Delarue, M.
登録日2018-10-22
公開日2018-12-19
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Electrostatics, proton sensor, and networks governing the gating transition in GLIC, a proton-gated pentameric ion channel.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6HYA
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BU of 6hya by Molmil
THE GLIC PENTAMERIC LIGAND-GATED ION CHANNEL MUTANT Q193L
分子名称: CHLORIDE ION, DODECYL-BETA-D-MALTOSIDE, Proton-gated ion channel
著者Hu, H.D, Delarue, M.
登録日2018-10-19
公開日2018-12-19
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (3.39 Å)
主引用文献Electrostatics, proton sensor, and networks governing the gating transition in GLIC, a proton-gated pentameric ion channel.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6HYZ
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BU of 6hyz by Molmil
THE GLIC PENTAMERIC LIGAND-GATED ION CHANNEL MUTANT K248C
分子名称: ACETATE ION, CHLORIDE ION, DIUNDECYL PHOSPHATIDYL CHOLINE, ...
著者Hu, H.D, Delarue, M.
登録日2018-10-22
公開日2018-12-19
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Electrostatics, proton sensor, and networks governing the gating transition in GLIC, a proton-gated pentameric ion channel.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018

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