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4U9N
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BU of 4u9n by Molmil
Structure of a membrane protein
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, MANGANESE (II) ION, Magnesium transporter MgtE, ...
著者Takeda, H, Hattori, M, Nishizawa, T, Yamashita, K, Shah, S.T.A, Caffrey, M, Maturana, A.D, Ishitani, R, Nureki, O.
登録日2014-08-06
公開日2014-12-03
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis for ion selectivity revealed by high-resolution crystal structure of Mg(2+) channel MgtE
Nat Commun, 5, 2014
4U4T
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BU of 4u4t by Molmil
Structure of a nitrate/nitrite antiporter NarK in nitrate-bound inward-open state
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, NITRATE ION, Nitrate/nitrite transporter NarK, ...
著者Fukuda, M, Takeda, H, Kato, H.E, Doki, S, Ito, K, Maturana, A.D, Ishitani, R, Nureki, O.
登録日2014-07-24
公開日2015-07-15
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for dynamic mechanism of nitrate/nitrite antiport by NarK
Nat Commun, 6, 2015
4UP8
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BU of 4up8 by Molmil
Crystal structure of Entamoeba histolytica lysyl-tRNA synthetase apo form
分子名称: LYSINE--TRNA LIGASE
著者Bonnefond, L, Nureki, O.
登録日2014-06-14
公開日2014-10-29
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.896 Å)
主引用文献Crystal Structures of Entamoeba Histolytica Lysyl-tRNA Synthetase Reveal Conformational Changes Upon Lysine Binding and a Specific Helix Bundle Domain.
FEBS Lett., 588, 2014
4UPA
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BU of 4upa by Molmil
Crystal structure of Entamoeba histolytica lysyl-tRNA synthetase in complex with AMPPNP
分子名称: LYSINE--TRNA LIGASE, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Bonnefond, L, Nureki, O.
登録日2014-06-14
公開日2014-10-29
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.901 Å)
主引用文献Crystal Structures of Entamoeba Histolytica Lysyl-tRNA Synthetase Reveal Conformational Changes Upon Lysine Binding and a Specific Helix Bundle Domain.
FEBS Lett., 588, 2014
4UP9
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BU of 4up9 by Molmil
Crystal structure of Entamoeba histolytica lysyl-tRNA synthetase in complex with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, LYSINE--TRNA LIGASE
著者Bonnefond, L, Nureki, O.
登録日2014-06-14
公開日2014-10-29
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.047 Å)
主引用文献Crystal Structures of Entamoeba Histolytica Lysyl-tRNA Synthetase Reveal Conformational Changes Upon Lysine Binding and a Specific Helix Bundle Domain.
FEBS Lett., 588, 2014
4UP7
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BU of 4up7 by Molmil
Crystal structure of Entamoeba histolytica lysyl-tRNA synthetase in complex with lysyl-adenylate
分子名称: ADENOSINE-5'-[LYSYL-PHOSPHATE], LYSINE--TRNA LIGASE
著者Bonnefond, L, Nureki, O.
登録日2014-06-14
公開日2014-10-29
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.789 Å)
主引用文献Crystal Structures of Entamoeba Histolytica Lysyl-tRNA Synthetase Reveal Conformational Changes Upon Lysine Binding and a Specific Helix Bundle Domain.
FEBS Lett., 588, 2014
5XUZ
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BU of 5xuz by Molmil
Crystal structure of Lachnospiraceae bacterium ND2006 Cpf1 in complex with crRNA and target DNA (CCCA PAM)
分子名称: 1,2-ETHANEDIOL, DNA (29-MER), DNA (5'-D(*CP*GP*TP*CP*CP*CP*CP*CP*A)-3'), ...
著者Yamano, T, Nishimasu, H, Ishitani, R, Nureki, O.
登録日2017-06-26
公開日2017-08-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Basis for the Canonical and Non-canonical PAM Recognition by CRISPR-Cpf1.
Mol. Cell, 67, 2017
5XUT
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BU of 5xut by Molmil
Crystal structure of Lachnospiraceae bacterium ND2006 Cpf1 in complex with crRNA and target DNA (TCTA PAM)
分子名称: 1,2-ETHANEDIOL, DNA (29-MER), DNA (5'-D(*CP*GP*TP*CP*CP*TP*CP*TP*A)-3'), ...
著者Yamano, T, Nishimasu, H, Ishitani, R, Nureki, O.
登録日2017-06-26
公開日2017-08-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Basis for the Canonical and Non-canonical PAM Recognition by CRISPR-Cpf1.
Mol. Cell, 67, 2017
5XUS
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BU of 5xus by Molmil
Crystal structure of Lachnospiraceae bacterium ND2006 Cpf1 in complex with crRNA and target DNA (TTTA PAM)
分子名称: 1,2-ETHANEDIOL, DNA (29-MER), DNA (5'-D(*CP*GP*TP*CP*CP*TP*TP*TP*A)-3'), ...
著者Yamano, T, Nishimasu, H, Ishitani, R, Nureki, O.
登録日2017-06-26
公開日2017-08-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Basis for the Canonical and Non-canonical PAM Recognition by CRISPR-Cpf1.
Mol. Cell, 67, 2017
5XH6
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BU of 5xh6 by Molmil
Crystal structure of the Acidaminococcus sp. BV3L6 Cpf1 RVR variant in complex with crRNA and target DNA (TATA PAM)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, CRISPR-associated endonuclease Cpf1, ...
著者Nishimasu, H, Yamano, T, Ishitani, R, Nureki, O.
登録日2017-04-19
公開日2017-06-14
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Basis for the Altered PAM Recognition by Engineered CRISPR-Cpf1
Mol. Cell, 67, 2017
5XUU
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BU of 5xuu by Molmil
Crystal structure of Lachnospiraceae bacterium ND2006 Cpf1 in complex with crRNA and target DNA (TCCA PAM)
分子名称: 1,2-ETHANEDIOL, DNA (29-MER), DNA (5'-D(*CP*GP*TP*CP*CP*TP*CP*CP*A)-3'), ...
著者Yamano, T, Nishimasu, H, Ishitani, R, Nureki, O.
登録日2017-06-26
公開日2017-08-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Basis for the Canonical and Non-canonical PAM Recognition by CRISPR-Cpf1.
Mol. Cell, 67, 2017
5Y50
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BU of 5y50 by Molmil
Crystal structure of eukaryotic MATE transporter AtDTX14
分子名称: Protein DETOXIFICATION 14
著者Miyauchi, H, Kusakizako, T, Nishizawa, T, Ishitani, R, Nureki, O.
登録日2017-08-06
公開日2017-12-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for xenobiotic extrusion by eukaryotic MATE transporter
Nat Commun, 8, 2017
5Y78
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BU of 5y78 by Molmil
Crystal structure of the triose-phosphate/phosphate translocator in complex with inorganic phosphate
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, PHOSPHATE ION, Putative hexose phosphate translocator
著者Lee, Y, Nishizawa, T, Takemoto, M, Kumazaki, K, Yamashita, K, Hirata, K, Minoda, A, Nagatoishi, S, Tsumoto, K, Ishitani, R, Nureki, O.
登録日2017-08-16
公開日2017-10-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of the triose-phosphate/phosphate translocator reveals the basis of substrate specificity
Nat Plants, 3, 2017
5Y79
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BU of 5y79 by Molmil
Crystal structure of the triose-phosphate/phosphate translocator in complex with 3-phosphoglycerate
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 3-PHOSPHOGLYCERIC ACID, CITRATE ANION, ...
著者Lee, Y, Nishizawa, T, Takemoto, M, Kumazaki, K, Yamashita, K, Hirata, K, Minoda, A, Nagatoishi, S, Tsumoto, K, Ishitani, R, Nureki, O.
登録日2017-08-16
公開日2017-10-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of the triose-phosphate/phosphate translocator reveals the basis of substrate specificity
Nat Plants, 3, 2017
5ZIH
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BU of 5zih by Molmil
Crystal structure of the red light-activated channelrhodopsin Chrimson.
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Sensory opsin A,Chrimson
著者Oda, K, Vierock, J, Oishi, S, Taniguchi, R, Yamashita, K, Nishizawa, T, Hegemann, P, Nureki, O.
登録日2018-03-15
公開日2018-11-21
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of the red light-activated channelrhodopsin Chrimson.
Nat Commun, 9, 2018
5ZSU
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BU of 5zsu by Molmil
Structure of the human homo-hexameric LRRC8A channel at 4.25 Angstroms
分子名称: Volume-regulated anion channel subunit LRRC8A
著者Kasuya, G, Nakane, T, Yokoyama, T, Shirouzu, M, Ishitani, R, Nureki, O.
登録日2018-04-29
公開日2018-08-15
最終更新日2018-09-26
実験手法ELECTRON MICROSCOPY (4.25 Å)
主引用文献Cryo-EM structures of the human volume-regulated anion channel LRRC8.
Nat. Struct. Mol. Biol., 25, 2018
6AEK
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BU of 6aek by Molmil
Crystal structure of ENPP1 in complex with pApG
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE MONOPHOSPHATE, ...
著者Kato, K, Nishimasu, H, Hirano, S, Hirano, H, Ishitani, R, Nureki, O.
登録日2018-08-05
公開日2019-03-06
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural insights into cGAMP degradation by Ecto-nucleotide pyrophosphatase phosphodiesterase 1.
Nat Commun, 9, 2018
6LMX
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BU of 6lmx by Molmil
Cryo-EM structure of the CALHM chimeric construct (9-mer)
分子名称: Calcium homeostasis modulator 1,Calcium homeostasis modulator protein 2
著者Demura, K, Kusakizako, T, Shihoya, W, Hiraizumi, M, Shimada, H, Yamashita, K, Nishizawa, T, Nureki, O.
登録日2019-12-26
公開日2020-07-29
最終更新日2020-09-09
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM structures of calcium homeostasis modulator channels in diverse oligomeric assemblies.
Sci Adv, 6, 2020
6M04
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BU of 6m04 by Molmil
Structure of the human homo-hexameric LRRC8D channel at 4.36 Angstroms
分子名称: Volume-regulated anion channel subunit LRRC8D
著者Nakamura, R, Kasuya, G, Yokoyama, T, Shirouzu, M, Ishitani, R, Nureki, O.
登録日2020-02-20
公開日2020-06-17
実験手法ELECTRON MICROSCOPY (4.36 Å)
主引用文献Cryo-EM structure of the volume-regulated anion channel LRRC8D isoform identifies features important for substrate permeation.
Commun Biol, 3, 2020
6LMV
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BU of 6lmv by Molmil
Cryo-EM structure of the C. elegans CLHM-1
分子名称: Calcium homeostasis modulator protein
著者Demura, K, Kusakizako, T, Shihoya, W, Hiraizumi, M, Shimada, H, Yamashita, K, Nishizawa, T, Nureki, O.
登録日2019-12-26
公開日2020-07-29
最終更新日2020-09-09
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Cryo-EM structures of calcium homeostasis modulator channels in diverse oligomeric assemblies.
Sci Adv, 6, 2020
6LRY
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BU of 6lry by Molmil
Crystal structure of human endothelin ETB receptor in complex with sarafotoxin S6b
分子名称: Endothelin receptor type B,Endolysin,Endothelin receptor type B, Sarafotoxin-B
著者Izume, T, Miyauchi, H, Shihoya, W, Nureki, O.
登録日2020-01-16
公開日2020-02-12
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of human endothelin ETBreceptor in complex with sarafotoxin S6b.
Biochem.Biophys.Res.Commun., 528, 2020
6LMW
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BU of 6lmw by Molmil
Cryo-EM structure of the CALHM chimeric construct (8-mer)
分子名称: Calcium homeostasis modulator 1,Calcium homeostasis modulator protein 2
著者Demura, K, Kusakizako, T, Shihoya, W, Hiraizumi, M, Shimada, H, Yamashita, K, Nishizawa, T, Nureki, O.
登録日2019-12-26
公開日2020-07-29
最終更新日2020-09-09
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM structures of calcium homeostasis modulator channels in diverse oligomeric assemblies.
Sci Adv, 6, 2020
6LPJ
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BU of 6lpj by Molmil
A2AR crystallized in EROCOC17+4, LCP-SFX at 277 K
分子名称: 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol, Adenosine receptor A2a,Soluble cytochrome b562,Adenosine receptor A2a, CHOLESTEROL, ...
著者Ihara, K, Hato, M, Nakane, T, Yamashita, K, Kimura-Someya, T, Hosaka, T, Ishizuka-Katsura, Y, Tanaka, R, Tanaka, T, Sugahara, M, Hirata, K, Yamamoto, M, Nureki, O, Tono, K, Nango, E, Iwata, S, Shirouzu, M.
登録日2020-01-10
公開日2020-11-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Isoprenoid-chained lipid EROCOC 17+4 : a new matrix for membrane protein crystallization and a crystal delivery medium in serial femtosecond crystallography.
Sci Rep, 10, 2020
6LMT
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BU of 6lmt by Molmil
Cryo-EM structure of the killifish CALHM1
分子名称: CHOLESTEROL HEMISUCCINATE, Calcium homeostasis modulator 1
著者Demura, K, Kusakizako, T, Shihoya, W, Hiraizumi, M, Shimada, H, Yamashita, K, Nishizawa, T, Nureki, O.
登録日2019-12-26
公開日2020-07-29
最終更新日2020-09-09
実験手法ELECTRON MICROSCOPY (2.66 Å)
主引用文献Cryo-EM structures of calcium homeostasis modulator channels in diverse oligomeric assemblies.
Sci Adv, 6, 2020
1J09
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BU of 1j09 by Molmil
Crystal structure of Thermus thermophilus glutamyl-tRNA synthetase complexed with ATP and Glu
分子名称: ADENOSINE-5'-TRIPHOSPHATE, GLUTAMIC ACID, Glutamyl-tRNA synthetase, ...
著者Sekine, S, Nureki, O, Dubois, D.Y, Bernier, S, Chenevert, R, Lapointe, J, Vassylyev, D.G, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-11-12
公開日2003-02-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献ATP binding by glutamyl-tRNA synthetase is switched to the productive mode by tRNA binding
EMBO J., 22, 2003

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