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3DHB
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BU of 3dhb by Molmil
1.4 Angstrom Structure of N-Acyl Homoserine Lactone Hydrolase with the Product N-Hexanoyl-L-Homoserine Bound at The Catalytic Metal Center
分子名称: GLYCEROL, N-Acyl Homoserine Lactone Hydrolase, N-hexanoyl-L-homoserine, ...
著者Liu, D, Momb, J, Thomas, P.W, Moulin, A, Petsko, G.A, Fast, W, Ringe, D.
登録日2008-06-17
公開日2008-07-29
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Mechanism of the quorum-quenching lactonase (AiiA) from Bacillus thuringiensis. 1. Product-bound structures.
Biochemistry, 47, 2008
8JPA
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BU of 8jpa by Molmil
De novo design cavitated protein without predefined topology
分子名称: De novo design cavitated protein
著者Hu, X, Xu, Y.
登録日2023-06-11
公開日2023-06-28
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献De novo design of cavity-containing proteins with a backbone-centered neural network energy function.
Structure, 32, 2024
7YKF
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BU of 7ykf by Molmil
Crystal structure of MAGI2 PDZ0-GK/pEphexin4 complex
分子名称: Ephexin4, Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2
著者Zhang, M, Lin, L, Zhu, J.
登録日2022-07-22
公開日2023-08-02
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Phosphorylation-dependent recognition of diverse protein targets by the cryptic GK domain of MAGI MAGUKs.
Sci Adv, 9, 2023
7YKI
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BU of 7yki by Molmil
Crystal structure of MAGI2 PDZ0-GK domain in complex with phospho-SAPAP1 GBR3 peptide
分子名称: GLYCEROL, Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2, ...
著者Zhang, M, Lin, L, Zhu, J.
登録日2022-07-22
公開日2023-08-02
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Phosphorylation-dependent recognition of diverse protein targets by the cryptic GK domain of MAGI MAGUKs.
Sci Adv, 9, 2023
7YKG
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BU of 7ykg by Molmil
Crystal structure of MAGI2 PDZ0-GK/pSGEF complex
分子名称: Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2, SGEF
著者Zhang, M, Lin, L, Zhu, J.
登録日2022-07-22
公開日2023-08-02
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Phosphorylation-dependent recognition of diverse protein targets by the cryptic GK domain of MAGI MAGUKs.
Sci Adv, 9, 2023
7YKH
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BU of 7ykh by Molmil
Crystal structure of MAGI2 PDZ0-GK domain in complex with phospho-SAPAP1 GBR2 peptide
分子名称: GLYCEROL, Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2, ...
著者Zhang, M, Lin, L, Zhu, J.
登録日2022-07-22
公開日2023-08-16
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Phosphorylation-dependent recognition of diverse protein targets by the cryptic GK domain of MAGI MAGUKs.
Sci Adv, 9, 2023
8JTR
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BU of 8jtr by Molmil
Cryo-EM structure of GeoCas9-sgRNA binary complex
分子名称: CRISPR-associated endonuclease Cas9, sgRNA (139-bp)
著者Shen, P.P, Liu, B.B, Li, X, Zhang, L.L, Chen, C.-C, Guo, R.-T.
登録日2023-06-22
公開日2024-06-05
最終更新日2024-12-18
実験手法ELECTRON MICROSCOPY (3.21 Å)
主引用文献Structure of Geobacillus stearothermophilus Cas9: Insights into the Catalytic Process and Thermostability of CRISPR-Cas9
Acs Catalysis, 14, 2024
8JTJ
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BU of 8jtj by Molmil
Cryo-EM structure of GeoCas9-sgRNA-dsDNA ternary complex
分子名称: CRISPR-associated endonuclease Cas9, DNA (29-MER), DNA (5'-D(P*GP*GP*GP*CP*GP*CP*GP*AP*A)-3'), ...
著者Shen, P.P, Liu, B.B, Li, X, Zhang, L.L, Chen, C.-C, Guo, R.-T.
登録日2023-06-21
公開日2024-06-05
最終更新日2024-12-18
実験手法ELECTRON MICROSCOPY (3.08 Å)
主引用文献Structure of Geobacillus stearothermophilus Cas9: Insights into the Catalytic Process and Thermostability of CRISPR-Cas9
Acs Catalysis, 14, 2024
7XEX
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BU of 7xex by Molmil
Crystal strucutre of apoCasDinG
分子名称: CasDinG
著者Zhang, J.T, Cui, N, Liu, Y.R, Huang, H.D, Jia, N.
登録日2022-03-31
公開日2023-07-26
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Type IV-A CRISPR-Csf complex: Assembly, dsDNA targeting, and CasDinG recruitment.
Mol.Cell, 83, 2023
7XF0
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BU of 7xf0 by Molmil
Crystal strucutre of CasDinG in complex with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, CasDinG
著者Zhang, J.T, Cui, N, Liu, Y.R, Huang, H.D, Jia, N.
登録日2022-03-31
公開日2023-07-26
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Type IV-A CRISPR-Csf complex: Assembly, dsDNA targeting, and CasDinG recruitment.
Mol.Cell, 83, 2023
7XF1
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BU of 7xf1 by Molmil
Crystal strucutre of apoCasDinG in complex with ssDNA
分子名称: CasDinG, DNA (5'-D(*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3')
著者Zhang, J.T, Cui, N, Liu, Y.R, Huang, H.D, Jia, N.
登録日2022-03-31
公開日2023-07-26
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Type IV-A CRISPR-Csf complex: Assembly, dsDNA targeting, and CasDinG recruitment.
Mol.Cell, 83, 2023
7XG3
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BU of 7xg3 by Molmil
CryoEM structure of type IV-A CasDinG bound NTS-nicked Csf-crRNA-dsDNA quaternary complex
分子名称: Csf1, Csf2, Csf3, ...
著者Zhang, J.T, Cui, N, Huang, H.D, Jia, N.
登録日2022-04-02
公開日2023-08-09
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Type IV-A CRISPR-Csf complex: Assembly, dsDNA targeting, and CasDinG recruitment.
Mol.Cell, 83, 2023
7XG1
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BU of 7xg1 by Molmil
CryoEM structure of type IV-A Csf-crRNA binary complex
分子名称: Csf1, Csf2, Csf3, ...
著者Zhang, J.T, Cui, N, Huang, H.D, Jia, N.
登録日2022-04-02
公開日2023-08-02
最終更新日2024-10-09
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Type IV-A CRISPR-Csf complex: Assembly, dsDNA targeting, and CasDinG recruitment
Mol.Cell, 83, 2023
7XFZ
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BU of 7xfz by Molmil
CryoEM structure of type IV-A Csf-crRNAsp14-dsDNA ternary complex
分子名称: Csf1, Csf2, Csf3, ...
著者Zhang, J.T, Cui, N, Huang, H.D, Jia, N.
登録日2022-04-02
公開日2023-08-09
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Type IV-A CRISPR-Csf complex: Assembly, dsDNA targeting, and CasDinG recruitment.
Mol.Cell, 83, 2023
7XG0
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BU of 7xg0 by Molmil
CryoEM structure of type IV-A Csf-crRNA-dsDNA ternary complex
分子名称: Csf1, Csf2, Csf3, ...
著者Zhang, J.T, Cui, N, Huang, H.D, Jia, N.
登録日2022-04-02
公開日2023-08-09
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Type IV-A CRISPR-Csf complex: Assembly, dsDNA targeting, and CasDinG recruitment.
Mol.Cell, 83, 2023
7XG4
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BU of 7xg4 by Molmil
CryoEM structure of type IV-A CasDinG bound NTS-nicked Csf-crRNA-dsDNA quaternary complex in a second state
分子名称: Csf1, Csf2, Csf3, ...
著者Zhang, J.T, Cui, N, Huang, H.D, Jia, N.
登録日2022-04-02
公開日2023-08-09
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Type IV-A CRISPR-Csf complex: Assembly, dsDNA targeting, and CasDinG recruitment.
Mol.Cell, 83, 2023
7XG2
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BU of 7xg2 by Molmil
CryoEM structure of type IV-A NTS-nicked dsDNA bound Csf-crRNA ternary complex
分子名称: Csf1, Csf2, Csf3, ...
著者Zhang, J.T, Cui, N, Huang, H.D, Jia, N.
登録日2022-04-02
公開日2023-08-09
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Type IV-A CRISPR-Csf complex: Assembly, dsDNA targeting, and CasDinG recruitment.
Mol.Cell, 83, 2023
7D3W
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BU of 7d3w by Molmil
Non-specific and specific interactions work cooperatively to promote cytidine deamination catalyzed by APOBEC3A
分子名称: DNA (5'-D(*AP*TP*TP*TP*TP*CP*AP*AP*TP*T)-3'), DNA dC->dU-editing enzyme APOBEC-3A, ZINC ION
著者Cao, C, Liu, Y, Lan, W.
登録日2020-09-21
公開日2021-10-06
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Two different kinds of interaction modes of deaminase APOBEC3A with single-stranded DNA in solution detected by nuclear magnetic resonance.
Protein Sci., 31, 2022
7D3X
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BU of 7d3x by Molmil
Non-specific and specific interactions work cooperatively to promote cytidine deamination catalyzed by APOBEC3A
分子名称: DNA (5'-D(*AP*TP*TP*TP*TP*CP*AP*AP*TP*T)-3'), DNA dC->dU-editing enzyme APOBEC-3A, ZINC ION
著者Cao, C, Liu, Y.
登録日2020-09-21
公開日2021-10-06
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Two different kinds of interaction modes of deaminase APOBEC3A with single-stranded DNA in solution detected by nuclear magnetic resonance.
Protein Sci., 31, 2022
8KGN
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BU of 8kgn by Molmil
Structure of African swine fever virus topoisomerase II in complex with dsDNA
分子名称: DNA (38-MER), DNA topoisomerase 2
著者Cong, J, Xin, Y, Li, X, Chen, Y.
登録日2023-08-19
公開日2024-04-03
最終更新日2025-06-18
実験手法ELECTRON MICROSCOPY (5.9 Å)
主引用文献Structural insights into the DNA topoisomerase II of the African swine fever virus.
Nat Commun, 15, 2024
8KGT
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BU of 8kgt by Molmil
Structure of African swine fever virus topoisomerase II in complex with dsDNA
分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA topoisomerase 2
著者Cong, J, Xin, Y, Li, X, Chen, Y.
登録日2023-08-19
公開日2024-04-03
最終更新日2024-08-14
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural insights into the DNA topoisomerase II of the African swine fever virus.
Nat Commun, 15, 2024
8KGS
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BU of 8kgs by Molmil
Structure of African swine fever virus topoisomerase II in complex with dsDNA
分子名称: DNA topoisomerase 2, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Cong, J, Xin, Y, Li, X, Chen, Y.
登録日2023-08-19
公開日2024-04-03
最終更新日2024-08-14
実験手法X-RAY DIFFRACTION (2.603 Å)
主引用文献Structural insights into the DNA topoisomerase II of the African swine fever virus.
Nat Commun, 15, 2024
8KGL
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BU of 8kgl by Molmil
Structure of African swine fever virus topoisomerase II
分子名称: DNA topoisomerase 2
著者Cong, J, Xin, Y, Li, X, Chen, Y.
登録日2023-08-19
公開日2024-04-03
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structural insights into the DNA topoisomerase II of the African swine fever virus.
Nat Commun, 15, 2024
8KGO
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BU of 8kgo by Molmil
Structure of African swine fever virus topoisomerase II in complex with dsDNA
分子名称: DNA topoisomerase 2
著者Chen, Y, Xin, Y, Li, X, Cong, J.
登録日2023-08-19
公開日2024-04-03
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural insights into the DNA topoisomerase II of the African swine fever virus.
Nat Commun, 15, 2024
8KGR
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BU of 8kgr by Molmil
Structure of African swine fever virus topoisomerase II in complex with dsDNA
分子名称: DNA (32-MER), DNA (33-MER), DNA topoisomerase 2, ...
著者Cong, J, Xin, U, Li, X, Chen, Y.
登録日2023-08-19
公開日2024-04-03
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural insights into the DNA topoisomerase II of the African swine fever virus.
Nat Commun, 15, 2024

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