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1WMG
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Crystal structure of the UNC5H2 death domain
分子名称: SULFATE ION, SULFITE ION, netrin receptor Unc5h2
著者Handa, N, Murayama, K, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-07-09
公開日2005-01-09
最終更新日2011-11-16
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure of the UNC5H2 death domain
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
1WYQ
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BU of 1wyq by Molmil
Solution structure of the second CH domain of human spectrin beta chain, brain 2
分子名称: Spectrin beta chain, brain 2
著者Tomizawa, T, Kigawa, T, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-02-15
公開日2005-08-15
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the second CH domain of human spectrin beta chain, brain 2
To be Published
1WYR
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BU of 1wyr by Molmil
Solution structure of the CH domain of human Rho guanine nucleotide exchange factor 6
分子名称: Rho guanine nucleotide exchange factor 6
著者Tomizawa, T, Kigawa, T, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-02-15
公開日2005-08-15
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the CH domain of human Rho guanine nucleotide exchange factor 6
To be Published
1X4S
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BU of 1x4s by Molmil
Solution structure of zinc finger HIT domain in protein FON
分子名称: ZINC ION, Zinc finger HIT domain containing protein 2
著者He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-14
公開日2005-11-14
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the zinc finger HIT domain in protein FON
Protein Sci., 16, 2007
1X56
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Crystal structure of asparaginyl-tRNA synthetase from Pyrococcus horikoshii
分子名称: Asparaginyl-tRNA synthetase
著者Iwasaki, W, Sekine, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-15
公開日2006-05-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Structural Basis of the Water-assisted Asparagine Recognition by Asparaginyl-tRNA Synthetase.
J.Mol.Biol., 360, 2006
1WQ5
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BU of 1wq5 by Molmil
Crystal structure of tryptophan synthase alpha-subunit from Escherichia coli
分子名称: GLYCEROL, SULFATE ION, Tryptophan synthase alpha chain
著者Nishio, K, Morimoto, Y, Ishizuka, M, Ogasahara, K, Yutani, K, Tsukihara, T, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-09-22
公開日2005-02-15
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Conformational Changes in the alpha-Subunit Coupled to Binding of the beta(2)-Subunit of Tryptophan Synthase from Escherichia coli: Crystal Structure of the Tryptophan Synthase alpha-Subunit Alon
Biochemistry, 44, 2005
1WUQ
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Structure of GTP cyclohydrolase I Complexed with 8-oxo-GTP
分子名称: 8-OXO-GUANOSINE-5'-TRIPHOSPHATE, GTP cyclohydrolase I, ZINC ION
著者Tanaka, Y, Nakagawa, N, Masui, R, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-12-08
公開日2005-07-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Novel reaction mechanism of GTP cyclohydrolase I. High-resolution X-ray crystallography of Thermus thermophilus HB8 enzyme complexed with a transition state analogue, the 8-oxoguanine derivative
J.Biochem.(Tokyo), 138, 2005
1WYM
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Solution structure of the CH domain of human transgelin-2
分子名称: Transgelin-2
著者Tomizawa, T, Kigawa, T, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-02-15
公開日2005-08-15
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the CH domain of human transgelin-2
To be Published
1X55
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Crystal structure of asparaginyl-tRNA synthetase from Pyrococcus horikoshii complexed with asparaginyl-adenylate analogue
分子名称: 5'-O-[N-(L-ASPARAGINYL)SULFAMOYL]ADENOSINE, Asparaginyl-tRNA synthetase, MAGNESIUM ION, ...
著者Iwasaki, W, Sekine, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-15
公開日2006-05-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Basis of the Water-assisted Asparagine Recognition by Asparaginyl-tRNA Synthetase.
J.Mol.Biol., 360, 2006
1WFQ
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Solution structure of the first cold-shock domain of the human KIAA0885 protein (UNR protein)
分子名称: UNR protein
著者Goroncy, A.K, Kigawa, T, Koshiba, S, Tomizawa, T, Kobayashi, N, Tochio, N, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-26
公開日2004-11-26
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献The NMR solution structures of the five constituent cold-shock domains (CSD) of the human UNR (upstream of N-ras) protein.
J.Struct.Funct.Genom., 11, 2010
1WJX
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Crystal sturucture of TT0801 from Thermus thermophilus
分子名称: POTASSIUM ION, SsrA-binding protein
著者Bessho, Y, Shibata, R, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-29
公開日2004-11-29
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis for functional mimicry of long-variable-arm tRNA by transfer-messenger RNA.
Proc.Natl.Acad.Sci.Usa, 104, 2007
1WN2
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Crystal structure of project ID PH1539 from Pyrococcus horikoshii OT3
分子名称: Peptidyl-tRNA hydrolase, SODIUM ION
著者Shimizu, K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-07-26
公開日2005-07-19
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structure of peptidyl-tRNA hydrolase 2 from Pyrococcus horikoshii OT3: insight into the functional role of its dimeric state.
Acta Crystallogr.,Sect.D, 64, 2008
1UDM
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BU of 1udm by Molmil
Solution structure of Coactosin-like protein (Cofilin family) from Mus Musculus
分子名称: Coactosin-like protein
著者Goroncy, A.K, Kigawa, T, Koshiba, S, Kobayashi, N, Tochio, N, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-05-01
公開日2004-05-18
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献NMR solution structures of actin depolymerizing factor homology domains.
Protein Sci., 18, 2009
1WEO
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BU of 1weo by Molmil
Solution structure of RING-finger in the catalytic subunit (IRX3) of cellulose synthase
分子名称: ZINC ION, cellulose synthase, catalytic subunit (IRX3)
著者He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-25
公開日2004-11-25
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of RING-finger in the catalytic subunit (IRX3) of cellulose synthase
To be Published
1WP4
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Structure of TT368 protein from Thermus Thermophilus HB8
分子名称: 3-hydroxyisobutyrate dehydrogenase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SULFATE ION
著者Lokanath, N.K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-08-30
公開日2005-08-30
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Novel NADP-dependent 3-Hydroxyisobutyrate Dehydrogenase from Thermus thermophilus HB8
J.Mol.Biol., 352, 2005
1WWH
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Crystal structure of the MPPN domain of mouse Nup35
分子名称: nucleoporin 35
著者Handa, N, Murayama, K, Kukimoto, M, Hamana, H, Uchikubo, T, Takemoto, C, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-01-05
公開日2005-07-05
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The crystal structure of mouse Nup35 reveals atypical RNP motifs and novel homodimerization of the RRM domain
J.Mol.Biol., 363, 2006
1X01
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Crystal Structure Of Biotin Protein Ligase From Pyrococcus Horikoshii Ot3 in complex with ATP
分子名称: ACETIC ACID, ADENOSINE-5'-TRIPHOSPHATE, PHOSPHATE ION, ...
著者Bagautdinov, B, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-03-11
公開日2006-05-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Protein biotinylation visualized by a complex structure of biotin protein ligase with a substrate
J.Biol.Chem., 283, 2008
1X54
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Crystal structure of asparaginyl-tRNA synthetase from Pyrococcus horikoshii complexed with asparaginyl-adenylate
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-AMINO-1,4-DIOXOBUTAN-2-AMINIUM ADENOSINE-5'-MONOPHOSPHATE, Asparaginyl-tRNA synthetase, ...
著者Iwasaki, W, Sekine, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-15
公開日2006-05-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural Basis of the Water-assisted Asparagine Recognition by Asparaginyl-tRNA Synthetase.
J.Mol.Biol., 360, 2006
1WFI
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Nuclear move domain of nuclear distribution gene C homolog
分子名称: nuclear distribution gene C homolog
著者Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-26
公開日2004-11-26
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Nuclear move domain of nuclear distribution gene C homolog
TO BE PUBLISHED
1WM9
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Structure of GTP cyclohydrolase I from Thermus thermophilus HB8
分子名称: GTP cyclohydrolase I, ZINC ION
著者Tanaka, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-07-05
公開日2005-07-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Novel Reaction Mechanism of GTP Cyclohydrolase I. High-Resolution X-Ray Crystallography of Thermus thermophilus HB8 Enzyme Complexed with a Transition State Analogue, the 8-Oxoguanine Derivative.
J.Biochem.(Tokyo), 138, 2005
1WUR
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Structure of GTP cyclohydrolase I Complexed with 8-oxo-dGTP
分子名称: 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, GTP cyclohydrolase I, ZINC ION
著者Tanaka, Y, Nakagawa, N, Masui, R, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-12-08
公開日2005-07-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Novel reaction mechanism of GTP cyclohydrolase I. High-resolution X-ray crystallography of Thermus thermophilus HB8 enzyme complexed with a transition state analogue, the 8-oxoguanine derivative
J.Biochem.(Tokyo), 138, 2005
1WYP
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Solution structure of the CH domain of human Calponin 1
分子名称: Calponin 1
著者Tomizawa, T, Kigawa, T, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-02-15
公開日2005-08-15
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the CH domain of human Calponin 1
To be Published
1X0J
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Crystal structure analysis of the N-terminal bromodomain of human Brd2
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Bromodomain-containing protein 2
著者Nakamura, Y, Umehara, T, Shirouzu, M, Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-03-23
公開日2006-06-27
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for acetylated histone H4 recognition by the human Brd2 bromodomain
To be Published
1X5N
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Solution structure of the second PDZ domain of harmonin protein
分子名称: Harmonin
著者Qin, X.R, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-16
公開日2005-11-16
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the second PDZ domain of harmonin protein
To be published
1WJ2
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Solution Structure of the C-terminal WRKY Domain of AtWRKY4
分子名称: Probable WRKY transcription factor 4, ZINC ION
著者Yamasaki, K, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-28
公開日2004-11-28
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of an Arabidopsis WRKY DNA binding domain.
Plant Cell, 17, 2005

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