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5ZP7
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BU of 5zp7 by Molmil
Copper amine oxidase from Arthrobacter globiformis anaerobically reduced by ethylamine at pH 6 at 277 K (3)
分子名称: 1,2-ETHANEDIOL, COPPER (II) ION, Phenylethylamine oxidase, ...
著者Murakawa, T, Baba, S, Kawano, Y, Hayashi, H, Yano, T, Tanizawa, K, Kumasaka, T, Yamamoto, M, Okajima, T.
登録日2018-04-16
公開日2018-12-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.631 Å)
主引用文献In crystallothermodynamic analysis of conformational change of the topaquinone cofactor in bacterial copper amine oxidase.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
5ZPM
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BU of 5zpm by Molmil
Copper amine oxidase from Arthrobacter globiformis anaerobically reduced by phenylethylamine at pH 7 at 288 K (2)
分子名称: 1,2-ETHANEDIOL, COPPER (II) ION, Phenylethylamine oxidase, ...
著者Murakawa, T, Baba, S, Kawano, Y, Hayashi, H, Yano, T, Tanizawa, K, Kumasaka, T, Yamamoto, M, Okajima, T.
登録日2018-04-16
公開日2018-12-19
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献In crystallothermodynamic analysis of conformational change of the topaquinone cofactor in bacterial copper amine oxidase.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
4P79
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BU of 4p79 by Molmil
Crystal structure of mouse claudin-15
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Claudin-15
著者Suzuki, H, Nishizawa, T, Tani, K, Yamazaki, Y, Tamura, A, Ishitani, R, Dohmae, N, Tsukita, S, Nureki, O, Fujiyoshi, Y.
登録日2014-03-26
公開日2014-04-30
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of a claudin provides insight into the architecture of tight junctions.
Science, 344, 2014
6AGP
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BU of 6agp by Molmil
Structure of Rac1 in the low-affinity state for Mg2+
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Ras-related C3 botulinum toxin substrate 1
著者Toyama, Y, Kontani, K, Katada, T, Shimada, I.
登録日2018-08-13
公開日2019-03-20
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Conformational landscape alternations promote oncogenic activities of Ras-related C3 botulinum toxin substrate 1 as revealed by NMR.
Sci Adv, 5, 2019
1G3B
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BU of 1g3b by Molmil
BOVINE BETA-TRYPSIN BOUND TO META-AMIDINO SCHIFF BASE MAGNESIUM(II) CHELATE
分子名称: 2-(5-CARBAMIMIDOYL-2-HYDROXY-BENZYLAMINO)-PROPIONIC ACID, BETA-TRYPSIN, CALCIUM ION, ...
著者Toyota, E, Ng, K.K.S, Sekizaki, H, Itoh, K, Tanizawa, K, James, M.N.G.
登録日2000-10-23
公開日2001-01-17
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray crystallographic analyses of complexes between bovine beta-trypsin and Schiff base copper(II) or iron(III) chelates.
J.Mol.Biol., 305, 2001
1G3D
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BU of 1g3d by Molmil
BOVINE BETA-TRYPSIN BOUND TO META-AMIDINO SCHIFF BASE COPPER (II) CHELATE
分子名称: 2-(5-CARBAMIMIDOYL-2-HYDROXY-BENZYLAMINO)-PROPIONIC ACID, BETA-TRYPSIN, CALCIUM ION, ...
著者Toyota, E, Ng, K.K.S, Sekizaki, H, Itoh, K, Tanizawa, K, James, M.N.G.
登録日2000-10-23
公開日2001-01-17
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray crystallographic analyses of complexes between bovine beta-trypsin and Schiff base copper(II) or iron(III) chelates.
J.Mol.Biol., 305, 2001
1G3C
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BU of 1g3c by Molmil
BOVINE BETA-TRYPSIN BOUND TO PARA-AMIDINO SCHIFF BASE IRON(III) CHELATE
分子名称: 2-(4-CARBAMIMIDOYL-2-HYDROXY-BENZYLAMINO)-PROPIONIC ACID, BETA-TRYPSIN, CALCIUM ION, ...
著者Toyota, E, Ng, K.K.S, Sekizaki, H, Itoh, K, Tanizawa, K, James, M.N.G.
登録日2000-10-23
公開日2001-01-17
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray crystallographic analyses of complexes between bovine beta-trypsin and Schiff base copper(II) or iron(III) chelates.
J.Mol.Biol., 305, 2001
1G3E
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BU of 1g3e by Molmil
BOVINE BETA-TRYPSIN BOUND TO PARA-AMIDINO SCHIFF-BASE COPPER (II) CHELATE
分子名称: 2-(4-CARBAMIMIDOYL-2-HYDROXY-BENZYLAMINO)-PROPIONIC ACID, BETA-TRYPSIN, CALCIUM ION, ...
著者Toyota, E, Ng, K.K.S, Sekizaki, H, Itoh, K, Tanizawa, K, James, M.N.G.
登録日2000-10-23
公開日2001-01-17
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献X-ray crystallographic analyses of complexes between bovine beta-trypsin and Schiff base copper(II) or iron(III) chelates.
J.Mol.Biol., 305, 2001
2Z84
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BU of 2z84 by Molmil
Insights from crystal and solution structures of mouse UfSP1
分子名称: Ufm1-specific protease 1
著者Ha, B.H, Ahn, H.C, Kang, S.H, Tanaka, K, Chung, C.H, Kim, E.E.
登録日2007-08-30
公開日2008-03-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural basis for Ufm1 processing by UfSP1
J. Biol. Chem., 283, 2008
6KKA
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BU of 6kka by Molmil
Xylanase J mutant from Bacillus sp. 41M-1
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, ...
著者Suzuki, M, Takita, T, Nakatani, K.
登録日2019-07-24
公開日2019-09-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.36 Å)
主引用文献Increase in the thermostability of GH11 xylanase XynJ from Bacillus sp. strain 41M-1 using site saturation mutagenesis.
Enzyme.Microb.Technol., 130, 2019
2ZJD
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BU of 2zjd by Molmil
Crystal Structure of LC3-p62 complex
分子名称: Microtubule-associated proteins 1A/1B light chain 3B precursor, undecameric peptide from Sequestosome-1
著者Ichimura, Y, Kumanomidou, T, Sou, Y, Mizushima, T, Ezaki, J, Ueno, T, Kominami, E, Yamane, T, Tanaka, K, Komatsu, M.
登録日2008-03-05
公開日2008-06-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Structural Basis for Sorting Mechanism of p62 in Selective Autophagy
J.Biol.Chem., 283, 2008
2ZQA
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BU of 2zqa by Molmil
Cefotaxime acyl-intermediate structure of class a beta-lacta Toho-1 E166A/R274N/R276N triple mutant
分子名称: Beta-lactamase Toho-1, CEFOTAXIME, C3' cleaved, ...
著者Nitanai, Y, Shimamura, T, Uchiyama, T, Ishii, Y, Takehira, M, Yutani, K, Matsuzawa, H, Miyano, M.
登録日2008-08-07
公開日2009-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献Structural Basis of Extend Spectrum Beta-Lactamase in Correlation of Enzymatic Kinetics and Thermal Stability of Acyl-Intermediates
To be Published
2ZQD
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BU of 2zqd by Molmil
Ceftazidime acyl-intermediate structure of class a beta-lact Toho-1 E166A/R274N/R276N triple mutant
分子名称: ACYLATED CEFTAZIDIME, Beta-lactamase Toho-1, SULFATE ION
著者Nitanai, Y, Shimamura, T, Uchiyama, T, Ishii, Y, Takehira, M, Yutani, K, Matsuzawa, H, Miyano, M.
登録日2008-08-07
公開日2009-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献Structural Basis of Extend Spectrum Beta-Lactamase in Correlation of Enzymatic Kinetics and Thermal Stability of Acyl-Intermediates
To be Published
2ZOM
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BU of 2zom by Molmil
Crystal structure of CutA1 from Oryza sativa
分子名称: GLYCEROL, Protein CutA, chloroplast, ...
著者Kezuka, Y, Bagautdinov, B, Katoh, S, Ohtake, Y, Yutani, K, Nonaka, T, Katoh, E.
登録日2008-05-23
公開日2009-05-26
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.02 Å)
主引用文献Crystal structure of CutA1 from Oryza sativa
To be Published
3ASE
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BU of 3ase by Molmil
Crystal Structure of Zinc myoglobin soaked with Ru3O cluster
分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING ZN, SULFATE ION, ...
著者Koshiyama, T, Shirai, M, Hikage, T, Tabe, H, Tanaka, K, Kitagawa, S, Ueno, T.
登録日2010-12-11
公開日2011-04-27
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Post-Crystal Engineering of Zinc-Substituted Myoglobin to Construct a Long-Lived Photoinduced Charge-Separation System
Angew.Chem.Int.Ed.Engl., 2011
2ZQC
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BU of 2zqc by Molmil
Aztreonam acyl-intermediate structure of class a beta-lactam Toho-1 E166A/R274N/R276N triple mutant
分子名称: 2-({[(1Z)-1-(2-amino-1,3-thiazol-4-yl)-2-oxo-2-{[(2S,3S)-1-oxo-3-(sulfoamino)butan-2-yl]amino}ethylidene]amino}oxy)-2-methylpropanoic acid, Beta-lactamase Toho-1, SULFATE ION
著者Nitanai, Y, Shimamura, T, Uchiyama, T, Ishii, Y, Takehira, M, Yutani, K, Matsuzawa, H, Miyano, M.
登録日2008-08-07
公開日2009-07-28
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.07 Å)
主引用文献Structural Basis of Extend Spectrum Beta-Lactamase in Correlation of Enzymatic Kinetics and Thermal Stability of Acyl-Intermediates
To be Published
2YVC
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BU of 2yvc by Molmil
Crystal structure of the Radixin FERM domain complexed with the NEP cytoplasmic tail
分子名称: Neprilysin, Radixin
著者Terawaki, S, Kitano, K, Hakoshima, T.
登録日2007-04-11
公開日2007-04-24
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis for type II membrane protein binding by ERM proteins revealed by the radixin-neutral endopeptidase 24.11 (NEP) complex
J.Biol.Chem., 282, 2007
2Z9W
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BU of 2z9w by Molmil
Crystal structure of pyridoxamine-pyruvate aminotransferase complexed with pyridoxal
分子名称: 3-HYDROXY-5-(HYDROXYMETHYL)-2-METHYLISONICOTINALDEHYDE, Aspartate aminotransferase, GLYCEROL, ...
著者Yoshikane, Y, Yokochi, N, Yamasaki, M, Mizutani, K, Ohnishi, K, Mikami, B, Hayashi, H, Yagi, T.
登録日2007-09-26
公開日2007-11-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti MAFF303099
J.Biol.Chem., 283, 2008
6L9C
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BU of 6l9c by Molmil
Neutron structure of copper amine oxidase from Arthrobacter glibiformis at pD 7.4
分子名称: COPPER (II) ION, Phenylethylamine oxidase, SODIUM ION
著者Murakawa, T, Kurihara, K, Shoji, M, Shibazaki, C, Sunami, T, Tamada, T, Yano, N, Yamada, T, Kusaka, K, Suzuki, M, Shigeta, Y, Kuroki, R, Hayashi, H, Yano, Y, Tanizawa, K, Adachi, M, Okajima, T.
登録日2019-11-08
公開日2020-04-29
最終更新日2023-11-22
実験手法NEUTRON DIFFRACTION (1.14 Å), X-RAY DIFFRACTION
主引用文献Neutron crystallography of copper amine oxidase reveals keto/enolate interconversion of the quinone cofactor and unusual proton sharing.
Proc.Natl.Acad.Sci.USA, 117, 2020
2XZB
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BU of 2xzb by Molmil
Pig Gastric H,K-ATPase with bound BeF and SCH28080
分子名称: POTASSIUM-TRANSPORTING ATPASE ALPHA CHAIN 1, POTASSIUM-TRANSPORTING ATPASE SUBUNIT BETA
著者Abe, K, Tani, K, Fujiyoshi, Y.
登録日2010-11-24
公開日2011-01-26
最終更新日2020-09-16
実験手法ELECTRON CRYSTALLOGRAPHY (7 Å)
主引用文献Conformational Rearrangement of Gastric H(+),K(+)- ATPase Induced by an Acid Suppressant.
Nat.Commun., 2, 2011
2ZPH
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BU of 2zph by Molmil
Complex of Fe-type nitrile hydratase with tert-butylisonitrile, photo-activated for 340min at 293K
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FE (III) ION, MAGNESIUM ION, ...
著者Hashimoto, K, Suzuki, H, Taniguchi, K, Noguchi, T, Yohda, M, Odaka, M.
登録日2008-07-11
公開日2008-10-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile
J.Biol.Chem., 283, 2008
2Z9U
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BU of 2z9u by Molmil
Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti at 2.0 A resolution
分子名称: Aspartate aminotransferase, GLYCEROL, SULFATE ION
著者Yoshikane, Y, Yokochi, N, Yamasaki, M, Mizutani, K, Ohnishi, K, Mikami, B, Hayashi, H, Yagi, T.
登録日2007-09-26
公開日2007-11-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of pyridoxamine-pyruvate aminotransferase from Mesorhizobium loti MAFF303099
J.Biol.Chem., 283, 2008
2ZPB
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BU of 2zpb by Molmil
nitrosylated Fe-type nitrile hydratase
分子名称: FE (III) ION, MAGNESIUM ION, NITRIC OXIDE, ...
著者Hashimoto, K, Suzuki, H, Taniguchi, K, Noguchi, T, Yohda, M, Odaka, M.
登録日2008-07-09
公開日2008-10-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile
J.Biol.Chem., 283, 2008
2ZPI
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BU of 2zpi by Molmil
Complex of Fe-type nitrile hydratase with tert-butylisonitrile, photo-activated for 440min at 293K
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FE (III) ION, MAGNESIUM ION, ...
著者Hashimoto, K, Suzuki, H, Taniguchi, K, Noguchi, T, Yohda, M, Odaka, M.
登録日2008-07-11
公開日2008-10-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.491 Å)
主引用文献Catalytic mechanism of nitrile hydratase proposed by time-resolved X-ray crystallography using a novel substrate, tert-butylisonitrile
J.Biol.Chem., 283, 2008
2YN9
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BU of 2yn9 by Molmil
Cryo-EM structure of gastric H+,K+-ATPase with bound rubidium
分子名称: POTASSIUM-TRANSPORTING ATPASE ALPHA CHAIN 1, POTASSIUM-TRANSPORTING ATPASE SUBUNIT BETA
著者Abe, K, Tani, K, Friedrich, T, Fujiyoshi, Y.
登録日2012-10-13
公開日2012-11-07
最終更新日2014-07-16
実験手法ELECTRON CRYSTALLOGRAPHY (8 Å)
主引用文献Cryo-Em Structure of Gastric H+,K+-ATPase with a Single Occupied Cation-Binding Site.
Proc.Natl.Acad.Sci.USA, 109, 2012

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