Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6JUC
DownloadVisualize
BU of 6juc by Molmil
Aspergillus oryzae pro-tyrosinase oxygen-bound C92A/H103F mutant
分子名称: COPPER (II) ION, PEROXIDE ION, Tyrosinase
著者Fujieda, N, Umakoshi, K, Nishikawa, Y, Kurisu, G, Itoh, S.
登録日2019-04-13
公開日2020-05-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.44 Å)
主引用文献Copper-Oxygen Dynamics in the Tyrosinase Mechanism.
Angew.Chem.Int.Ed.Engl., 59, 2020
3QBG
DownloadVisualize
BU of 3qbg by Molmil
Anion-free blue form of pharaonis halorhodopsin
分子名称: BACTERIORUBERIN, Halorhodopsin, RETINAL, ...
著者Kouyama, T, Kanada, S.
登録日2011-01-13
公開日2011-08-31
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structures of an O-like blue form and an anion-free yellow form of pharaonis halorhodopsin
J.Mol.Biol., 413, 2011
7VLK
DownloadVisualize
BU of 7vlk by Molmil
eIF2B-SFSV NSs C2-imposed
分子名称: Non-structural protein NS-S, Translation initiation factor eIF-2B subunit alpha, Translation initiation factor eIF-2B subunit beta, ...
著者Kashiwagi, K, Ito, T.
登録日2021-10-04
公開日2021-12-01
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.27 Å)
主引用文献eIF2B-capturing viral protein NSs suppresses the integrated stress response.
Nat Commun, 12, 2021
6JU5
DownloadVisualize
BU of 6ju5 by Molmil
Aspergillus oryzae pro-tyrosinase C92A/F513Y mutant
分子名称: COPPER (II) ION, Tyrosinase
著者Fujieda, N, Umakoshi, K, Nishikawa, Y, Kurisu, G, Itoh, S.
登録日2019-04-13
公開日2020-05-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Copper-Oxygen Dynamics in the Tyrosinase Mechanism.
Angew.Chem.Int.Ed.Engl., 59, 2020
3OQJ
DownloadVisualize
BU of 3oqj by Molmil
Crystal structure of B. licheniformis CDPS yvmC-BLIC in complex with CAPSO
分子名称: (2S)-3-(cyclohexylamino)-2-hydroxypropane-1-sulfonic acid, Putative uncharacterized protein yvmC
著者Bonnefond, L, Arai, T, Suzuki, T, Ishitani, R, Nureki, O.
登録日2010-09-03
公開日2011-02-23
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.399 Å)
主引用文献Structural basis for nonribosomal peptide synthesis by an aminoacyl-tRNA synthetase paralog.
Proc.Natl.Acad.Sci.USA, 108, 2011
6JU9
DownloadVisualize
BU of 6ju9 by Molmil
Aspergillus oryzae active-tyrosinase copper-bound C92A mutant complexed with L-tyrosine
分子名称: 3,4-DIHYDROXYPHENYLALANINE, COPPER (II) ION, NITRATE ION, ...
著者Fujieda, N, Umakoshi, K, Nishikawa, Y, Kurisu, G, Itoh, S.
登録日2019-04-13
公開日2020-05-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Copper-Oxygen Dynamics in the Tyrosinase Mechanism.
Angew.Chem.Int.Ed.Engl., 59, 2020
7DTI
DownloadVisualize
BU of 7dti by Molmil
Solution structure of the complex between RNA polymerase subunit RPB6 and TFIIH p62 PH domain
分子名称: DNA-directed RNA polymerases I, II, and III subunit RPABC2, ...
著者Okuda, M, Nishimura, Y.
登録日2021-01-05
公開日2022-08-10
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Three human RNA polymerases interact with TFIIH via a common RPB6 subunit.
Nucleic Acids Res., 50, 2022
7DTH
DownloadVisualize
BU of 7dth by Molmil
Solution structure of RPB6, common subunit of RNA polymerases I, II, and III
分子名称: DNA-directed RNA polymerases I, II, and III subunit RPABC2
著者Okuda, M, Nishimura, Y.
登録日2021-01-05
公開日2022-01-19
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Three human RNA polymerases interact with TFIIH via a common RPB6 subunit.
Nucleic Acids Res., 50, 2022
4ENX
DownloadVisualize
BU of 4enx by Molmil
Crystal Structure of Pim-1 Kinase in complex with inhibitor (2E,5Z)-2-(2-chlorophenylimino)-5-(4-hydroxy-3-nitrobenzylidene)thiazolidin-4-one
分子名称: (2Z,5Z)-2-[(2-chlorophenyl)imino]-5-(4-hydroxy-3-nitrobenzylidene)-1,3-thiazolidin-4-one, PHOSPHATE ION, Serine/threonine-protein kinase pim-1
著者Parker, L.J, Handa, N, Yokoyama, S.
登録日2012-04-13
公開日2012-08-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Flexibility of the P-loop of Pim-1 kinase: observation of a novel conformation induced by interaction with an inhibitor
Acta Crystallogr.,Sect.F, 68, 2012
6JU7
DownloadVisualize
BU of 6ju7 by Molmil
Aspergillus oryzae active-tyrosinase copper-depleted C92A mutant complexed with L-tyrosine
分子名称: NITRATE ION, TYROSINE, Tyrosinase
著者Fujieda, N, Umakoshi, K, Nishikawa, Y, Kurisu, G, Itoh, S.
登録日2019-04-13
公開日2020-05-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Copper-Oxygen Dynamics in the Tyrosinase Mechanism.
Angew.Chem.Int.Ed.Engl., 59, 2020
6JU4
DownloadVisualize
BU of 6ju4 by Molmil
Aspergillus oryzae pro-tyrosinase F513Y mutant
分子名称: COPPER (II) ION, Tyrosinase
著者Fujieda, N, Umakoshi, K, Nishikawa, Y, Kurisu, G, Itoh, S.
登録日2019-04-13
公開日2020-05-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Copper-Oxygen Dynamics in the Tyrosinase Mechanism.
Angew.Chem.Int.Ed.Engl., 59, 2020
6JUA
DownloadVisualize
BU of 6jua by Molmil
Aspergillus oryzae pro-tyrosinase oxygen-bound C92A mutant
分子名称: COPPER (II) ION, PEROXIDE ION, Tyrosinase
著者Fujieda, N, Umakoshi, K, Nishikawa, Y, Kurisu, G, Itoh, S.
登録日2019-04-13
公開日2020-05-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Copper-Oxygen Dynamics in the Tyrosinase Mechanism.
Angew.Chem.Int.Ed.Engl., 59, 2020
7F36
DownloadVisualize
BU of 7f36 by Molmil
TacT complexed with acetyl-glycyl-tRNAGly
分子名称: ACETYLAMINO-ACETIC ACID, CALCIUM ION, N-acetyltransferase domain-containing protein, ...
著者Yashiro, Y, Tomita, K.
登録日2021-06-15
公開日2021-12-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.098 Å)
主引用文献Molecular basis of glycyl-tRNAGly acetylation by TacT from Salmonella Typhimurium
Cell Rep, 37, 2021
7F37
DownloadVisualize
BU of 7f37 by Molmil
Crystal structure of AtaT2-AtaR2 complex
分子名称: DUF1778 domain-containing protein, GNAT family N-acetyltransferase
著者Yashiro, Y, Tomita, K.
登録日2021-06-15
公開日2021-12-22
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.896 Å)
主引用文献Molecular basis of glycyl-tRNAGly acetylation by TacT from Salmonella Typhimurium
Cell Rep, 37, 2021
6JU8
DownloadVisualize
BU of 6ju8 by Molmil
Aspergillus oryzae active-tyrosinase copper-bound C92A mutant
分子名称: COPPER (II) ION, NITRATE ION, Tyrosinase
著者Fujieda, N, Umakoshi, K, Nishikawa, Y, Kurisu, G, Itoh, S.
登録日2019-04-13
公開日2020-05-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献Copper-Oxygen Dynamics in the Tyrosinase Mechanism.
Angew.Chem.Int.Ed.Engl., 59, 2020
6JUB
DownloadVisualize
BU of 6jub by Molmil
Radiation damage in Aspergillus oryzae pro-tyrosinase oxygen-bound C92A mutant
分子名称: COPPER (II) ION, PEROXIDE ION, Tyrosinase
著者Fujieda, N, Umakoshi, K, Nishikawa, Y, Kurisu, G, Itoh, S.
登録日2019-04-13
公開日2020-05-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Copper-Oxygen Dynamics in the Tyrosinase Mechanism.
Angew.Chem.Int.Ed.Engl., 59, 2020
4ENY
DownloadVisualize
BU of 4eny by Molmil
Crystal Structure of Pim-1 kinase in complex with (2E,5Z)-2-(2-chlorophenylimino)-5-(4-hydroxy-3-methoxybenzylidene)thiazolidin-4-one
分子名称: (2Z,5Z)-2-[(2-chlorophenyl)imino]-5-(4-hydroxy-3-methoxybenzylidene)-1,3-thiazolidin-4-one, DIMETHYL SULFOXIDE, GLYCEROL, ...
著者Parker, L.J, Handa, N, Yokoyama, S.
登録日2012-04-13
公開日2012-08-08
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.801 Å)
主引用文献Flexibility of the P-loop of Pim-1 kinase: observation of a novel conformation induced by interaction with an inhibitor
Acta Crystallogr.,Sect.F, 68, 2012
1JQM
DownloadVisualize
BU of 1jqm by Molmil
Fitting of L11 protein and elongation factor G (EF-G) in the cryo-em map of e. coli 70S ribosome bound with EF-G, GDP and fusidic acid
分子名称: 50S Ribosomal protein L11, Elongation Factor G
著者Agrawal, R.K, Linde, J, Segupta, J, Nierhaus, K.H, Frank, J.
登録日2001-08-07
公開日2001-09-07
最終更新日2024-02-07
実験手法ELECTRON MICROSCOPY (18 Å)
主引用文献Localization of L11 protein on the ribosome and elucidation of its involvement in EF-G-dependent translocation.
J.Mol.Biol., 311, 2001
1TBN
DownloadVisualize
BU of 1tbn by Molmil
NMR STRUCTURE OF A PROTEIN KINASE C-G PHORBOL-BINDING DOMAIN, MINIMIZED AVERAGE STRUCTURE
分子名称: PROTEIN KINASE C, GAMMA TYPE, ZINC ION
著者Xu, R.X, Pawelczyk, T, Xia, T, Brown, S.C.
登録日1997-04-15
公開日1998-04-29
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR structure of a protein kinase C-gamma phorbol-binding domain and study of protein-lipid micelle interactions.
Biochemistry, 36, 1997
1JQS
DownloadVisualize
BU of 1jqs by Molmil
Fitting of L11 protein and elongation factor G (domain G' and V) in the cryo-em map of E. coli 70S ribosome bound with EF-G and GMPPCP, a nonhydrolysable GTP analog
分子名称: 50S Ribosomal protein L11, Elongation Factor G
著者Agrawal, R.K, Linde, J, Segupta, J, Nierhaus, K.H, Frank, J.
登録日2001-08-07
公開日2001-09-07
最終更新日2024-02-07
実験手法ELECTRON MICROSCOPY (18 Å)
主引用文献Localization of L11 protein on the ribosome and elucidation of its involvement in EF-G-dependent translocation.
J.Mol.Biol., 311, 2001
1TBO
DownloadVisualize
BU of 1tbo by Molmil
NMR STRUCTURE OF A PROTEIN KINASE C-G PHORBOL-BINDING DOMAIN, 30 STRUCTURES
分子名称: PROTEIN KINASE C, GAMMA TYPE, ZINC ION
著者Xu, R.X, Pawelczyk, T, Xia, T, Brown, S.C.
登録日1997-04-15
公開日1998-04-29
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献NMR structure of a protein kinase C-gamma phorbol-binding domain and study of protein-lipid micelle interactions.
Biochemistry, 36, 1997
2IJY
DownloadVisualize
BU of 2ijy by Molmil
NMR structure ensemble for the reduced DsbA disulphide oxidoreductase from Vibrio Cholerae
分子名称: Thiol:disulfide interchange protein dsbA
著者Horne, J.H, Velkov, T, Scanlon, M.J.
登録日2006-10-02
公開日2007-07-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Probing the Flexibility of the DsbA Oxidoreductase from Vibrio cholerae-a (15)N - (1)H Heteronuclear NMR Relaxation Analysis of Oxidized and Reduced Forms of DsbA.
J.Mol.Biol., 371, 2007
6IIW
DownloadVisualize
BU of 6iiw by Molmil
Crystal structure of human UHRF1 PHD finger in complex with PAF15
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, E3 ubiquitin-protein ligase UHRF1, PCNA-associated factor, ...
著者Arita, K, Kori, S.
登録日2018-10-07
公開日2019-10-09
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.699 Å)
主引用文献Two distinct modes of DNMT1 recruitment ensure stable maintenance DNA methylation.
Nat Commun, 11, 2020
6IW3
DownloadVisualize
BU of 6iw3 by Molmil
High resolution structure of Dvl2-DIX Y27W/C80S mutant
分子名称: Segment polarity protein dishevelled homolog DVL-2
著者Yamanishi, K, Shibata, N.
登録日2018-12-04
公開日2019-02-20
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献High-resolution structure of a Y27W mutant of the Dishevelled2 DIX domain.
Acta Crystallogr F Struct Biol Commun, 75, 2019
7D83
DownloadVisualize
BU of 7d83 by Molmil
Crystal structure of HIV-1 integrase catalytic core domain in complex with 2-(tert-butoxy)-2-(2-(3-cyclohexylureido)-3,6-dimethyl-5-(5-methylchroman-6-yl)pyridin-4-yl)acetic acid
分子名称: (2S)-2-[2-(cyclohexylcarbamoylamino)-3,6-dimethyl-5-(5-methyl-3,4-dihydro-2H-chromen-6-yl)pyridin-4-yl]-2-[(2-methylpropan-2-yl)oxy]ethanoic acid, Integrase, SULFATE ION
著者Sugiyama, S, Sekiguchi, Y.
登録日2020-10-07
公開日2021-01-13
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.43 Å)
主引用文献Discovery of novel HIV-1 integrase-LEDGF/p75 allosteric inhibitors based on a pyridine scaffold forming an intramolecular hydrogen bond.
Bioorg.Med.Chem.Lett., 33, 2020

227111

件を2024-11-06に公開中

PDB statisticsPDBj update infoContact PDBjnumon