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7OFF
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BU of 7off by Molmil
Keap1 kelch domain bound to a small molecule inhibitor of the Keap1-Nrf2 protein-protein interaction
分子名称: (2~{R})-2-[(9-oxidanylidenefluoren-4-yl)carbonylamino]-2-phenyl-ethanoic acid, DIMETHYL SULFOXIDE, Kelch-like ECH-associated protein 1, ...
著者Narayanan, D, Bach, A, Gajhede, M.
登録日2021-05-04
公開日2022-11-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Development of Noncovalent Small-Molecule Keap1-Nrf2 Inhibitors by Fragment-Based Drug Discovery.
J.Med.Chem., 65, 2022
7OFB
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BU of 7ofb by Molmil
Keap1 kelch domain bound to a small molecule fragment
分子名称: DIMETHYL SULFOXIDE, Kelch-like ECH-associated protein 1, SULFATE ION, ...
著者Narayanan, D, Bach, A, Gajhede, M.
登録日2021-05-04
公開日2022-11-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Development of Noncovalent Small-Molecule Keap1-Nrf2 Inhibitors by Fragment-Based Drug Discovery.
J.Med.Chem., 65, 2022
7OFC
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BU of 7ofc by Molmil
Keap1 kelch domain bound to a small molecule fragment
分子名称: DIMETHYL SULFOXIDE, Kelch-like ECH-associated protein 1, SULFATE ION, ...
著者Narayanan, D, Bach, A, Gajhede, M.
登録日2021-05-04
公開日2022-11-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Development of Noncovalent Small-Molecule Keap1-Nrf2 Inhibitors by Fragment-Based Drug Discovery.
J.Med.Chem., 65, 2022
7OF8
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BU of 7of8 by Molmil
Keap1 kelch domain bound to a small molecule fragment
分子名称: (2~{S})-2-cyclopentyl-2-oxidanyl-2-phenyl-ethanoic acid, Kelch-like ECH-associated protein 1
著者Narayanan, D, Bach, A, Gajhede, M.
登録日2021-05-04
公開日2022-11-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Development of Noncovalent Small-Molecule Keap1-Nrf2 Inhibitors by Fragment-Based Drug Discovery.
J.Med.Chem., 65, 2022
6Y91
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BU of 6y91 by Molmil
Crystal structure of malate dehydrogenase from Plasmodium Falciparum in complex with NADH
分子名称: Malate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Romero, A.R, Calderone, V, Gentili, M, Lunev, S, Groves, M, Popowicz, G, Domling, A, Sattler, M.
登録日2020-03-06
公開日2021-03-31
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献A fragment-based approach identifies an allosteric pocket that impacts malate dehydrogenase activity.
Commun Biol, 4, 2021
6ZFW
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BU of 6zfw by Molmil
X-ray structure of the soluble N-terminal domain of T. cruzi PEX-14
分子名称: ACETATE ION, BETA-MERCAPTOETHANOL, GLYCEROL, ...
著者Softley, C.A, Ostertag, M.O, Sattler, M, Popowicz, G.P.
登録日2020-06-18
公開日2020-12-09
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Deep learning model predicts water interaction sites on the surface of proteins using limited-resolution data.
Chem.Commun.(Camb.), 56, 2020
7Q4Y
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BU of 7q4y by Molmil
human Gid4 bound to a Gly/N-peptide
分子名称: Glucose-induced degradation protein 4 homolog
著者Sherpa, D, Chrustowicz, J, Prabu, J.R, Schulman, B.A.
登録日2021-11-02
公開日2022-03-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.08 Å)
主引用文献Multifaceted N-Degron Recognition and Ubiquitylation by GID/CTLH E3 Ligases.
J.Mol.Biol., 434, 2022
7Q51
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BU of 7q51 by Molmil
yeast Gid10 bound to a Phe/N-peptide
分子名称: CHLORIDE ION, FWLPANLW peptide, Uncharacterized protein YGR066C
著者Chrustowicz, J, Sherpa, D, Prabu, J.R, Schulman, B.A.
登録日2021-11-02
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.22 Å)
主引用文献Multifaceted N-Degron Recognition and Ubiquitylation by GID/CTLH E3 Ligases.
J.Mol.Biol., 434, 2022
7Q50
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BU of 7q50 by Molmil
human Gid4 bound to a Phe/N-peptide
分子名称: FDVSWFMG peptide, Glucose-induced degradation protein 4 homolog
著者Chrustowicz, J, Sherpa, D, Loke, M.S, Prabu, J.R, Schulman, B.A.
登録日2021-11-02
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.16 Å)
主引用文献Multifaceted N-Degron Recognition and Ubiquitylation by GID/CTLH E3 Ligases.
J.Mol.Biol., 434, 2022
7Z0J
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BU of 7z0j by Molmil
human PEX13 SH3 domain in complex with internal FxxxF motif
分子名称: 1,2-ETHANEDIOL, Peroxisomal membrane protein PEX13
著者Gaussmann, S, Zak, K, Kreisz, N, Sattler, M.
登録日2022-02-23
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Intramolecular autoinhibition of human PEX13 modulates peroxisomal import
Biorxiv, 2022
7Z0K
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BU of 7z0k by Molmil
human PEX13 SH3 in complex with PEX5 W4 (WxxxF/Y) motif
分子名称: Peroxisomal membrane protein PEX13,Peroxisomal targeting signal 1 receptor
著者Gaussmann, S, Napolitano, V, sattler, M.
登録日2022-02-23
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Intramolecular autoinhibition of human PEX13 modulates peroxisomal import
Biorxiv, 2022
7Z0I
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BU of 7z0i by Molmil
human PEX13 SH3 domain
分子名称: 1,2-ETHANEDIOL, Peroxisomal membrane protein PEX13, ZINC ION
著者Gaussmann, S, Zak, K, Sattler, M.
登録日2022-02-23
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Intramolecular autoinhibition of human PEX13 modulates peroxisomal import
Biorxiv, 2022
7OD0
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BU of 7od0 by Molmil
Mirolysin in complex with compound 9
分子名称: 1,2-ETHANEDIOL, 2,1,3-benzothiadiazol-4-ylmethanamine, ACETATE ION, ...
著者Zak, K.M, Bostock, M.J, Ksiazek, M.
登録日2021-04-28
公開日2021-08-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Latency, thermal stability, and identification of an inhibitory compound of mirolysin, a secretory protease of the human periodontopathogen Tannerella forsythia .
J Enzyme Inhib Med Chem, 36, 2021
6GD3
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BU of 6gd3 by Molmil
Structure of HuR RRM3 in complex with RNA (UAUUUA)
分子名称: ELAV-like protein 1, RNA (5'-R(P*UP*AP*UP*UP*UP*A)-3'), SODIUM ION
著者Pabis, M, Sattler, M.
登録日2018-04-21
公開日2018-10-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献HuR biological function involves RRM3-mediated dimerization and RNA binding by all three RRMs.
Nucleic Acids Res., 47, 2019
6GD2
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BU of 6gd2 by Molmil
Structure of HuR RRM3 in complex with RNA
分子名称: ELAV-like protein 1, RNA (5'-R(P*UP*UP*UP*AP*UP*UP*U)-3')
著者Pabis, M, Sattler, M.
登録日2018-04-21
公開日2018-10-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献HuR biological function involves RRM3-mediated dimerization and RNA binding by all three RRMs.
Nucleic Acids Res., 47, 2019
6GD1
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BU of 6gd1 by Molmil
Structure of HuR RRM3
分子名称: SODIUM ION, Thioredoxin 1,ELAV-like protein 1
著者Pabis, M, Sattler, M.
登録日2018-04-21
公開日2018-10-31
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献HuR biological function involves RRM3-mediated dimerization and RNA binding by all three RRMs.
Nucleic Acids Res., 47, 2019
6G2K
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BU of 6g2k by Molmil
Structure of HuR RRM3 in complex with RNA (UUUUUU)
分子名称: ELAV-like protein 1, RNA (5'-R(P*UP*UP*UP*UP*UP*U)-3'), SULFATE ION
著者Pabis, M, Sattler, M.
登録日2018-03-23
公開日2018-10-31
最終更新日2019-05-15
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献HuR biological function involves RRM3-mediated dimerization and RNA binding by all three RRMs.
Nucleic Acids Res., 47, 2019
9EUR
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BU of 9eur by Molmil
Mpro WT from SARS-CoV-2 with 298Q mutation
分子名称: Replicase polyprotein 1a
著者Plewka, J, Lis, K, Czarna, A, Pyrc, K, Kantyka, T, Chykunova, Y.
登録日2024-03-28
公開日2024-04-17
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (2.113 Å)
主引用文献SARS-CoV-2 M pro oligomerization as a potential target for therapy.
Int.J.Biol.Macromol., 267, 2024
9EPL
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BU of 9epl by Molmil
Mpro from SARS-CoV-2 with 298Q mutation
分子名称: 1,2-ETHANEDIOL, GLYCEROL, Non-structural protein 11, ...
著者Plewka, J, Lis, K, Czarna, A, Pyrc, K, Kantyka, T, Chykunova, Y.
登録日2024-03-18
公開日2024-04-17
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献SARS-CoV-2 M pro oligomerization as a potential target for therapy.
Int.J.Biol.Macromol., 267, 2024
9EWO
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BU of 9ewo by Molmil
Mpro from SARS-CoV-2 with R4A R298A double mutations
分子名称: Non-structural protein 11, SULFATE ION
著者Plewka, J, Lis, K, Chykunova, Y, Czarna, A, Kantyka, T, Pyrc, K.
登録日2024-04-04
公開日2024-04-17
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (3.002 Å)
主引用文献SARS-CoV-2 M pro oligomerization as a potential target for therapy.
Int.J.Biol.Macromol., 267, 2024
9EWM
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BU of 9ewm by Molmil
Mpro from SARS-CoV-2 with R4Q R298Q double mutations
分子名称: Non-structural protein 11
著者Plewka, J, Lis, K, Chykunova, Y, Czarna, A, Kantyka, T, Pyrc, K.
登録日2024-04-04
公開日2024-04-24
実験手法X-RAY DIFFRACTION (2.63 Å)
主引用文献SARS-CoV-2 M pro oligomerization as a potential target for therapy.
Int.J.Biol.Macromol., 267, 2024
9EWN
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BU of 9ewn by Molmil
Mpro from SARS-CoV-2 with 4Q mutation
分子名称: Non-structural protein 11
著者Plewka, J, Lis, K, Czarna, A, Kantyka, T, Pyrc, K.
登録日2024-04-04
公開日2024-04-17
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (2.113 Å)
主引用文献SARS-CoV-2 M pro oligomerization as a potential target for therapy.
Int.J.Biol.Macromol., 267, 2024
9EUS
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BU of 9eus by Molmil
Mpro from SARS-CoV-2 with R298A mutation
分子名称: GLYCEROL, Replicase polyprotein 1a
著者Plewka, J, Lis, K, Czarna, A, Pyrc, K, Kantyka, T, Chykunova, Y.
登録日2024-03-28
公開日2024-04-17
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献SARS-CoV-2 M pro oligomerization as a potential target for therapy.
Int.J.Biol.Macromol., 267, 2024
9EPM
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BU of 9epm by Molmil
Mpro from SARS-CoV-2 with 4A mutation
分子名称: Non-structural protein 11
著者Plewka, J, Lis, K, Czarna, A, Pyrc, K, Kantyka, T, Chykunova, Y.
登録日2024-03-19
公開日2024-04-17
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (1.981 Å)
主引用文献SARS-CoV-2 M pro oligomerization as a potential target for therapy.
Int.J.Biol.Macromol., 267, 2024
6ZEZ
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BU of 6zez by Molmil
Keap1 kelch domain bound to a small molecule inhibitor of the Keap1-Nrf2 protein-protein interaction
分子名称: 1-[3-[(1~{R},3~{S})-3-[(2~{S})-2-butylpyrrolidin-1-yl]carbonylcyclohexyl]phenyl]-5-cyclopropyl-pyrazole-4-carboxylic acid, Kelch-like ECH-associated protein 1
著者Narayanan, D, Bach, A, Gajhede, M.
登録日2020-06-16
公開日2021-04-14
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Deconstructing Noncovalent Kelch-like ECH-Associated Protein 1 (Keap1) Inhibitors into Fragments to Reconstruct New Potent Compounds.
J.Med.Chem., 64, 2021

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件を2024-10-09に公開中

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