6ZFW

X-ray structure of the soluble N-terminal domain of T. cruzi PEX-14

Summary for 6ZFW

• Entry DOI: 10.2210/pdb6zfw/pdb
• Descriptor: Peroxin-14, BETA-MERCAPTOETHANOL, GLYCEROL, ... (5 entities in total)
• Functional Keywords: chagas disease, trypanosoma cruzi, glycosomal import, peroxisomes, protein transport
• Biological source: Trypanosoma cruzi
• Total number of polymer chains: 5
• Total formula weight: 40032.30

Authors

Softley, C.A.,Ostertag, M.O.,Sattler, M.,Popowicz, G.P. (deposition date: 2020-06-18, release date: 2020-12-09, Last modification date: 2024-01-24)

Primary citation

Zaucha, J.,Softley, C.A.,Sattler, M.,Frishman, D.,Popowicz, G.M.
Deep learning model predicts water interaction sites on the surface of proteins using limited-resolution data.
Chem.Commun.(Camb.), 56:15454-15457, 2020

PubMed Abstract: We develop a residual deep learning model, hotWater (https://pypi.org/project/hotWater/), to identify key water interaction sites on proteins for binding models and drug discovery. This is tested on new crystal structures, as well as cryo-EM and NMR structures from the PDB and in crystallographic refinement with promising results.

PubMed: 33237041
DOI: 10.1039/d0cc04383d

Experimental method

X-RAY DIFFRACTION (1.58 Å)