1IY1
| Crystal structure of the FtsH ATPase domain with ADP from Thermus thermophilus | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, ATP-dependent metalloprotease FtsH | 著者 | Niwa, H, Tsuchiya, D, Makyio, H, Yoshida, M, Morikawa, K. | 登録日 | 2002-07-10 | 公開日 | 2002-11-06 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Hexameric ring structure of the ATPase domain of the membrane-integrated metalloprotease FtsH from Thermus thermophilus HB8 Structure, 10, 2002
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1IY2
| Crystal structure of the FtsH ATPase domain from Thermus thermophilus | 分子名称: | ATP-dependent metalloprotease FtsH, SULFATE ION | 著者 | Niwa, H, Tsuchiya, D, Makyio, H, Yoshida, M, Morikawa, K. | 登録日 | 2002-07-10 | 公開日 | 2002-11-06 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (3.2 Å) | 主引用文献 | Hexameric ring structure of the ATPase domain of the membrane-integrated metalloprotease FtsH from Thermus thermophilus HB8 Structure, 10, 2002
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1IY0
| Crystal structure of the FtsH ATPase domain with AMP-PNP from Thermus thermophilus | 分子名称: | ATP-dependent metalloprotease FtsH, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | 著者 | Niwa, H, Tsuchiya, D, Makyio, H, Yoshida, M, Morikawa, K. | 登録日 | 2002-07-10 | 公開日 | 2002-11-06 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.95 Å) | 主引用文献 | Hexameric ring structure of the ATPase domain of the membrane-integrated metalloprotease FtsH from Thermus thermophilus HB8 Structure, 10, 2002
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1ISQ
| Pyrococcus furiosus PCNA complexed with RFCL PIP-box peptide | 分子名称: | Proliferating Cell Nuclear Antigen, replication factor C large subunit | 著者 | Matsumiya, S, Ishino, S, Ishino, Y, Morikawa, K. | 登録日 | 2001-12-19 | 公開日 | 2002-10-23 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | Physical interaction between proliferating cell nuclear antigen and
replication factor C from Pyrococcus furiosus Genes Cells, 7, 2002
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1IZ5
| Pyrococcus furiosus PCNA mutant (Met73Leu, Asp143Ala, Asp147Ala): orthorhombic form | 分子名称: | Proliferating cell nuclear antigen | 著者 | Matsumiya, S, Ishino, S, Ishino, Y, Morikawa, K. | 登録日 | 2002-09-23 | 公開日 | 2003-04-01 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Intermolecular ion pairs maintain the toroidal structure of Pyrococcus furiosus PCNA PROTEIN SCI., 12, 2003
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1AKL
| ALKALINE PROTEASE FROM PSEUDOMONAS AERUGINOSA IFO3080 | 分子名称: | ALKALINE PROTEASE, CALCIUM ION, ZINC ION | 著者 | Miyatake, H, Hata, Y, Fujii, T, Hamada, K, Morihara, K, Katsube, Y. | 登録日 | 1995-09-16 | 公開日 | 1996-03-08 | 最終更新日 | 2024-02-07 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Crystal structure of the unliganded alkaline protease from Pseudomonas aeruginosa IFO3080 and its conformational changes on ligand binding. J.Biochem.(Tokyo), 118, 1995
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4EIW
| Whole cytosolic region of atp-dependent metalloprotease FtsH (G399L) | 分子名称: | ADENOSINE-5'-DIPHOSPHATE, ATP-dependent zinc metalloprotease FtsH | 著者 | Suno, R, Niwa, H, Tsuchiya, D, Yoshida, M, Morikawa, K. | 登録日 | 2012-04-06 | 公開日 | 2012-06-06 | 最終更新日 | 2024-03-20 | 実験手法 | X-RAY DIFFRACTION (3.9 Å) | 主引用文献 | Structure of the whole cytosolic region of ATP-dependent protease FtsH Mol.Cell, 22, 2006
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1WP9
| Crystal structure of Pyrococcus furiosus Hef helicase domain | 分子名称: | ATP-dependent RNA helicase, putative, PHOSPHATE ION | 著者 | Nishino, T, Komori, K, Tsuchiya, D, Ishino, Y, Morikawa, K. | 登録日 | 2004-08-31 | 公開日 | 2005-02-01 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (2.9 Å) | 主引用文献 | Crystal Structure and Functional Implications of Pyrococcus furiosus Hef Helicase Domain Involved in Branched DNA Processing Structure, 13, 2005
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1GEF
| Crystal structure of the archaeal holliday junction resolvase HJC | 分子名称: | HOLLIDAY JUNCTION RESOLVASE, SULFATE ION | 著者 | Nishino, T, Komori, K, Tsuchiya, D, Ishino, Y, Morikawa, K. | 登録日 | 2000-11-08 | 公開日 | 2001-03-21 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Crystal structure of the archaeal holliday junction resolvase Hjc and implications for DNA recognition. Structure, 9, 2001
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1J23
| Crystal structure of archaeal XPF/Mus81 homolog, Hef from Pyrococcus furiosus, nuclease domain | 分子名称: | ATP-dependent RNA helicase, putative | 著者 | Nishino, T, Komori, K, Ishino, Y, Morikawa, K. | 登録日 | 2002-12-25 | 公開日 | 2003-04-22 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (1.78 Å) | 主引用文献 | X-Ray and Biochemical Anatomy of an Archaeal XPF/Rad1/Mus81 Family Nuclease. Similarity between Its Endonuclease Domain and Restriction Enzymes Structure, 11, 2003
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1X2I
| Crystal Structure Of Archaeal Xpf/Mus81 Homolog, Hef From Pyrococcus Furiosus, Helix-hairpin-helix Domain | 分子名称: | Hef helicase/nuclease | 著者 | Nishino, T, Komori, K, Ishino, Y, Morikawa, K. | 登録日 | 2005-04-24 | 公開日 | 2005-09-13 | 最終更新日 | 2024-03-13 | 実験手法 | X-RAY DIFFRACTION (1.45 Å) | 主引用文献 | Structural and Functional Analyses of an Archaeal XPF/Rad1/Mus81 Nuclease: Asymmetric DNA Binding and Cleavage Mechanisms STRUCTURE, 13, 2005
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1J25
| Crystal structure of archaeal XPF/Mus81 homolog, Hef from Pyrococcus furiosus, nuclease domain, Mn cocrystal | 分子名称: | ATP-dependent RNA helicase, putative, MANGANESE (II) ION | 著者 | Nishino, T, Komori, K, Ishino, Y, Morikawa, K. | 登録日 | 2002-12-25 | 公開日 | 2003-04-22 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (1.78 Å) | 主引用文献 | X-Ray and Biochemical Anatomy of an Archaeal XPF/Rad1/Mus81 Family Nuclease. Similarity between Its Endonuclease Domain and Restriction Enzymes Structure, 11, 2003
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1J24
| Crystal structure of archaeal XPF/Mus81 homolog, Hef from Pyrococcus furiosus, nuclease domain, Ca cocrystal | 分子名称: | ATP-dependent RNA helicase, putative, CALCIUM ION | 著者 | Nishino, T, Komori, K, Ishino, Y, Morikawa, K. | 登録日 | 2002-12-25 | 公開日 | 2003-04-22 | 最終更新日 | 2024-04-03 | 実験手法 | X-RAY DIFFRACTION (1.78 Å) | 主引用文献 | X-Ray and Biochemical Anatomy of an Archaeal XPF/Rad1/Mus81 Family Nuclease. Similarity between Its Endonuclease Domain and Restriction Enzymes Structure, 11, 2003
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1EQ5
| CRYSTAL STRUCTURES OF SALT BRIDGE MUTANTS OF HUMAN LYSOZYME | 分子名称: | LYSOZYME, SODIUM ION | 著者 | Takano, K, Tsuchimori, K, Yamagata, Y, Yutani, K. | 登録日 | 2000-04-03 | 公開日 | 2000-04-19 | 最終更新日 | 2024-10-09 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Contribution of salt bridges near the surface of a protein to the conformational stability. Biochemistry, 39, 2000
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1EQE
| CRYSTAL STRUCTURES OF SALT BRIDGE MUTANTS OF HUMAN LYSOZYME | 分子名称: | LYSOZYME, SODIUM ION | 著者 | Takano, K, Tsuchimori, K, Yamagata, Y, Yutani, K. | 登録日 | 2000-04-04 | 公開日 | 2000-04-19 | 最終更新日 | 2024-10-16 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Contribution of salt bridges near the surface of a protein to the conformational stability. Biochemistry, 39, 2000
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6KNB
| PolD-PCNA-DNA (form A) | 分子名称: | DNA polymerase D DP2 (DNA polymerase II large) subunit, DNA polymerase II small subunit, DNA polymerase sliding clamp 1, ... | 著者 | Mayanagi, K, Oki, K, Miyazaki, N, Ishino, S, Yamagami, T, Iwasaki, K, Kohda, D, Morikawa, K, Shirai, T, Ishino, Y. | 登録日 | 2019-08-05 | 公開日 | 2020-08-05 | 最終更新日 | 2021-02-17 | 実験手法 | ELECTRON MICROSCOPY (6.9 Å) | 主引用文献 | Two conformations of DNA polymerase D-PCNA-DNA, an archaeal replisome complex, revealed by cryo-electron microscopy. Bmc Biol., 18, 2020
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1KVD
| KILLER TOXIN FROM HALOTOLERANT YEAST | 分子名称: | SMK TOXIN, SULFATE ION | 著者 | Kashiwagi, T, Kunishima, N, Suzuki, C, Tsuchiya, F, Nikkuni, S, Arata, Y, Morikawa, K. | 登録日 | 1996-10-04 | 公開日 | 1997-04-01 | 最終更新日 | 2011-07-13 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | The novel acidophilic structure of the killer toxin from halotolerant yeast demonstrates remarkable folding similarity with a fungal killer toxin. Structure, 5, 1997
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1XPA
| SOLUTION STRUCTURE OF THE DNA-AND RPA-BINDING DOMAIN OF THE HUMAN REPAIR FACTOR XPA, NMR, 1 STRUCTURE | 分子名称: | XPA, ZINC ION | 著者 | Ikegami, T, Kuraoka, I, Saijo, M, Kodo, N, Kyogoku, Y, Morikawa, K, Tanaka, K, Shirakawa, M. | 登録日 | 1998-07-06 | 公開日 | 1999-07-22 | 最終更新日 | 2024-05-22 | 実験手法 | SOLUTION NMR | 主引用文献 | Solution structure of the DNA- and RPA-binding domain of the human repair factor XPA. Nat.Struct.Biol., 5, 1998
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1EQ4
| CRYSTAL STRUCTURES OF SALT BRIDGE MUTANTS OF HUMAN LYSOZYME | 分子名称: | LYSOZYME, SODIUM ION | 著者 | Takano, K, Tsuchimori, K, Yamagata, Y, Yutani, K. | 登録日 | 2000-04-03 | 公開日 | 2000-04-19 | 最終更新日 | 2021-11-03 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Contribution of salt bridges near the surface of a protein to the conformational stability. Biochemistry, 39, 2000
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1KVE
| KILLER TOXIN FROM HALOTOLERANT YEAST | 分子名称: | SMK TOXIN | 著者 | Kashiwagi, T, Kunishima, N, Suzuki, C, Tsuchiya, F, Nikkuni, S, Arata, Y, Morikawa, K. | 登録日 | 1996-10-04 | 公開日 | 1997-04-01 | 最終更新日 | 2024-10-16 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | The novel acidophilic structure of the killer toxin from halotolerant yeast demonstrates remarkable folding similarity with a fungal killer toxin. Structure, 5, 1997
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1ECR
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5JGB
| Crystal structure of human TAK1/TAB1 fusion protein in complex with ligand 10 | 分子名称: | N-(2-methoxy-4-{[3-(4-methylpiperazin-1-yl)propyl]carbamoyl}phenyl)-4-oxo-3,4-dihydrothieno[3,2-d]pyrimidine-7-carboxamide, TAK1 kinase - TAB1 chimera fusion protein | 著者 | Irie, M, Nakamura, M, Fukami, T.A, Matsuura, T, Morishima, K. | 登録日 | 2016-04-20 | 公開日 | 2016-07-27 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Discovery of a potent and highly selective transforming growth factor beta receptor-associated kinase 1 (TAK1) inhibitor by structure based drug design (SBDD) Bioorg.Med.Chem., 24, 2016
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5JGD
| Crystal structure of human TAK1/TAB1 fusion protein in complex with ligand 12 | 分子名称: | N-(2-isopropoxy-3-(4-methylpiperazine-1-carbonyl)phenyl)-4-oxo-3,4-dihydrothieno[3,2-d]pyrimidine-7-carboxamide, TAK1 kinase - TAB1 chimera fusion protein | 著者 | Irie, M, Nakamura, M, Fukami, T.A, Matsuura, T, Morishima, K. | 登録日 | 2016-04-20 | 公開日 | 2016-07-27 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (3.101 Å) | 主引用文献 | Discovery of a potent and highly selective transforming growth factor beta receptor-associated kinase 1 (TAK1) inhibitor by structure based drug design (SBDD) Bioorg.Med.Chem., 24, 2016
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5JGA
| Crystal structure of human TAK1/TAB1 fusion protein in complex with ligand 11c | 分子名称: | N-[5-(4-methylpiperazine-1-carbonyl)[1,1'-biphenyl]-2-yl]-4-oxo-3,4-dihydrothieno[3,2-d]pyrimidine-7-carboxamide, TAK1 kinase - TAB1 chimera fusion protein | 著者 | Irie, M, Nakamura, M, Fukami, T.A, Matsuura, T, Morishima, K. | 登録日 | 2016-04-19 | 公開日 | 2016-07-27 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2 Å) | 主引用文献 | Discovery of a potent and highly selective transforming growth factor beta receptor-associated kinase 1 (TAK1) inhibitor by structure based drug design (SBDD) Bioorg.Med.Chem., 24, 2016
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7FBW
| Acetylxylan esterase from Caldanaerobacter subterraneus subsp. tengcongensis | 分子名称: | NICKEL (II) ION, Predicted xylanase/chitin deacetylase | 著者 | Sasamoto, K, Himiyama, T, Moriyoshi, K, Ohmoto, T, Uegaki, K, Nishiya, Y, Nakamura, T. | 登録日 | 2021-07-13 | 公開日 | 2021-10-27 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | 主引用文献 | Crystal structure of acetylxylan esterase from Caldanaerobacter subterraneus subsp. tengcongensis. Acta Crystallogr.,Sect.F, 77, 2021
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