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7OR9
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BU of 7or9 by Molmil
Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-222 and COVOX-278 Fabs
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, COVOX-222 Fab heavy chain, ...
著者Zhou, D, Ren, J, Stuart, D.I.
登録日2021-06-04
公開日2021-07-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Reduced neutralization of SARS-CoV-2 B.1.617 by vaccine and convalescent serum.
Cell, 184, 2021
7ORA
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BU of 7ora by Molmil
Crystal structure of the T478K mutant receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-45 and COVOX-253 Fabs
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, COVOX-253 Fab heavy chain, ...
著者Zhou, D, Ren, J, Stuart, D.I.
登録日2021-06-04
公開日2021-07-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Reduced neutralization of SARS-CoV-2 B.1.617 by vaccine and convalescent serum.
Cell, 184, 2021
6WTJ
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BU of 6wtj by Molmil
Feline coronavirus drug inhibits the main protease of SARS-CoV-2 and blocks virus replication
分子名称: (1S,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, 3C-like proteinase
著者Khan, M.B, Arutyunova, E, Young, H.S, Lemieux, M.J.
登録日2020-05-02
公開日2020-05-20
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Feline coronavirus drug inhibits the main protease of SARS-CoV-2 and blocks virus replication.
Nat Commun, 11, 2020
4LHB
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BU of 4lhb by Molmil
Crystal structure of tungsten cofactor synthesizing protein MoaB from Pyrococcus furiosus
分子名称: Molybdopterin adenylyltransferase, SULFATE ION
著者Havarushka, N, Schwarz, G.
登録日2013-07-01
公開日2013-08-14
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Basis of Thermal Stability of the Tungsten Cofactor Synthesis Protein MoaB from Pyrococcus furiosus.
Plos One, 9, 2014
7LGK
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BU of 7lgk by Molmil
Crystal structure of soluble guanylate cyclase activator runcaciguat (BAY 1101042) bound to nostoc H-NOX domain
分子名称: CHLORIDE ION, GLYCEROL, H-NOX domain protein, ...
著者van den Akker, F, Kumar, V, Schaefer, M.
登録日2021-01-20
公開日2021-05-05
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Discovery of the Soluble Guanylate Cyclase Activator Runcaciguat (BAY 1101042).
J.Med.Chem., 64, 2021
6TGN
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BU of 6tgn by Molmil
Cryo-EM structure of AtNBR1-PB1 filament (L-type)
分子名称: Protein NBR1 homolog
著者Jakobi, A.J, Sachse, C.
登録日2019-11-17
公開日2020-02-12
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural basis of p62/SQSTM1 helical filaments and their role in cellular cargo uptake.
Nat Commun, 11, 2020
6TGP
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BU of 6tgp by Molmil
Cryo-EM structure of AtNBR1-PB1 filament (S-type)
分子名称: Protein NBR1 homolog
著者Jakobi, A.J, Sachse, C.
登録日2019-11-17
公開日2020-02-19
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Structural basis of p62/SQSTM1 helical filaments and their role in cellular cargo uptake.
Nat Commun, 11, 2020
6TGS
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BU of 6tgs by Molmil
AtNBR1-PB1 domain
分子名称: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Jakobi, A.J, Sachse, C.
登録日2019-11-17
公開日2020-02-12
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Structural basis of p62/SQSTM1 helical filaments and their role in cellular cargo uptake.
Nat Commun, 11, 2020
6TGY
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BU of 6tgy by Molmil
Cryo-EM structure of p62-PB1 filament (L-type)
分子名称: Sequestosome-1
著者Jakobi, A.J, Huber, S.T, Mortensen, S.A, Sachse, C.
登録日2019-11-18
公開日2020-02-12
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural basis of p62/SQSTM1 helical filaments and their role in cellular cargo uptake.
Nat Commun, 11, 2020
6TH3
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BU of 6th3 by Molmil
Cryo-EM structure of p62-PB1 filament (S-type)
分子名称: Sequestosome-1
著者Jakobi, A.J, Huber, S.T, Mortensen, S.A, Sachse, C.
登録日2019-11-18
公開日2020-02-12
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structural basis of p62/SQSTM1 helical filaments and their role in cellular cargo uptake.
Nat Commun, 11, 2020
7NEG
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BU of 7neg by Molmil
Crystal structure of the N501Y mutant receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-269 Fab
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody COVOX-269 Fab heavy chain, Antibody COVOX-269 Fab light chain, ...
著者Zhou, D, Ren, J, Stuart, D.
登録日2021-02-04
公開日2021-03-03
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Reduced neutralization of SARS-CoV-2 B.1.1.7 variant by convalescent and vaccine sera.
Cell, 184, 2021
7NEH
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BU of 7neh by Molmil
Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-269 Fab
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
著者Zhou, D, Ren, J, Stuart, D.
登録日2021-02-04
公開日2021-03-03
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Reduced neutralization of SARS-CoV-2 B.1.1.7 variant by convalescent and vaccine sera.
Cell, 184, 2021
5G5R
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BU of 5g5r by Molmil
CBS domain tandem of site-2 protease from Archaeoglobus fulgidus in complex with llama Nanobody - apo form
分子名称: NANOBODY, SITE-2 PROTEASE, SULFATE ION
著者Schacherl, M, Baumann, U.
登録日2016-06-02
公開日2017-05-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystallographic and biochemical characterization of the dimeric architecture of site-2 protease.
Biochim. Biophys. Acta, 1859, 2017
5G5X
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BU of 5g5x by Molmil
CBS domain tandem of site-2 protease from Archaeoglobus fulgidus in complex with llama Nanobody - nucleotide-bound form
分子名称: ADENOSINE MONOPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, NANOBODY, ...
著者Schacherl, M, Baumann, U.
登録日2016-06-09
公開日2017-05-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystallographic and biochemical characterization of the dimeric architecture of site-2 protease.
Biochim. Biophys. Acta, 1859, 2017
6G1Y
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BU of 6g1y by Molmil
Crystal structure of the photosensory core module (PCM) of a bathy phytochrome from Agrobacterium fabrum in the Pfr state.
分子名称: 3-[(2Z)-2-({3-(2-carboxyethyl)-5-[(E)-(4-ethenyl-3-methyl-5-oxo-1,5-dihydro-2H-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-2-yl}methylidene)-5-{(Z)-[(3E,4S)-3-ethylidene-4-methyl-5-oxopyrrolidin-2-ylidene]methyl}-4-methyl-2H-pyrrol-3-yl]propanoic acid, Bacteriophytochrome protein
著者Schmidt, A, Qureshi, B.M, Scheerer, P.
登録日2018-03-22
公開日2018-11-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural snapshot of a bacterial phytochrome in its functional intermediate state.
Nat Commun, 9, 2018
6G1Z
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BU of 6g1z by Molmil
Crystal structure of a fluorescence optimized bathy phytochrome PAiRFP2 derived from wild-type Agp2 in its Pfr state.
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 3-[(2Z)-2-({3-(2-carboxyethyl)-5-[(E)-(4-ethenyl-3-methyl-5-oxo-1,5-dihydro-2H-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-2-yl}methylidene)-5-{(Z)-[(3E,4S)-3-ethylidene-4-methyl-5-oxopyrrolidin-2-ylidene]methyl}-4-methyl-2H-pyrrol-3-yl]propanoic acid, ...
著者Sauthof, L, Schmidt, A, Szczepek, M, Scheerer, P.
登録日2018-03-22
公開日2018-11-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Structural snapshot of a bacterial phytochrome in its functional intermediate state.
Nat Commun, 9, 2018
6G20
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BU of 6g20 by Molmil
Crystal structure of a fluorescence optimized bathy phytochrome PAiRFP2 derived from wild-type Agp2 in its functional Meta-F intermediate state.
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 3-[(2Z)-2-({3-(2-carboxyethyl)-5-[(E)-(4-ethenyl-3-methyl-5-oxo-1,5-dihydro-2H-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-2-yl}methylidene)-5-{(Z)-[(3E,4S)-3-ethylidene-4-methyl-5-oxopyrrolidin-2-ylidene]methyl}-4-methyl-2H-pyrrol-3-yl]propanoic acid, ...
著者Schmidt, A, Sauthof, L, Szczepek, M, Scheerer, P.
登録日2018-03-22
公開日2018-11-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Structural snapshot of a bacterial phytochrome in its functional intermediate state.
Nat Commun, 9, 2018
7OEU
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BU of 7oeu by Molmil
Model of open pentamer of the Haliangium ochraceum encapsulin from symmetry expansion of icosahedral single particle reconstruction
分子名称: Haliangium ochraceum encapsulated ferritin, Linocin_M18 bacteriocin protein
著者Marles-Wright, J, Basle, A, Clarke, D.J, Ross, J.
登録日2021-05-04
公開日2022-02-09
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.64 Å)
主引用文献Pore dynamics and asymmetric cargo loading in an encapsulin nanocompartment.
Sci Adv, 8, 2022
7OE2
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BU of 7oe2 by Molmil
Model of closed pentamer of the Haliangium ochraceum encapsulin from symmetry expansion of icosahedral single particle reconstruction
分子名称: Haliangium ochraceum Encapsulated ferritin localisation sequence, Linocin_M18 bacteriocin protein
著者Marles-Wright, J, Basle, A, Clarke, D.J, Ross, J.
登録日2021-05-01
公開日2022-02-09
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Pore dynamics and asymmetric cargo loading in an encapsulin nanocompartment.
Sci Adv, 8, 2022
7ODW
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BU of 7odw by Molmil
Model of Haliangium ochraceum encapsulin from icosahedral single particle reconstruction
分子名称: Linocin_M18 bacteriocin protein
著者Marles-Wright, J, Basle, A, Clarke, D.J, Ross, J.
登録日2021-04-30
公開日2022-03-09
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Pore dynamics and asymmetric cargo loading in an encapsulin nanocompartment.
Sci Adv, 8, 2022
8CO5
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BU of 8co5 by Molmil
The surface-engineered photosensory module (PAS-GAF-PHY) of the bacterial phytochrome Agp1 (AtBphP1) in the Pr form with parallel dimer formation
分子名称: 3-[5-[(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-2-[[5-[(3-ethyl-4-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid, Bacteriophytochrome protein, MAGNESIUM ION
著者Schmidt, A, Sauthof, L, Krauss, N, Scheerer, P.
登録日2023-02-27
公開日2024-03-06
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Crystal structures of a bacterial phytochrome exhibiting a group-subgroup relationship reveal pronounced flexibility of the photosensory core module in the Pr state
To Be Published
8ASY
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BU of 8asy by Molmil
SARS-CoV-2 Omicron BA.2.75 RBD in complex with ACE2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, GLYCEROL, ...
著者Zhou, D, Huo, J, Ren, J, Stuart, D.I.
登録日2022-08-22
公開日2023-01-11
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献A delicate balance between antibody evasion and ACE2 affinity for Omicron BA.2.75.
Cell Rep, 42, 2022
8DKZ
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BU of 8dkz by Molmil
Polymorphism in SARS-CoV-2 Nsp5 main protease reveals differences in cleavage of viral and host substrates
分子名称: 3C-like proteinase nsp5
著者Khan, M.B, Lu, J, Young, H.S, Lemieux, M.J.
登録日2022-07-06
公開日2023-04-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献SARS-CoV-2 M pro Protease Variants of Concern Display Altered Viral Substrate and Cell Host Target Galectin-8 Processing but Retain Sensitivity toward Antivirals.
Acs Cent.Sci., 9, 2023
8DJJ
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BU of 8djj by Molmil
Polymorphism in SARS-CoV-2 Nsp5 main protease reveals differences in cleavage of viral and host substrates
分子名称: 3C-like proteinase nsp5
著者Khan, M.B, Lu, J, Young, H.S, Lemieux, M.J.
登録日2022-06-30
公開日2023-04-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.51 Å)
主引用文献SARS-CoV-2 M pro Protease Variants of Concern Display Altered Viral Substrate and Cell Host Target Galectin-8 Processing but Retain Sensitivity toward Antivirals.
Acs Cent.Sci., 9, 2023
8DI3
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BU of 8di3 by Molmil
Polymorphism in SARS-CoV-2 Nsp5 main protease reveals differences in cleavage of viral and host substrates
分子名称: 3C-like proteinase nsp5
著者Lu, J, Khan, M.B, Young, H.S, Lemieux, M.J.
登録日2022-06-28
公開日2023-05-03
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献SARS-CoV-2 M pro Protease Variants of Concern Display Altered Viral Substrate and Cell Host Target Galectin-8 Processing but Retain Sensitivity toward Antivirals.
Acs Cent.Sci., 9, 2023

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