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6LUK
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Crystal structure of the SAMD1 SAM domain in another crystal form
分子名称: Atherin, SULFATE ION
著者Cao, Y, Zhou, Y, Wang, Z.
登録日2020-01-29
公開日2021-02-03
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.054 Å)
主引用文献The SAM domain-containing protein 1 (SAMD1) acts as a repressive chromatin regulator at unmethylated CpG islands.
Sci Adv, 7, 2021
6LUI
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Crystal structure of the SAMD1 WH domain and DNA complex
分子名称: Atherin, DNA (5'-D(*AP*CP*CP*TP*GP*CP*GP*CP*AP*CP*CP*AP*T)-3'), DNA (5'-D(*AP*TP*GP*GP*TP*GP*CP*GP*CP*AP*GP*GP*T)-3')
著者Zhou, Y, Cao, Y, Wang, Z.
登録日2020-01-29
公開日2021-02-03
最終更新日2021-07-07
実験手法X-RAY DIFFRACTION (1.781 Å)
主引用文献The SAM domain-containing protein 1 (SAMD1) acts as a repressive chromatin regulator at unmethylated CpG islands.
Sci Adv, 7, 2021
6LUJ
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BU of 6luj by Molmil
Crystal structure of the SAMD1 SAM domain
分子名称: Atherin, SULFATE ION
著者Cao, Y, Zhou, Y, Wang, Z.
登録日2020-01-29
公開日2021-02-03
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献The SAM domain-containing protein 1 (SAMD1) acts as a repressive chromatin regulator at unmethylated CpG islands.
Sci Adv, 7, 2021
4L07
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BU of 4l07 by Molmil
Crystal structure of the maleamate amidase Ami from Pseudomonas putida S16
分子名称: GLYCEROL, Hydrolase, isochorismatase family, ...
著者Chen, D.D, Lu, Y, Zhang, Z, Wu, G, Xu, P.
登録日2013-05-30
公開日2014-07-16
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural insights into the specific recognition of N-heterocycle biodenitrogenation-derived substrates by microbial amide hydrolases.
Mol.Microbiol., 91, 2014
4L08
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BU of 4l08 by Molmil
Crystal structure of the maleamate amidase Ami(C149A) in complex with maleate from Pseudomonas putida S16
分子名称: Hydrolase, isochorismatase family, MALEIC ACID
著者Chen, D.D, Lu, Y, Zhang, Z, Wu, G, Xu, P.
登録日2013-05-31
公開日2014-07-16
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献Structural insights into the specific recognition of N-heterocycle biodenitrogenation-derived substrates by microbial amide hydrolases.
Mol.Microbiol., 91, 2014
4K7F
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BU of 4k7f by Molmil
Newly identified epitope V60 from HBV core protein complexed with HLA-A*0201
分子名称: Beta-2-microglobulin, Core protein, HLA class I histocompatibility antigen, ...
著者Meng, S.D, Zhang, Y, Wu, Y, Qi, J.X.
登録日2013-04-17
公開日2013-06-05
最終更新日2022-08-24
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The L60V variation in hepatitis B virus core protein elicits new epitope-specific cytotoxic T lymphocytes and enhances viral replication.
J.Virol., 87, 2013
8J8Q
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BU of 8j8q by Molmil
Structure of the four-component Paf1 complex from Saccharomyces eubayanus
分子名称: CDC73-like protein, CTR9-like protein, PAF1-like protein, ...
著者Wang, Z, Qin, Y, Zhou, Y, Cao, Y.
登録日2023-05-02
公開日2023-05-24
最終更新日2023-06-14
実験手法X-RAY DIFFRACTION (3.11 Å)
主引用文献Structural Basis of the Transcriptional Elongation Factor Paf1 Core Complex from Saccharomyces eubayanus .
Int J Mol Sci, 24, 2023
8J8P
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Structure of the four-component Paf1 complex from Saccharomyces eubayanus
分子名称: CDC73-like protein, CTR9-like protein, PAF1-like protein, ...
著者Wang, Z, Qin, Y, Zhou, Y, Cao, Y.
登録日2023-05-02
公開日2023-05-24
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural Basis of the Transcriptional Elongation Factor Paf1 Core Complex from Saccharomyces eubayanus .
Int J Mol Sci, 24, 2023
8JJO
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Cryo-EM structure of the beta2AR-mBRIL/1b3 Fab/Glue complex with an antagonist
分子名称: (2S)-1-[(1-methylethyl)amino]-3-(2-prop-2-en-1-ylphenoxy)propan-2-ol, Beta-2 adrenergic receptor,Beta-2 adrenergic receptor,Soluble cytochrome b562
著者He, B.B, Zhong, Y.X, Guo, Q, Tao, Y.Y.
登録日2023-05-31
公開日2023-09-06
最終更新日2024-01-03
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献A method for structure determination of GPCRs in various states.
Nat.Chem.Biol., 20, 2024
8J7E
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BU of 8j7e by Molmil
Crystal structure of BRIL in complex with 1b3 Fab
分子名称: Antibody 1b3 Fab Heavy chain, Antibody 1b3 Fab Light chain, Soluble cytochrome b562
著者Zhong, Y.X, Guo, Q, Tao, Y.Y.
登録日2023-04-27
公開日2023-09-06
最終更新日2024-01-03
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献A method for structure determination of GPCRs in various states.
Nat.Chem.Biol., 20, 2024
8JJL
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BU of 8jjl by Molmil
cryo-EM structure of the beta2-AR-mBRIL/1b3 Fab/Glue complex with a full agonist
分子名称: Beta-2 adrenergic receptor,Soluble cytochrome b562, Olodaterol
著者He, B.B, Zhong, Y.X, Guo, Q, Tao, Y.Y.
登録日2023-05-30
公開日2023-09-06
最終更新日2024-01-03
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献A method for structure determination of GPCRs in various states.
Nat.Chem.Biol., 20, 2024
8JJ8
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Cryo-EM structure of the beta2AR-mBRIL/1b3 Fab/Glue complex with a partial agonist
分子名称: Beta-2 adrenergic receptor,Soluble cytochrome b562, ~{N}-[5-[(1~{R})-2-[[(2~{R})-1-(4-methoxyphenyl)propan-2-yl]amino]-1-oxidanyl-ethyl]-2-oxidanyl-phenyl]methanamide
著者He, B.B, Zhong, Y.X, Guo, Q, Tao, Y.Y.
登録日2023-05-29
公開日2023-09-06
最終更新日2024-01-03
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献A method for structure determination of GPCRs in various states.
Nat.Chem.Biol., 20, 2024
8JMT
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BU of 8jmt by Molmil
Structure of the adhesion GPCR ADGRL3 in the apo state
分子名称: Adhesion G protein-coupled receptor L3,Soluble cytochrome b562
著者Tao, Y, Guo, Q, He, B, Zhong, Y.
登録日2023-06-05
公開日2023-09-06
最終更新日2024-01-03
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献A method for structure determination of GPCRs in various states.
Nat.Chem.Biol., 20, 2024
8IP5
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BU of 8ip5 by Molmil
Cryo-EM structure of hMRS2-lowEDTA
分子名称: CHLORIDE ION, MAGNESIUM ION, Magnesium transporter MRS2 homolog, ...
著者Li, M, Li, Y, Yang, X, Shen, Y.Q.
登録日2023-03-14
公開日2023-06-14
最終更新日2023-08-30
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Molecular basis of Mg 2+ permeation through the human mitochondrial Mrs2 channel.
Nat Commun, 14, 2023
8IP3
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BU of 8ip3 by Molmil
Cryo-EM structure of hMRS2-Mg
分子名称: CHLORIDE ION, MAGNESIUM ION, Magnesium transporter MRS2 homolog, ...
著者Li, M, Li, Y, Yang, X, Shen, Y.Q.
登録日2023-03-14
公開日2023-06-14
最終更新日2023-08-30
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Molecular basis of Mg 2+ permeation through the human mitochondrial Mrs2 channel.
Nat Commun, 14, 2023
8IP6
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BU of 8ip6 by Molmil
Cryo-EM structure of hMRS2-rest
分子名称: CHLORIDE ION, Magnesium transporter MRS2 homolog, mitochondrial
著者Li, M, Li, Y, Yang, X, Shen, Y.Q.
登録日2023-03-14
公開日2023-06-14
最終更新日2023-08-30
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Molecular basis of Mg 2+ permeation through the human mitochondrial Mrs2 channel.
Nat Commun, 14, 2023
8IP4
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BU of 8ip4 by Molmil
Cryo-EM structure of hMRS-highEDTA
分子名称: CHLORIDE ION, MAGNESIUM ION, Magnesium transporter MRS2 homolog, ...
著者Li, M, Li, Y, Yang, X, Shen, Y.Q.
登録日2023-03-14
公開日2023-06-14
最終更新日2023-08-30
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Molecular basis of Mg 2+ permeation through the human mitochondrial Mrs2 channel.
Nat Commun, 14, 2023
8JBA
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BU of 8jba by Molmil
Discovery and Crystallography Study of Novel Oxadiazole Analogs as Small Molecule PD-1/PD-L1 inhibitors
分子名称: (2~{S})-2-[[3-[[5-[(2-methyl-3-phenyl-phenoxy)methyl]-1,3,4-oxadiazol-2-yl]sulfanylmethyl]phenyl]methylamino]-3-oxidanyl-propanoic acid, Programmed cell death 1 ligand 1
著者Cheng, Y, Xiao, Y.B.
登録日2023-05-08
公開日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Discovery and Crystallography Study of Novel Biphenyl Ether and Oxadiazole Thioether (Non-Arylmethylamine)-Based Small-Molecule PD-1/PD-L1 Inhibitors as Immunotherapeutic Agents.
J.Med.Chem., 66, 2023
8H7A
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BU of 8h7a by Molmil
Crystal structure of the dimer form KAT6A WH domain with its bound double stranded DNA
分子名称: DNA (5'-D(*GP*GP*TP*CP*CP*GP*AP*CP*GP*GP*AP*CP*C)-3'), DNA (5'-D(*GP*GP*TP*CP*CP*GP*TP*CP*GP*GP*AP*CP*C)-3'), Histone acetyltransferase KAT6A, ...
著者Wang, Z, Cao, Y.
登録日2022-10-19
公開日2023-01-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献The histone acetyltransferase KAT6A is recruited to unmethylated CpG islands via a DNA binding winged helix domain.
Nucleic Acids Res., 51, 2023
8K0D
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BU of 8k0d by Molmil
Cryo-EM structure of conformation 2 of complex of Nipah virus attachment G with 1E5 neutralizing antibody
分子名称: Glycoprotein G, The heavy chain of 1E5, The light chain of 1E5
著者Sun, M.
登録日2023-07-08
公開日2024-05-01
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.94 Å)
主引用文献A potent Henipavirus cross-neutralizing antibody reveals a dynamic fusion-triggering pattern of the G-tetramer.
Nat Commun, 15, 2024
8K0C
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BU of 8k0c by Molmil
Cryo-EM structure of conformation 1 of complex of Nipah virus attachment glycoprotein G with 1E5 neutralizing antibody
分子名称: Glycoprotein G, Heavy chain of 1E5 Fab fragments, Light chain of 1E5 Fab fragments
著者Sun, M.M.
登録日2023-07-08
公開日2024-05-01
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.18 Å)
主引用文献A potent Henipavirus cross-neutralizing antibody reveals a dynamic fusion-triggering pattern of the G-tetramer.
Nat Commun, 15, 2024
7X2K
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BU of 7x2k by Molmil
Crystal structure of nanobody Nb70 with antibody 1F11 fab and SARS-CoV-2 RBD
分子名称: 1F11-H, 1F11-L, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Wang, X.Q, Zhang, L.Q, Ren, Y.F, Li, M.X.
登録日2022-02-25
公開日2022-12-21
最終更新日2023-06-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Broadly neutralizing and protective nanobodies against SARS-CoV-2 Omicron subvariants BA.1, BA.2, and BA.4/5 and diverse sarbecoviruses.
Nat Commun, 13, 2022
7X2J
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Crystal structure of nanobody Nb70 with SARS-CoV RBD
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Nb70, Spike protein S1
著者Wang, X.Q, Zhang, L.Q, Ren, Y.F, Li, M.X.
登録日2022-02-25
公開日2022-12-21
最終更新日2023-06-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Broadly neutralizing and protective nanobodies against SARS-CoV-2 Omicron subvariants BA.1, BA.2, and BA.4/5 and diverse sarbecoviruses.
Nat Commun, 13, 2022
7X2M
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BU of 7x2m by Molmil
Crystal structure of nanobody 1-2C7 with SARS-CoV-2 RBD
分子名称: 1-2C7, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-D-mannopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1
著者Wang, X.Q, Zhang, L.Q, Ren, Y.F, Li, M.X.
登録日2022-02-25
公開日2022-12-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Broadly neutralizing and protective nanobodies against SARS-CoV-2 Omicron subvariants BA.1, BA.2, and BA.4/5 and diverse sarbecoviruses.
Nat Commun, 13, 2022
3IKI
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5-SMe-dU containing DNA octamer
分子名称: 5'-D(*GP*(UMS)P*GP*(US2)P*AP*CP*AP*C)-3', MAGNESIUM ION
著者Sheng, J, Hassan, A.E.A, Zhang, W, Gan, J, Huang, Z.
登録日2009-08-05
公開日2010-03-09
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Hydrogen bond formation between the naturally modified nucleobase and phosphate backbone.
Nucleic Acids Res., 40, 2012

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