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8FXR
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BU of 8fxr by Molmil
Structure of neck with portal vertex of capsid of Agrobacterium phage Milano
分子名称: Collar sheath protein, gp13, Linking protein 1, ...
著者Sonani, R.R, Wang, F, Esteves, N.C, Kelly, R.J, Sebastian, A, Kreutzberger, M.A.B, Leiman, P.G, Scharf, B.E, Egelman, E.H.
登録日2023-01-25
公開日2023-12-06
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Neck and capsid architecture of the robust Agrobacterium phage Milano.
Commun Biol, 6, 2023
8FWG
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BU of 8fwg by Molmil
Structure of neck and portal vertex of Agrobacterium phage Milano, C5 symmetry
分子名称: Collar sheath protein, gp13, Linking protein 1, ...
著者Sonani, R.R, Wang, F, Esteves, N.C, Kelly, R.J, Sebastian, A, Kreutzberger, M.A.B, Leiman, P.G, Scharf, B.E, Egelman, E.H.
登録日2023-01-22
公開日2023-12-06
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献Neck and capsid architecture of the robust Agrobacterium phage Milano.
Commun Biol, 6, 2023
8FWM
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BU of 8fwm by Molmil
Structure of tail-neck junction of Agrobacterium phage Milano
分子名称: Collar sheath protein, gp13, Tail sheath protein, ...
著者Sonani, R.R, Wang, F, Esteves, N.C, Kelly, R.J, Sebastian, A, Kreutzberger, M.A.B, Leiman, P.G, Scharf, B.E, Egelman, E.H.
登録日2023-01-23
公開日2023-12-06
実験手法ELECTRON MICROSCOPY (3.49 Å)
主引用文献Neck and capsid architecture of the robust Agrobacterium phage Milano.
Commun Biol, 6, 2023
8FWC
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BU of 8fwc by Molmil
Collar sheath structure of Agrobacterium phage Milano
分子名称: Collar sheath protein, gp13
著者Sonani, R.R, Wang, F, Esteves, N.C, Kelly, R.J, Sebastian, A, Kreutzberger, M.A.B, Leiman, P.G, Scharf, B.E, Egelman, E.H.
登録日2023-01-20
公開日2023-12-06
実験手法ELECTRON MICROSCOPY (2.96 Å)
主引用文献Neck and capsid architecture of the robust Agrobacterium phage Milano.
Commun Biol, 6, 2023
8FWE
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BU of 8fwe by Molmil
Neck structure of Agrobacterium phage Milano, C3 symmetry
分子名称: Collar sheath protein, gp13, Neck 1 protein, ...
著者Sonani, R.R, Wang, F, Esteves, N.C, Kelly, R.J, Sebastian, A, Kreutzberger, M.A.B, Leiman, P.G, Scharf, B.E, Egelman, E.H.
登録日2023-01-21
公開日2023-12-06
実験手法ELECTRON MICROSCOPY (3.46 Å)
主引用文献Neck and capsid architecture of the robust Agrobacterium phage Milano.
Commun Biol, 6, 2023
6U5J
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BU of 6u5j by Molmil
CryoEM Structure of Pyocin R2 - postcontracted - collar
分子名称: Collar PA0615, Sheath PA0622
著者Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
登録日2019-08-27
公開日2020-04-15
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
8FQC
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BU of 8fqc by Molmil
Structure of baseplate with receptor binding complex of Agrobacterium phage Milano
分子名称: Baseplate Centerpiece, gp25, Baseplate Central Spike, ...
著者Sonani, R.R, Leiman, P.G, Wang, F, Kreutzberger, M.A.B, Sebastian, A, Esteves, N.C, Kelly, R.J, Scharf, B, Egelman, E.H.
登録日2023-01-05
公開日2024-01-31
最終更新日2024-02-07
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献An extensive disulfide bond network prevents tail contraction in Agrobacterium tumefaciens phage Milano.
Nat Commun, 15, 2024
8FOU
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BU of 8fou by Molmil
Structure of Agrobacterium tumefaciens bacteriophage Milano contracted tail-tube
分子名称: Virion-associated protein
著者Sonani, R.R, Leiman, P.G, Wang, F, Kreutzberger, M.A.B, Sebastian, A, Esteves, N.C, Kelly, R.J, Scharf, B, Egelman, E.H.
登録日2023-01-03
公開日2024-01-17
最終更新日2024-02-07
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献An extensive disulfide bond network prevents tail contraction in Agrobacterium tumefaciens phage Milano.
Nat Commun, 15, 2024
8FOY
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BU of 8foy by Molmil
Structure of Agrobacterium tumefaciens bacteriophage Milano contracted tail-sheath
分子名称: Tail sheath protein
著者Sonani, R.R, Leiman, P.G, Wang, F, Kreutzberger, M.A.B, Sebastian, A, Esteves, N.C, Kelly, R.J, Scharf, B, Egelman, E.H.
登録日2023-01-03
公開日2024-01-17
最終更新日2024-02-07
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献An extensive disulfide bond network prevents tail contraction in Agrobacterium tumefaciens phage Milano.
Nat Commun, 15, 2024
8FOP
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BU of 8fop by Molmil
Structure of Agrobacterium tumefaciens bacteriophage Milano curved tail
分子名称: Tail sheath protein, Virion-associated protein
著者Sonani, R.R, Leiman, P.G, Wang, F, Kreutzberger, M.A.B, Sebastian, A, Esteves, N.C, Kelly, R.J, Scharf, B, Egelman, E.H.
登録日2023-01-03
公開日2024-01-17
最終更新日2024-02-07
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献An extensive disulfide bond network prevents tail contraction in Agrobacterium tumefaciens phage Milano.
Nat Commun, 15, 2024
6U5B
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BU of 6u5b by Molmil
CryoEM Structure of Pyocin R2 - precontracted - baseplate
分子名称: Glue PA0627, Ripcord PA0626, Sheath Initiator PA0617, ...
著者Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
登録日2019-08-27
公開日2020-04-15
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
4GBF
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BU of 4gbf by Molmil
Crystal structure of the C-terminal domain of gp131 from bacteriophage phiKZ
分子名称: CHLORIDE ION, MAGNESIUM ION, PHIKZ131
著者Sycheva, L.V, Shneider, M.M, Leiman, P.G.
登録日2012-07-27
公開日2012-10-17
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.949 Å)
主引用文献Crystal structure and location of gp131 in the bacteriophage phiKZ virion.
Virology, 434, 2012
4HIZ
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BU of 4hiz by Molmil
Phage phi92 endosialidase
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
著者Schwarzer, D, Browning, C, Leiman, P.G.
登録日2012-10-12
公開日2014-01-15
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.601 Å)
主引用文献Crystal Structure of Endosialidase from Phage phi92 that cleaves alpha2,8- and alpha2,9-linked polysialic acid
To be Published
4GLY
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BU of 4gly by Molmil
Human urokinase-type plasminogen activator uPA in complex with the two-disulfide bridge peptide UK504
分子名称: BICYCLIC PEPTIDE INHIBITOR UK504, CHLORIDE ION, GLYCEROL, ...
著者Buth, S.A, Leiman, P.G, Chen, S, Heinis, C.
登録日2012-08-15
公開日2013-05-15
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.518 Å)
主引用文献Bicyclic Peptide Ligands Pulled out of Cysteine-Rich Peptide Libraries.
J.Am.Chem.Soc., 135, 2013
4JJ2
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BU of 4jj2 by Molmil
High resolution structure of a C-terminal fragment of the T4 phage gp5 beta-helix
分子名称: 9-OCTADECENOIC ACID, MAGNESIUM ION, PALMITIC ACID, ...
著者Buth, S.A, Leiman, P.G, Boudko, S.P.
登録日2013-03-07
公開日2014-03-12
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Structure and Biophysical Properties of a Triple-Stranded Beta-Helix Comprising the Central Spike of Bacteriophage T4.
Viruses, 7, 2015
4JIV
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BU of 4jiv by Molmil
VCA0105 PAAR-repeat protein from Vibrio cholerae in complex with a VgrG-like beta-helix that is based on a fragment of T4 gp5
分子名称: 9-OCTADECENOIC ACID, MAGNESIUM ION, PALMITIC ACID, ...
著者Buth, S.A, Leiman, P.G, Shneider, M.M.
登録日2013-03-07
公開日2013-08-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.903 Å)
主引用文献PAAR-repeat proteins sharpen and diversify the type VI secretion system spike.
Nature, 500, 2013
4JIW
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BU of 4jiw by Molmil
c1882 PAAR-repeat protein from Escherichia coli in complex with a VgrG-like beta-helix that is based on a fragment of T4 gp5
分子名称: CHLORIDE ION, MAGNESIUM ION, Putative uncharacterized protein, ...
著者Buth, S.A, Leiman, P.G, Shneider, M.M.
登録日2013-03-07
公開日2013-08-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.402 Å)
主引用文献PAAR-repeat proteins sharpen and diversify the type VI secretion system spike.
Nature, 500, 2013
4JK5
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BU of 4jk5 by Molmil
Human urokinase-type Plasminogen Activator (uPA) in complex with a bicyclic peptide inhibitor (UK18-D-Ser)
分子名称: 1,3,5-tris(bromomethyl)benzene, CHLORIDE ION, HEXAETHYLENE GLYCOL, ...
著者Buth, S.A, Leiman, P.G, Chen, S, Heinis, C.
登録日2013-03-09
公開日2013-07-17
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Improving binding affinity and stability of Peptide ligands by substituting glycines with d-amino acids.
Chembiochem, 14, 2013
4JK6
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BU of 4jk6 by Molmil
Human urokinase-type Plasminogen Activator (uPA) in complex with a bicyclic peptide inhibitor (UK18-D-Aba)
分子名称: 1,3,5-tris(bromomethyl)benzene, CHLORIDE ION, HEXAETHYLENE GLYCOL, ...
著者Buth, S.A, Leiman, P.G, Chen, S, Heinis, C.
登録日2013-03-09
公開日2013-07-17
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Improving binding affinity and stability of Peptide ligands by substituting glycines with d-amino acids.
Chembiochem, 14, 2013
1K28
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BU of 1k28 by Molmil
The Structure of the Bacteriophage T4 Cell-Puncturing Device
分子名称: BASEPLATE STRUCTURAL PROTEIN GP27, PHOSPHATE ION, POTASSIUM ION, ...
著者Kanamaru, S, Leiman, P.G, Kostyuchenko, V.A, Chipman, P.R, Mesyanzhinov, V.V, Arisaka, F, Rossmann, M.G.
登録日2001-09-26
公開日2002-02-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of the cell-puncturing device of bacteriophage T4.
Nature, 415, 2002
1PDI
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BU of 1pdi by Molmil
Fitting of the C-terminal part of the short tail fibers into the cryo-EM reconstruction of T4 baseplate
分子名称: Short tail fiber protein
著者Kostyuchenko, V.A, Leiman, P.G, Chipman, P.R, Kanamaru, S, van Raaij, M.J, Arisaka, F, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2003-05-19
公開日2003-09-09
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献Three-dimensional structure of bacteriophage T4 baseplate
Nat.Struct.Biol., 10, 2003
1PDP
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BU of 1pdp by Molmil
Fitting of gp9 structure into the bacteriophage T4 baseplate cryoEM reconstruction
分子名称: Baseplate structural protein Gp9
著者Kostyuchenko, V.A, Leiman, P.G, Chipman, P.R, Kanamaru, S, van Raaij, M.J, Arisaka, F, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2003-05-19
公開日2003-09-09
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献Three-dimensional structure of the bacteriophage T4 baseplate
Nat.Struct.Biol., 10, 2003
4OSD
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BU of 4osd by Molmil
Dimer of a C-terminal fragment of phage T4 gp5 beta-helix
分子名称: 9-OCTADECENOIC ACID, MAGNESIUM ION, PALMITIC ACID, ...
著者Buth, S.A, Leiman, P.G, Shneider, M.M.
登録日2014-02-12
公開日2015-02-18
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structure and Biophysical Properties of a Triple-Stranded Beta-Helix Comprising the Central Spike of Bacteriophage T4.
Viruses, 7, 2015
4QNL
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BU of 4qnl by Molmil
Crystal structure of tail fiber protein gp63.1 from E. coli phage G7C
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Riccio, C, Browning, C, Prokhorov, N, Letarov, A, Leiman, P.G.
登録日2014-06-18
公開日2015-06-24
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.411 Å)
主引用文献Function of bacteriophage G7C esterase tailspike in host cell adsorption.
Mol. Microbiol., 105, 2017
3FO8
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BU of 3fo8 by Molmil
Crystal structure of the bacteriophage T4 tail sheath protein, protease resistant fragment gp18PR
分子名称: ACETATE ION, Tail sheath protein Gp18
著者Aksyuk, A.A, Leiman, P.G, Kurochkina, L.P, Shneider, M.M, Kostyuchenko, V.A, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2008-12-29
公開日2009-03-10
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The tail sheath structure of bacteriophage T4: a molecular machine for infecting bacteria.
Embo J., 28, 2009

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