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4RU4
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BU of 4ru4 by Molmil
Crystal structure of the tailspike protein gp49 from Pseudomonas phage LKA1
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, SODIUM ION, ...
著者Browning, C, Shneider, M.M, Leiman, P.G.
登録日2014-11-18
公開日2015-11-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.903 Å)
主引用文献The O-specific polysaccharide lyase from the phage LKA1 tailspike reduces Pseudomonas virulence.
Sci Rep, 7, 2017
4RU5
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BU of 4ru5 by Molmil
Crystal Structure of the Pseudomonas phage phi297 tailspike gp61
分子名称: 1,2-ETHANEDIOL, ACETATE ION, CALCIUM ION, ...
著者Browning, C, Sycheva, L.V, Shneider, M.M, Leiman, P.G.
登録日2014-11-18
公開日2015-11-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献The O-specific polysaccharide lyase from the phage LKA1 tailspike reduces Pseudomonas virulence.
Sci Rep, 7, 2017
1PDM
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BU of 1pdm by Molmil
Fitting of gp8 structure into the cryoEM reconstruction of the bacteriophage T4 baseplate
分子名称: Baseplate structural protein Gp8
著者Kostyuchenko, V.A, Leiman, P.G, Chipman, P.R, Kanamaru, S, van Raaij, M.J, Arisaka, F, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2003-05-19
公開日2003-09-09
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献Three-dimensional structure of the bacteriophage T4 baseplate
Nat.Struct.Biol., 10, 2003
1PDF
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BU of 1pdf by Molmil
Fitting of gp11 crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 baseplate-tail tube complex
分子名称: Baseplate structural protein Gp11
著者Kostyuchenko, V.A, Leiman, P.G, Chipman, P.R, Kanamaru, S, van Raaij, M.J, Arisaka, F, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2003-05-19
公開日2003-09-09
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献Three-dimensional structure of bacteriophage T4 baseplate
Nat.Struct.Biol., 10, 2003
1PDL
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BU of 1pdl by Molmil
Fitting of gp5 in the cryoEM reconstruction of the bacteriophage T4 baseplate
分子名称: Tail-associated lysozyme
著者Kostyuchenko, V.A, Leiman, P.G, Chipman, P.R, Kanamaru, S, van Raaij, M.J, Arisaka, F, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2003-05-19
公開日2003-09-09
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献Three-dimensional structure of the bacteriophage T4 baseplate
Nat.Struct.Biol., 10, 2003
1PDJ
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BU of 1pdj by Molmil
Fitting of gp27 into cryoEM reconstruction of bacteriophage T4 baseplate
分子名称: Baseplate structural protein Gp27
著者Kostyuchenko, V.A, Leiman, P.G, Chipman, P.R, Kanamaru, S, van Raaij, M.J, Arisaka, F, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2003-05-19
公開日2003-09-09
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献Three-dimensional structure of the bacteriophage T4 baseplate
Nat.Struct.Biol., 10, 2003
3QR8
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BU of 3qr8 by Molmil
Crystal structure of the bacteriophage P2 membrane-piercing protein gpV
分子名称: Baseplate assembly protein V, CHLORIDE ION, GLYCEROL
著者Browning, C, Shneider, M, Leiman, P.G.
登録日2011-02-17
公開日2012-02-22
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Phage pierces the host cell membrane with the iron-loaded spike.
Structure, 20, 2012
3PQI
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BU of 3pqi by Molmil
Crystal structure of the bacteriophage phi92 membrane-piercing protein gp138
分子名称: FE (III) ION, POTASSIUM ION, gene product 138
著者Browning, C, Shneider, M, Leiman, P.G.
登録日2010-11-26
公開日2012-02-22
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.642 Å)
主引用文献Phage pierces the host cell membrane with the iron-loaded spike.
Structure, 20, 2012
6U5B
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BU of 6u5b by Molmil
CryoEM Structure of Pyocin R2 - precontracted - baseplate
分子名称: Glue PA0627, Ripcord PA0626, Sheath Initiator PA0617, ...
著者Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
登録日2019-08-27
公開日2020-04-15
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
6U5H
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BU of 6u5h by Molmil
CryoEM Structure of Pyocin R2 - precontracted - hub
分子名称: Probable bacteriophage protein Pyocin R2
著者Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
登録日2019-08-27
公開日2020-04-15
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
3PQH
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BU of 3pqh by Molmil
Crystal structure of the C-terminal fragment of the bacteriophage phi92 membrane-piercing protein gp138
分子名称: FE (III) ION, SODIUM ION, gene product 138
著者Browning, C, Shneider, M, Leiman, P.G.
登録日2010-11-26
公開日2012-02-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.295 Å)
主引用文献Phage pierces the host cell membrane with the iron-loaded spike.
Structure, 20, 2012
6U5K
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BU of 6u5k by Molmil
CryoEM Structure of Pyocin R2 - postcontracted - baseplate
分子名称: Glue PA0627, Sheath Initiator PA0617, Sheath PA0622, ...
著者Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
登録日2019-08-27
公開日2020-04-15
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
6U5F
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BU of 6u5f by Molmil
CryoEM Structure of Pyocin R2 - precontracted - collar
分子名称: Collar PA0615, Sheath PA0622, Tube PA0623
著者Ge, P, Avaylon, J, Scholl, D, Shneider, M.M, Browning, C, Buth, S.A, Plattner, M, Ding, K, Leiman, P.G, Miller, J.F, Zhou, Z.H.
登録日2019-08-27
公開日2020-04-15
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Action of a minimal contractile bactericidal nanomachine.
Nature, 580, 2020
3QR7
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BU of 3qr7 by Molmil
Crystal structure of the C-terminal fragment of the bacteriophage P2 membrane-piercing protein gpV
分子名称: Baseplate assembly protein V, CALCIUM ION, CHLORIDE ION, ...
著者Browning, C, Shneider, M, Leiman, P.G.
登録日2011-02-17
公開日2012-02-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (0.94 Å)
主引用文献Phage pierces the host cell membrane with the iron-loaded spike.
Structure, 20, 2012
4JJ2
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BU of 4jj2 by Molmil
High resolution structure of a C-terminal fragment of the T4 phage gp5 beta-helix
分子名称: 9-OCTADECENOIC ACID, MAGNESIUM ION, PALMITIC ACID, ...
著者Buth, S.A, Leiman, P.G, Boudko, S.P.
登録日2013-03-07
公開日2014-03-12
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Structure and Biophysical Properties of a Triple-Stranded Beta-Helix Comprising the Central Spike of Bacteriophage T4.
Viruses, 7, 2015
4JIV
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BU of 4jiv by Molmil
VCA0105 PAAR-repeat protein from Vibrio cholerae in complex with a VgrG-like beta-helix that is based on a fragment of T4 gp5
分子名称: 9-OCTADECENOIC ACID, MAGNESIUM ION, PALMITIC ACID, ...
著者Buth, S.A, Leiman, P.G, Shneider, M.M.
登録日2013-03-07
公開日2013-08-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.903 Å)
主引用文献PAAR-repeat proteins sharpen and diversify the type VI secretion system spike.
Nature, 500, 2013
4JK6
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BU of 4jk6 by Molmil
Human urokinase-type Plasminogen Activator (uPA) in complex with a bicyclic peptide inhibitor (UK18-D-Aba)
分子名称: 1,3,5-tris(bromomethyl)benzene, CHLORIDE ION, HEXAETHYLENE GLYCOL, ...
著者Buth, S.A, Leiman, P.G, Chen, S, Heinis, C.
登録日2013-03-09
公開日2013-07-17
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Improving binding affinity and stability of Peptide ligands by substituting glycines with d-amino acids.
Chembiochem, 14, 2013
4KU0
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BU of 4ku0 by Molmil
Enterobacteria phage T4 gp5.4 PAAR repeat protein in complex with T4 gp5 beta-helix fragment
分子名称: 1,2-ETHANEDIOL, 9-OCTADECENOIC ACID, FE (III) ION, ...
著者Buth, S.A, Leiman, P.G, Shneider, M.M.
登録日2013-05-21
公開日2014-05-21
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.15 Å)
主引用文献Crystall structute of the business end of the T4 cell-puncturing device
To be Published
4JIW
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BU of 4jiw by Molmil
c1882 PAAR-repeat protein from Escherichia coli in complex with a VgrG-like beta-helix that is based on a fragment of T4 gp5
分子名称: CHLORIDE ION, MAGNESIUM ION, Putative uncharacterized protein, ...
著者Buth, S.A, Leiman, P.G, Shneider, M.M.
登録日2013-03-07
公開日2013-08-14
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.402 Å)
主引用文献PAAR-repeat proteins sharpen and diversify the type VI secretion system spike.
Nature, 500, 2013
4JK5
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BU of 4jk5 by Molmil
Human urokinase-type Plasminogen Activator (uPA) in complex with a bicyclic peptide inhibitor (UK18-D-Ser)
分子名称: 1,3,5-tris(bromomethyl)benzene, CHLORIDE ION, HEXAETHYLENE GLYCOL, ...
著者Buth, S.A, Leiman, P.G, Chen, S, Heinis, C.
登録日2013-03-09
公開日2013-07-17
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Improving binding affinity and stability of Peptide ligands by substituting glycines with d-amino acids.
Chembiochem, 14, 2013
4MTK
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BU of 4mtk by Molmil
Crystal structure of PA0091 VgrG1, the central spike of the Type VI Secretion System
分子名称: SULFATE ION, TRIS(HYDROXYETHYL)AMINOMETHANE, VgrG1
著者Sycheva, L.V, Shneider, M.M, Leiman, P.G.
登録日2013-09-19
公開日2014-10-01
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.322 Å)
主引用文献The conserved architecture of the T6SS central spike complex
To be Published
4MTM
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BU of 4mtm by Molmil
Crystal structure of the tail fiber gp53 from Acinetobacter baumannii bacteriophage AP22
分子名称: 1,2-ETHANEDIOL, BROMIDE ION, GLYCEROL, ...
著者Sycheva, L.V, Shneider, M.M, Leiman, P.G.
登録日2013-09-19
公開日2014-10-01
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.368 Å)
主引用文献Crystal Structure of the putative tail fiber protein gp53 from the Acinetobacter baumannii bacteriophage AP22
Biorxiv, 2019
3H2T
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BU of 3h2t by Molmil
Crystal structure of gene product 6, baseplate protein of bacteriophage T4
分子名称: Baseplate structural protein Gp6
著者Aksyuk, A.A, Leiman, P.G, Shneider, M.M, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2009-04-14
公開日2009-05-19
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献The structure of gene product 6 of bacteriophage t4, the hinge-pin of the baseplate.
Structure, 17, 2009
3H3Y
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BU of 3h3y by Molmil
Fitting of the gp6 crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 star-shaped baseplate
分子名称: Baseplate structural protein Gp6
著者Aksyuk, A.A, Leiman, P.G, Shneider, M.M, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2009-04-17
公開日2009-05-19
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (16 Å)
主引用文献The structure of gene product 6 of bacteriophage T4, the hinge-pin of the baseplate.
Structure, 17, 2009
3H3W
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BU of 3h3w by Molmil
Fitting of the gp6 crystal structure into 3D cryo-EM reconstruction of bacteriophage T4 dome-shaped baseplate
分子名称: Baseplate structural protein Gp6
著者Aksyuk, A.A, Leiman, P.G, Shneider, M.M, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2009-04-17
公開日2009-05-19
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (12 Å)
主引用文献The structure of gene product 6 of bacteriophage T4, the hinge-pin of the baseplate.
Structure, 17, 2009

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