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1PF5
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Structural Genomics, Protein YJGH
分子名称: Hypothetical protein yjgH, MERCURY (II) ION
著者Zhang, R, Joachimiak, A, Edwards, A, Savchenko, A, Xu, L, Midwest Center for Structural Genomics (MCSG)
登録日2003-05-23
公開日2003-12-09
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The 2.5A crystal structure of protein YJGH from E. Coli
To be Published
5U3F
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BU of 5u3f by Molmil
Structure of Mycobacterium tuberculosis IlvE, a branched-chain amino acid transaminase, in complex with D-cycloserine derivative
分子名称: (5-hydroxy-6-methyl-4-{[(3-oxo-2,3-dihydro-1,2-oxazol-4-yl)amino]methyl}pyridin-3-yl)methyl dihydrogen phosphate, Branched-chain-amino-acid aminotransferase
著者Favrot, L, Amorim Franco, T.M, Blanchard, J.S.
登録日2016-12-02
公開日2017-03-22
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.695 Å)
主引用文献Mechanism-Based Inhibition of the Mycobacterium tuberculosis Branched-Chain Aminotransferase by d- and l-Cycloserine.
ACS Chem. Biol., 12, 2017
5U4H
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BU of 5u4h by Molmil
1.05 Angstrom Resolution Crystal Structure of UDP-N-acetylglucosamine 1-carboxyvinyltransferase from Acinetobacter baumannii in Covalently Bound Complex with (2R)-2-(phosphonooxy)propanoic Acid.
分子名称: (2R)-2-(phosphonooxy)propanoic acid, FORMIC ACID, SODIUM ION, ...
著者Minasov, G, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Grimshaw, S, Kwon, K, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-12-04
公開日2016-12-14
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献1.05 Angstrom Resolution Crystal Structure of UDP-N-acetylglucosamine 1-carboxyvinyltransferase from Acinetobacter baumannii in Covalently Bound Complex with (2R)-2-(phosphonooxy)propanoic Acid.
To Be Published
7QUW
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BU of 7quw by Molmil
CVB3-3Cpro in complex with inhibitor MG-78
分子名称: (1R,2S,5S)-N-{(2S,3R)-4-amino-3-hydroxy-4-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]butan-2-yl}-3-[N-(tert-butylcarbamoyl)-3-methyl-L-valyl]-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide, Protease 3C
著者Zhang, L, Hilgenfeld, R.
登録日2022-01-19
公開日2022-03-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献From Repurposing to Redesign: Optimization of Boceprevir to Highly Potent Inhibitors of the SARS-CoV-2 Main Protease.
Molecules, 27, 2022
1PIG
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BU of 1pig by Molmil
PIG PANCREATIC ALPHA-AMYLASE COMPLEXED WITH THE OLIGOSACCHARIDE V-1532
分子名称: 4-amino-4,6-dideoxy-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, 4-amino-4,6-dideoxy-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-beta-D-glucopyranose, 5-HYDROXYMETHYL-CHONDURITOL, ...
著者Machius, M, Vertesy, L, Huber, R, Wiegand, G.
登録日1996-06-15
公開日1996-12-07
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Carbohydrate and protein-based inhibitors of porcine pancreatic alpha-amylase: structure analysis and comparison of their binding characteristics.
J.Mol.Biol., 260, 1996
1K3G
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BU of 1k3g by Molmil
NMR Solution Structure of Oxidized Cytochrome c-553 from Bacillus pasteurii
分子名称: HEME C, cytochrome c-553
著者Banci, L, Bertini, I, Ciurli, S, Dikiy, A, Dittmer, J, Rosato, A, Sciara, G, Thompsett, A.R.
登録日2001-10-03
公開日2001-10-31
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献NMR solution structure, backbone mobility, and homology modeling of c-type cytochromes from gram-positive bacteria.
Chembiochem, 3, 2002
4DHP
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BU of 4dhp by Molmil
Small-molecule inhibitors of 14-3-3 protein-protein interactions from virtual screening
分子名称: 14-3-3 protein sigma, CHLORIDE ION, GLYCEROL, ...
著者Thiel, P, Roeglin, L, Kohlbacher, O, Ottmann, C.
登録日2012-01-30
公開日2013-07-31
最終更新日2013-09-04
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Virtual screening and experimental validation reveal novel small-molecule inhibitors of 14-3-3 protein-protein interactions.
Chem.Commun.(Camb.), 49, 2013
5U1S
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BU of 5u1s by Molmil
Crystal structure of the Saccharomyces cerevisiae separase-securin complex at 3.0 angstrom resolution
分子名称: Securin, Separin
著者Luo, S, Tong, L.
登録日2016-11-29
公開日2017-02-08
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (3.002 Å)
主引用文献Molecular mechanism for the regulation of yeast separase by securin.
Nature, 542, 2017
1PG7
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BU of 1pg7 by Molmil
Murine 6A6 Fab in complex with humanized anti-Tissue Factor D3H44 Fab
分子名称: humanized antibody D3H44, murine antibody 6A6 Fab fragment
著者Eigenbrot, C, Meng, Y.G, Krishnamurthy, R, Lipari, M.T, Presta, L, Devaux, B, Wong, T, Moran, P, Bullens, S, Kirchhofer, D.
登録日2003-05-27
公開日2003-08-26
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural insight into how an anti-idiotypic antibody against D3H44 (anti-tissue factor antibody) restores normal coagulation.
J.Mol.Biol., 331, 2003
1PGV
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BU of 1pgv by Molmil
Structural Genomics of Caenorhabditis elegans: tropomodulin C-terminal domain
分子名称: tropomodulin TMD-1
著者Symersky, J, Lu, S, Li, S, Chen, L, Meehan, E, Luo, M, Qiu, S, Bunzel, R.J, Luo, D, Arabashi, A, Nagy, L.A, Lin, G, Luan, W.C.-H, Carson, M, Gray, R, Huang, W, Southeast Collaboratory for Structural Genomics (SECSG)
登録日2003-05-28
公開日2003-06-10
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural genomics of Caenorhabditis elegans: crystal structure of the tropomodulin C-terminal domain
Proteins, 56, 2004
5TVY
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BU of 5tvy by Molmil
Computationally Designed Fentanyl Binder - Fen49
分子名称: 3,6,9,12,15,18,21,24,27-NONAOXANONACOSANE-1,29-DIOL, Endo-1,4-beta-xylanase A
著者Bick, M.J, Greisen, P.J, Morey, K.J, Antunes, M.S, La, D, Sankaran, B, Reymond, L, Johnsson, K, Medford, J.I, Baker, D.
登録日2016-11-10
公開日2017-10-04
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Computational design of environmental sensors for the potent opioid fentanyl.
Elife, 6, 2017
5TW9
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BU of 5tw9 by Molmil
1.50 Angstrom Crystal Structure of C-terminal Fragment (residues 322-384) of Iron Uptake System Component EfeO from Yersinia pestis.
分子名称: 1,2-ETHANEDIOL, IODIDE ION, Iron uptake system component EfeO
著者Minasov, G, Shuvalova, L, Flores, K, Dubrovska, I, Grimshaw, S, Kwon, K, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2016-11-11
公開日2016-11-30
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献1.50 Angstrom Crystal Structure of C-terminal Fragment (residues 322-384) of Iron Uptake System Component EfeO from Yersinia pestis.
To Be Published
5U0P
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BU of 5u0p by Molmil
Cryo-EM structure of the transcriptional Mediator
分子名称: Mediator complex subunit 10, Mediator complex subunit 11, Mediator complex subunit 14, ...
著者Tsai, K.-L, Yu, X, Gopalan, S, Chao, T.-C, Zhang, Y, Florens, L, Washburn, M.P, Murakami, K, Conaway, R.C, Conaway, J.W, Asturias, F.
登録日2016-11-26
公開日2017-03-08
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Mediator structure and rearrangements required for holoenzyme formation.
Nature, 544, 2017
6EYM
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BU of 6eym by Molmil
Neutron crystal structure of perdeuterated galectin-3C in complex with lactose
分子名称: Galectin-3, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Manzoni, F, Coates, L, Blakeley, M.P, Oksanen, E, Logan, D.T.
登録日2017-11-13
公開日2018-09-12
最終更新日2024-05-01
実験手法NEUTRON DIFFRACTION (1.7 Å), X-RAY DIFFRACTION
主引用文献Elucidation of Hydrogen Bonding Patterns in Ligand-Free, Lactose- and Glycerol-Bound Galectin-3C by Neutron Crystallography to Guide Drug Design.
J. Med. Chem., 61, 2018
1KIO
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BU of 1kio by Molmil
SOLUTION STRUCTURE OF THE SMALL SERINE PROTEASE INHIBITOR SGCI[L30R, K31M]
分子名称: SERINE PROTEASE INHIBITOR I
著者Gaspari, Z, Patthy, A, Graf, L, Perczel, A.
登録日2001-12-03
公開日2001-12-12
最終更新日2021-10-27
実験手法SOLUTION NMR
主引用文献Comparative structure analysis of proteinase inhibitors from the desert locust, Schistocerca gregaria.
Eur.J.Biochem., 269, 2002
1PDV
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BU of 1pdv by Molmil
Crystal structure of human DJ-1, P 31 2 1 space group
分子名称: DJ-1
著者Tao, X, Tong, L.
登録日2003-05-20
公開日2003-06-24
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure of Human DJ-1, a Protein Associated with Early Onset Parkinson's Disease.
J.Biol.Chem., 278, 2003
1PDW
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BU of 1pdw by Molmil
Crystal structure of human DJ-1, P 1 21 1 space group
分子名称: DJ-1
著者Tao, X, Tong, L.
登録日2003-05-20
公開日2003-06-24
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of Human DJ-1, a Protein Associated with Early Onset Parkinson's Disease.
J.Biol.Chem., 278, 2003
5UCA
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BU of 5uca by Molmil
Crystal structure of human Heme Oxygenase-2 in complex with Laurate
分子名称: Heme oxygenase 2, LAURIC ACID
著者Luo, S, Tong, L.
登録日2016-12-22
公開日2017-02-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.117 Å)
主引用文献Heme Oxygenase 2 Binds Myristate to Regulate Retrovirus Assembly and TLR4 Signaling.
Cell Host Microbe, 21, 2017
1I9E
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BU of 1i9e by Molmil
TCR DOMAIN
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CYTOTOXIC TCELL VALPHA DOMAIN
著者Rudolph, M.G, Huang, M, Teyton, L, Wilson, I.A.
登録日2001-03-19
公開日2001-12-05
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of an isolated V(alpha) domain of the 2C T-cell receptor.
J.Mol.Biol., 314, 2001
7QFX
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BU of 7qfx by Molmil
Crystal structure of Old Yellow Enzyme AnOYE8 from Aspergillus niger
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, FLAVIN MONONUCLEOTIDE, NADH-dependent flavin oxidoreductase, ...
著者Robescu, M.S, Loprete, G, Vascon, F, Gasparotto, M, Filippini, F, Bergantino, E, Cendron, L.
登録日2021-12-06
公開日2022-04-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The Family Keeps on Growing: Four Novel Fungal OYEs Characterized.
Int J Mol Sci, 23, 2022
6F6T
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BU of 6f6t by Molmil
Phenylalanine ammonia-lyase (PAL) from Petroselinum crispum complexed with S-APPA
分子名称: (S)-(1-amino-2phenylallyl)phosphonic acid, Phenylalanine ammonia-lyase 1
著者Bata, Z, Leveles, I, Vertessy, G.B, Poppe, L.
登録日2017-12-06
公開日2019-06-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.89995968 Å)
主引用文献Substrate Tunnel Engineering Aided by X-ray Crystallography and Functional Dynamics Swaps the Function of MIO-Enzymes
Acs Catalysis, 2021
1PJ0
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BU of 1pj0 by Molmil
RIBONUCLEOTIDE REDUCTASE R2-D84E/W48F MUTANT SOAKED WITH FERROUS IONS AT NEUTRAL PH
分子名称: FE (III) ION, MERCURY (II) ION, Ribonucleoside-diphosphate reductase 1 beta chain
著者Voegtli, W.C, Sommerhalter, M, Saleh, L, Baldwin, J, Bollinger Jr, J.M, Rosenzweig, A.C.
登録日2003-05-30
公開日2004-01-13
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Variable coordination geometries at the diiron(II) active site of ribonucleotide reductase R2.
J.Am.Chem.Soc., 125, 2003
7QYN
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Mus musculus acetylcholinesterase in complex with 2-((hydroxyimino)methyl)-1-(5-(4-methyl-3-nitrobenzamido)pentyl)pyridinium
分子名称: 2,5,8,11,14,17-HEXAOXANONADECAN-19-OL, 2-(2-METHOXYETHOXY)ETHANOL, 2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXYL, ...
著者Forsgren, N, Lindgren, C, Edvinsson, L, Linusson, A, Ekstrom, F.
登録日2022-01-28
公開日2022-04-27
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Broad-Spectrum Antidote Discovery by Untangling the Reactivation Mechanism of Nerve-Agent-Inhibited Acetylcholinesterase.
Chemistry, 28, 2022
1I3V
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THREE-DIMENSIONAL STRUCTURE OF A LAMA VHH DOMAIN UNLIGANDED
分子名称: ANTIBODY VHH LAMA DOMAIN
著者Spinelli, S, Tegoni, M, Frenken, L, van Vliet, C, Cambillau, C.
登録日2001-02-16
公開日2001-08-08
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Lateral recognition of a dye hapten by a llama VHH domain.
J.Mol.Biol., 311, 2001
1PIZ
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RIBONUCLEOTIDE REDUCTASE R2 D84E MUTANT SOAKED WITH FERROUS IONS AT NEUTRAL PH
分子名称: FE (III) ION, MERCURY (II) ION, Ribonucleoside-diphosphate reductase 1 beta chain
著者Voegtli, W.C, Sommerhalter, M, Saleh, L, Baldwin, J, Bollinger Jr, J.M, Rosenzweig, A.C.
登録日2003-05-30
公開日2004-01-13
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Variable coordination geometries at the diiron(II) active site of ribonucleotide reductase R2.
J.Am.Chem.Soc., 125, 2003

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