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6K4K
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BU of 6k4k by Molmil
Crystal structure of SidJ-CaM binary complex at 2.71 A
分子名称: CALCIUM ION, Calmodulin-1, SidJ
著者Ouyang, S.Y.
登録日2019-05-24
公開日2019-07-24
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.715 Å)
主引用文献Regulation of phosphoribosyl ubiquitination by a calmodulin-dependent glutamylase.
Nature, 572, 2019
6JUA
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BU of 6jua by Molmil
Aspergillus oryzae pro-tyrosinase oxygen-bound C92A mutant
分子名称: COPPER (II) ION, PEROXIDE ION, Tyrosinase
著者Fujieda, N, Umakoshi, K, Nishikawa, Y, Kurisu, G, Itoh, S.
登録日2019-04-13
公開日2020-05-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Copper-Oxygen Dynamics in the Tyrosinase Mechanism.
Angew.Chem.Int.Ed.Engl., 59, 2020
7EU9
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BU of 7eu9 by Molmil
Crystal structure of the selenomethionine(SeMet)-derived Cas12i1 R-loop complex before target DNA cleavage
分子名称: CITRIC ACID, Cas12i1 D647A mutant, DNA (24-MER), ...
著者Zhang, B, Luo, D.Y, Li, Y, OuYang, S.Y.
登録日2021-05-16
公開日2021-05-26
最終更新日2021-06-23
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Mechanistic insights into the R-loop formation and cleavage in CRISPR-Cas12i1.
Nat Commun, 12, 2021
7FAY
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BU of 7fay by Molmil
Crystal structure of SARS-CoV-2 main protease in complex with (R)-1a
分子名称: (2~{R})-~{N}-[(1~{R})-2-(~{tert}-butylamino)-2-oxidanylidene-1-pyridin-3-yl-ethyl]-~{N}-(4-~{tert}-butylphenyl)-2-oxidanyl-propanamide, 3C-like proteinase
著者Zeng, R, Quan, B.X, Liu, X.L, Lei, J.
登録日2021-07-08
公開日2021-07-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献An orally available M pro inhibitor is effective against wild-type SARS-CoV-2 and variants including Omicron.
Nat Microbiol, 7, 2022
7FAZ
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BU of 7faz by Molmil
Crystal structure of the SARS-CoV-2 main protease in complex with Y180
分子名称: (2~{R})-~{N}-dibenzofuran-3-yl-~{N}-[(1~{R})-2-[[(1~{S})-1-(4-fluorophenyl)ethyl]amino]-2-oxidanylidene-1-pyridin-3-yl-ethyl]-2-oxidanyl-propanamide, 3C-like proteinase, SODIUM ION
著者Zeng, R, Quan, B.X, Liu, X.L, Lei, J.
登録日2021-07-08
公開日2021-07-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献An orally available M pro inhibitor is effective against wild-type SARS-CoV-2 and variants including Omicron.
Nat Microbiol, 7, 2022
6JU4
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BU of 6ju4 by Molmil
Aspergillus oryzae pro-tyrosinase F513Y mutant
分子名称: COPPER (II) ION, Tyrosinase
著者Fujieda, N, Umakoshi, K, Nishikawa, Y, Kurisu, G, Itoh, S.
登録日2019-04-13
公開日2020-05-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Copper-Oxygen Dynamics in the Tyrosinase Mechanism.
Angew.Chem.Int.Ed.Engl., 59, 2020
6CG7
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BU of 6cg7 by Molmil
mouse cadherin-22 EC1-2 adhesive fragment
分子名称: CALCIUM ION, Cadherin-22
著者Brasch, J, Harrison, O.J, Shapiro, L.
登録日2018-02-19
公開日2018-05-09
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.705 Å)
主引用文献Homophilic and Heterophilic Interactions of Type II Cadherins Identify Specificity Groups Underlying Cell-Adhesive Behavior.
Cell Rep, 23, 2018
1A4Q
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BU of 1a4q by Molmil
INFLUENZA VIRUS B/BEIJING/1/87 NEURAMINIDASE COMPLEXED WITH DIHYDROPYRAN-PHENETHYL-PROPYL-CARBOXAMIDE
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 5-ACETYLAMINO-4-AMINO-6-(PHENETHYL-PROPYL-CARBAMOYL)-5,6-DIHYDRO-4H-PYRAN-2-CARBOXYLIC ACID, CALCIUM ION, ...
著者Cleasby, A, Singh, O, Skarzynski, T, Wonacott, A.J.
登録日1998-01-30
公開日1999-03-02
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Dihydropyrancarboxamides related to zanamivir: a new series of inhibitors of influenza virus sialidases. 2. Crystallographic and molecular modeling study of complexes of 4-amino-4H-pyran-6-carboxamides and sialidase from influenza virus types A and B.
J.Med.Chem., 41, 1998
6KSF
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BU of 6ksf by Molmil
Crystal Structure of ALKBH1 bound to 21-mer DNA bulge
分子名称: Alpha-ketoglutarate-dependent dioxygenase alkB homolog 1, CHLORIDE ION, DNA (5'-D(*DGP*DCP*DTP*DGP*DAP*DGP*DTP*DGP*DCP*DCP*DCP*DGP*DCP*DGP*DTP*DGP*DCP*DTP*DGP*DGP*DAP*DTP*DCP*DC)-3'), ...
著者Li, H, Zhang, M.
登録日2019-08-23
公開日2020-04-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Mammalian ALKBH1 serves as an N6-mA demethylase of unpairing DNA.
Cell Res., 30, 2020
8FA3
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BU of 8fa3 by Molmil
Structure of N-terminal of Schistosoma japonicum asparaginyl-tRNA synthetase
分子名称: Asparagine--tRNA ligase
著者Peck, Y, Daly, N.L, Mobli, M.
登録日2022-11-25
公開日2023-09-06
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of the N-terminal extension domain of a Schistosoma japonicum asparaginyl-tRNA synthetase.
J.Biomol.Struct.Dyn., 2023
4PW8
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BU of 4pw8 by Molmil
Human tryptophan 2,3-dioxygenase
分子名称: COBALT (II) ION, Tryptophan 2,3-dioxygenase
著者Meng, B, Wu, D, Gu, J.H, Ouyang, S.Y, Ding, W, Liu, Z.J.
登録日2014-03-19
公開日2014-08-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.902 Å)
主引用文献Structural and functional analyses of human tryptophan 2,3-dioxygenase
Proteins, 82, 2014
3TPU
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BU of 3tpu by Molmil
42F3 p5E8/H2-Ld complex
分子名称: 1,2-ETHANEDIOL, 42F3 alpha, 42F3 beta, ...
著者Adams, J.J, Kranz, D.M, Garcia, K.C.
登録日2011-09-08
公開日2011-12-07
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献T cell receptor signaling is limited by docking geometry to peptide-major histocompatibility complex.
Immunity, 35, 2011
3SVR
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BU of 3svr by Molmil
Crystal structure of mkate mutant S158A/S143C at pH 7.5
分子名称: mkate S158A/S143C
著者Wang, Q, Byrnes, L, Sondermann, H.
登録日2011-07-12
公開日2011-09-14
実験手法X-RAY DIFFRACTION (1.907 Å)
主引用文献Molecular Mechanism of a Green-Shifted, pH-Dependent Red Fluorescent Protein mKate Variant.
Plos One, 6, 2011
3SVN
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BU of 3svn by Molmil
Crystal structure of mKate S158A mutant at pH 7.5
分子名称: mKate
著者Wang, Q, Byrnes, L, Sondermann, H.
登録日2011-07-12
公開日2011-09-14
実験手法X-RAY DIFFRACTION (1.899 Å)
主引用文献Molecular Mechanism of a Green-Shifted, pH-Dependent Red Fluorescent Protein mKate Variant.
Plos One, 6, 2011
3SVU
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BU of 3svu by Molmil
Crystal structure of mKate mutant S143C
分子名称: mkate S143C
著者Wang, Q, Byrnes, L, Sondermann, H.
登録日2011-07-12
公開日2011-09-14
実験手法X-RAY DIFFRACTION (2.695 Å)
主引用文献Molecular Mechanism of a Green-Shifted, pH-Dependent Red Fluorescent Protein mKate Variant.
Plos One, 6, 2011
3SVS
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BU of 3svs by Molmil
Crystal structure of mkate mutant S158A/S143C at pH 4.0
分子名称: mKate S158A/S143C
著者Wang, Q, Bynres, L, Sondermann, H.
登録日2011-07-12
公開日2011-09-14
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Molecular Mechanism of a Green-Shifted, pH-Dependent Red Fluorescent Protein mKate Variant.
Plos One, 6, 2011
3SVO
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BU of 3svo by Molmil
Crystal structure of mKate mutant S158A/S143C at pH 10.0
分子名称: mKate S158A/S143C
著者Wang, Q, Byrnes, L, Sondermann, H.
登録日2011-07-12
公開日2011-09-14
実験手法X-RAY DIFFRACTION (1.984 Å)
主引用文献Molecular Mechanism of a Green-Shifted, pH-Dependent Red Fluorescent Protein mKate Variant.
Plos One, 6, 2011
2FT6
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BU of 2ft6 by Molmil
Structure of Cu(II)azurin with the metal-binding loop sequence "CTFPGHSALM" replaced with "CTPHPM"
分子名称: Azurin, COPPER (II) ION
著者Banfield, M.J.
登録日2006-01-24
公開日2006-04-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Basic requirements for a metal-binding site in a protein: The influence of loop shortening on the cupredoxin azurin.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2FT8
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BU of 2ft8 by Molmil
Structure of Cu(I)azurin, pH8, with the metal-binding loop sequence "CTFPGHSALM" replaced with "CTPHPM"
分子名称: Azurin, COPPER (I) ION
著者Banfield, M.J.
登録日2006-01-24
公開日2006-04-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Basic requirements for a metal-binding site in a protein: The influence of loop shortening on the cupredoxin azurin.
Proc.Natl.Acad.Sci.Usa, 103, 2006
7YQT
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BU of 7yqt by Molmil
SARS-CoV-2 BA.2.75 S Trimer (1 RBD Up)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Wang, L.
登録日2022-08-08
公開日2022-10-19
最終更新日2022-11-23
実験手法ELECTRON MICROSCOPY (3.45 Å)
主引用文献Characterization of the enhanced infectivity and antibody evasion of Omicron BA.2.75.
Cell Host Microbe, 30, 2022
7YR3
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BU of 7yr3 by Molmil
SARS-CoV-2 BA.2.75 S Trimer in complex with ACE2(state2)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
著者Wang, L.
登録日2022-08-08
公開日2022-10-19
最終更新日2022-11-23
実験手法ELECTRON MICROSCOPY (3.52 Å)
主引用文献Characterization of the enhanced infectivity and antibody evasion of Omicron BA.2.75.
Cell Host Microbe, 30, 2022
7YQV
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BU of 7yqv by Molmil
pH 5.5 SARS-CoV-2 BA.2.75 S Trimer (1 RBD Up)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
著者Wang, L.
登録日2022-08-08
公開日2022-10-19
最終更新日2022-11-23
実験手法ELECTRON MICROSCOPY (3.58 Å)
主引用文献Characterization of the enhanced infectivity and antibody evasion of Omicron BA.2.75.
Cell Host Microbe, 30, 2022
7YR1
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BU of 7yr1 by Molmil
SARS-CoV-2 BA.2.75 S Trimer in complex with XG2v024
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
著者Wang, L.
登録日2022-08-08
公開日2022-10-19
最終更新日2022-11-23
実験手法ELECTRON MICROSCOPY (3.62 Å)
主引用文献Characterization of the enhanced infectivity and antibody evasion of Omicron BA.2.75.
Cell Host Microbe, 30, 2022
2FT7
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BU of 2ft7 by Molmil
Structure of Cu(I)azurin at pH 6, with the metal-binding loop sequence "CTFPGHSALM" replaced with "CTPHPM"
分子名称: Azurin, COPPER (I) ION
著者Banfield, M.J.
登録日2006-01-24
公開日2006-04-11
最終更新日2017-10-18
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Basic requirements for a metal-binding site in a protein: The influence of loop shortening on the cupredoxin azurin.
Proc.Natl.Acad.Sci.Usa, 103, 2006
2FTA
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BU of 2fta by Molmil
Structure of Cu(II)azurin with the metal-binding loop sequence "CTFPGHSALM" replaced with "CTPHPFM"
分子名称: Azurin, COPPER (II) ION, DI(HYDROXYETHYL)ETHER, ...
著者Banfield, M.J.
登録日2006-01-24
公開日2006-04-11
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Basic requirements for a metal-binding site in a protein: The influence of loop shortening on the cupredoxin azurin.
Proc.Natl.Acad.Sci.Usa, 103, 2006

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